RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 OSBPL9Q96SU4 736 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 ADOQ96SZ5 270 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 RBBP8Q99708 897 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 CPNE1Q99829 537 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 LRRC1Q9BTT6 524 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 SLCO5A1Q9H2Y9 848 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 YAE1D1Q9NRH1 226 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 BCAP29Q9UHQ4 241 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 CDC42EP3Q9UKI2 254 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 PROCRQ9UNN8 238 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 GPR55Q9Y2T6 319 aaPredicted RBP4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 RNF11Q9Y3C5 154 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 MAGED1Q9Y5V3 778 aaPredicted RBP4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 ALPK2Q86TB3 2170 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 A0A096LNT2 108 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 C1orf226A1L170 272 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 OR2M5A3KFT3 312 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 GOLGA6L10A6NI86 522 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 FAM159BA6NKW6 160 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 SHISA8B8ZZ34 492 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 H3BML4 177 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 ADAM11O75078 769 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 SS18L1O75177 396 aaPredicted RBP4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 NDUFS7O75251 213 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 NME6O75414 186 aaPredicted RBP4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 REM1O75628 298 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 PROCP04070 461 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 ALDOAP04075 364 aaKnown RBP4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 KLK1P06870 262 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 FCGR2AP12318 317 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 PSMB1P20618 241 aaKnown RBP4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 IL12BP29460 328 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 EVI2BP34910 448 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 IDUAP35475 653 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 CDKN1AP38936 164 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 GP5P40197 560 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 SLC6A8P48029 635 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 PIK3CGP48736 1102 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 MAPK12P53778 367 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 CORO7P57737 925 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 EEFSECP57772 596 aaKnown RBP4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 MRPS35P82673 323 aaKnown RBP4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 OCRLQ01968 901 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 EFR3AQ14156 821 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 GANABQ14697 944 aaKnown RBP4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 TRMT12Q53H54 448 aaKnown RBP4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 OXLD1Q5BKU9 147 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 FAM180BQ6P0A1 224 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 FIGNL1Q6PIW4 674 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 LARP4Q71RC2 724 aaKnown RBP eCLIP4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 GOLGA7Q7Z5G4 137 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 GGNQ86UU5 652 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 WFDC8Q8IUA0 241 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 ZBED8Q8IZ13 594 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 CENPLQ8N0S6 344 aaPredicted RBP4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 L3MBTL4Q8NA19 623 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 OR2M3Q8NG83 312 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 OR5M1Q8NGP8 315 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 NEUROG1Q92886 237 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 FBXW5Q969U6 566 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 EFHD2Q96C19 240 aaPredicted RBP4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 CNRIP1Q96F85 164 aaPredicted RBP4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 TRMT61AQ96FX7 289 aaKnown RBP4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 VSTM2LQ96N03 204 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 ZNF681Q96N22 645 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 SERPINI1Q99574 410 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 C19orf24Q9BVV8 132 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 MRPL1Q9BYD6 325 aaKnown RBP4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 ACTR6Q9GZN1 396 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 OR10A4Q9H209 315 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 DSN1Q9H410 356 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 ANKRA2Q9H9E1 313 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 NMRAL1Q9HBL8 299 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 ZBTB26Q9HCK0 441 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 SAYSD1Q9NPB0 183 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 PLSCR4Q9NRQ2 329 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 TXNDC16Q9P2K2 825 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 LPAR3Q9UBY5 353 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 PRODH2Q9UF12 536 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 ADAM29Q9UKF5 820 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 CLEC4AQ9UMR7 237 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 LIPT1Q9Y234 373 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 PPP2R2CQ9Y2T4 447 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 ACOT9Q9Y305 439 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 EMC9Q9Y3B6 208 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 ZNF337Q9Y3M9 751 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 RNF115Q9Y4L5 304 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 ANGPTL3Q9Y5C1 460 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 PCDHA9Q9Y5H5 950 aa4.59□□□□□ -1.67
SNRNP40-204ENST00000474025 IGHV4-30-2A0A087WSY4 118 aa4.58□□□□□ -1.68
SNRNP40-204ENST00000474025 TCRBV9S1A1TA0A576 114 aa4.58□□□□□ -1.68
SNRNP40-204ENST00000474025 SYCE1LA8MT33 242 aa4.58□□□□□ -1.68
SNRNP40-204ENST00000474025 GOLGA6L6A8MZA4 724 aa4.58□□□□□ -1.68
SNRNP40-204ENST00000474025 LINC01387J3KSC0 135 aa4.58□□□□□ -1.68
SNRNP40-204ENST00000474025 OR7A17O14581 309 aa4.58□□□□□ -1.68
SNRNP40-204ENST00000474025 CLOCKO15516 846 aa4.58□□□□□ -1.68
SNRNP40-204ENST00000474025 SPRY1O43609 319 aaPredicted RBP4.58□□□□□ -1.68
SNRNP40-204ENST00000474025 SCO2O43819 266 aa4.58□□□□□ -1.68
SNRNP40-204ENST00000474025 GPRIN2O60269 458 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms