RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 PIK3R3Q92569 461 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 SLC9A6Q92581 669 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 JADE3Q92613 823 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 TESCQ96BS2 214 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 OTUB1Q96FW1 271 aaPredicted RBP11.79□□□□□ -0.52
COL5A1-206ENST00000465877 RMND5BQ96G75 393 aaPredicted RBP11.79□□□□□ -0.52
COL5A1-206ENST00000465877 PSMG3-AS1Q96PY0 264 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 ACBD3Q9H3P7 528 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 LDAHQ9H6V9 325 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 INTS9Q9NV88 658 aaKnown RBP11.79□□□□□ -0.52
COL5A1-206ENST00000465877 SPRR3Q9UBC9 169 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 ABCG2Q9UNQ0 655 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 A0A1B0GVC2 190 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 OR14I1A6ND48 311 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 NPIPA2E9PIF3 369 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 NPIPA3F8WFD2 350 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 RNASET2O00584 256 aaKnown RBP11.78□□□□□ -0.52
COL5A1-206ENST00000465877 CFLARO15519 480 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 SCO2O43819 266 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 SUSD5O60279 629 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 HCN1O60741 890 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 IL33O95760 270 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 HMGN2P05204 90 aaKnown RBP11.78□□□□□ -0.52
COL5A1-206ENST00000465877 HPNP05981 417 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 PTPN6P29350 595 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 GABRA3P34903 492 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 MAN2A2P49641 1150 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 PSMD4P55036 377 aaKnown RBP11.78□□□□□ -0.52
COL5A1-206ENST00000465877 WNT3P56703 355 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 HBA1P69905 142 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 SLC10A1Q14973 349 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 DUSP5Q16690 384 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 SPDYE7PQ495Y7 208 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 SPANXN4Q5MJ08 99 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 EXOSC6Q5RKV6 272 aaKnown RBP11.78□□□□□ -0.52
COL5A1-206ENST00000465877 TIGD3Q6B0B8 471 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 NXNQ6DKJ4 435 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 MTFR2Q6P444 385 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 C3P1Q6ZMU1 363 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 SPATA19Q7Z5L4 167 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 DOLPP1Q86YN1 238 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 EID3Q8N140 333 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 COX18Q8N8Q8 333 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 SLC16A11Q8NCK7 471 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 OR1J4Q8NGS1 313 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 OR5AK3PQ8NH89 298 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 GPR151Q8TDV0 419 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 MOAP1Q96BY2 351 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 MARK4Q96L34 752 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 GNRHR2Q96P88 292 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 PHF12Q96QT6 1004 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 TP63Q9H3D4 680 aaPredicted RBP11.78□□□□□ -0.52
COL5A1-206ENST00000465877 EXO5Q9H790 373 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 SLCO1B3Q9NPD5 702 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 ZNF446Q9NWS9 450 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 FLRT3Q9NZU0 649 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 TNFRSF10DQ9UBN6 386 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 MRTO4Q9UKD2 239 aaKnown RBP11.78□□□□□ -0.52
COL5A1-206ENST00000465877 MEMO1Q9Y316 297 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 KIAA1549Q9HCM3 1950 aa11.78□□□□□ -0.52
COL5A1-206ENST00000465877 RNF103-CHMP3A0A140T963 221 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 C2orf72A6NCS6 295 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 C17orf51A8MQB3 221 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 ZNF195O14628 629 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 ADAM10O14672 748 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 BCKDKO14874 412 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 DIAPH2O60879 1101 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 IGKV1D-16P01601 117 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 ALOX5P09917 674 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 ESRRAP11474 423 aaPredicted RBP11.77□□□□□ -0.53
COL5A1-206ENST00000465877 TRPC1P48995 793 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 CCT3P49368 545 aaKnown RBP11.77□□□□□ -0.53
COL5A1-206ENST00000465877 GAS1P54826 345 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 NME5P56597 212 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 UFM1P61960 85 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 ADORA2A-AS1P86434 159 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 TOMM20Q15388 145 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 FAM174BQ3ZCQ3 159 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 EMC4Q5J8M3 183 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 CDC73Q6P1J9 531 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 ZCCHC12Q6PEW1 402 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 RPTNQ6XPR3 784 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 NCCRP1Q6ZVX7 275 aaPredicted RBP11.77□□□□□ -0.53
COL5A1-206ENST00000465877 GALNT10Q86SR1 603 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 ANKRD46Q86W74 232 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 OR4A15Q8NGL6 344 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 NEIL3Q8TAT5 605 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 ACTRT2Q8TDY3 377 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 PHF10Q8WUB8 498 aaKnown RBP11.77□□□□□ -0.53
COL5A1-206ENST00000465877 ITLN2Q8WWU7 325 aaPredicted RBP11.77□□□□□ -0.53
COL5A1-206ENST00000465877 SARAFQ96BY9 339 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 CHMP6Q96FZ7 201 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 C16orf58Q96GQ5 468 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 TEX37Q96LM6 180 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 OR52B2Q96RD2 323 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 DMRTA2Q96SC8 542 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 STACQ99469 402 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 YIPF4Q9BSR8 244 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 ACKR4Q9NPB9 350 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 SERHLQ9NQF3 203 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms