RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 ZNF441Q8N8Z8 693 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 L3MBTL4Q8NA19 623 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 RELL2Q8NC24 303 aaPredicted RBP4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 OR4F6Q8NGB9 312 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 OR4K14Q8NGD5 310 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 RDH11Q8TC12 318 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 SPPL2AQ8TCT8 520 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 SLC44A1Q8WWI5 657 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 TM4SF18Q96CE8 201 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 REPS1Q96D71 796 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 ART5Q96L15 291 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 RILPQ96NA2 401 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 TRIB1Q96RU8 372 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 NODALQ96S42 347 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 HBEGFQ99075 208 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 CENPKQ9BS16 269 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 POLDIP3Q9BY77 421 aaKnown RBP4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 RAB17Q9H0T7 212 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 NXF5Q9H1B4 397 aaKnown RBP4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 POFUT1Q9H488 388 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 ZNF703Q9H7S9 590 aaPredicted RBP4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 ACKR4Q9NPB9 350 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 ZDHHC18Q9NUE0 388 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 LYARQ9NX58 379 aaKnown RBP4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 NINJ2Q9NZG7 142 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 EHD3Q9NZN3 535 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 CNIH4Q9P003 139 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 KCNN3Q9UGI6 736 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 BCAP29Q9UHQ4 241 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 BOKQ9UMX3 212 aaPredicted RBP4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 EDARQ9UNE0 448 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 CAMK2AQ9UQM7 478 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 PLEKHA6Q9Y2H5 1048 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 TSC22D4Q9Y3Q8 395 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 FREM1Q5H8C1 2179 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 ROS1P08922 2347 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 LRBAP50851 2863 aa4.28□□□□□ -1.73
GTF3C3-208ENST00000455546 ALPK2Q86TB3 2170 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 SYNDIG1LA6NDD5 238 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 OR6C76A6NM76 312 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 HSPB2A8KAH6 182 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 C17orf51A8MQB3 221 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 AHRRA9YTQ3 701 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 TRIM49D1C9J1S8 452 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 TP53I11O14683 189 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 UGDHO60701 494 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 ICOSLGO75144 302 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 OR4F21O95013 312 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 SNX4O95219 450 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 CD99P14209 185 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 GABRA1P14867 456 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 PORP16435 677 aaPredicted RBP4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 GPX3P22352 226 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 CD40P25942 277 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 ABCD3P28288 659 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 SDHAP31040 664 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 CEACAM8P31997 349 aaPredicted RBP4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 GALNSP34059 522 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 DEKP35659 375 aaKnown RBP4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 PTGDSP41222 190 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 ALDH9A1P49189 494 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 CDK9P50750 372 aaKnown RBP4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 MAPK12P53778 367 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 RIPPLY3P57055 190 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 MRPS35P82673 323 aaKnown RBP4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 BTKQ06187 659 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 CRYZQ08257 329 aaKnown RBP4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 GALNT1Q10472 559 aaPredicted RBP4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 FOXF2Q12947 444 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 TRAF3Q13114 568 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 LTB4RQ15722 352 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 HSPB2Q16082 182 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 PRICKLE4Q2TBC4 344 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 CR1LQ2VPA4 569 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 SLC25A35Q3KQZ1 300 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 CT83Q5H943 113 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 RIPPLY2Q5TAB7 128 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 FRG2Q64ET8 278 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 VASNQ6EMK4 673 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 OR5M10Q6IEU7 315 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 SCIMPQ6UWF3 145 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 ANGPTL8Q6UXH0 198 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 ZBTB46Q86UZ6 589 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 CDC20BQ86Y33 519 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 METTL4Q8N3J2 472 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 WDSUB1Q8N9V3 476 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 ZNF610Q8N9Z0 462 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 FAM83FQ8NEG4 500 aaPredicted RBP4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 OR52R1Q8NGF1 315 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 OR1J4Q8NGS1 313 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 TRPC4APQ8TEL6 797 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 SELENOMQ8WWX9 145 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 IFT81Q8WYA0 676 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 ANP32BQ92688 251 aaKnown RBP4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 KAT2AQ92830 837 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 ABTB1Q969K4 478 aaPredicted RBP4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 WDYHV1Q96HA8 205 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 C16orf92Q96LL3 132 aa4.27□□□□□ -1.73
GTF3C3-208ENST00000455546 FRG2BQ96QU4 278 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms