RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 KCMF1Q9P0J7 381 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 ICKQ9UPZ9 632 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 NPIPA2E9PIF3 369 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 NPIPA3F8WFD2 350 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 CSNK2A1P68400 391 aaPredicted RBP11.42□□□□□ -0.58
UBR4-205ENST00000417040 KIAA1211LQ6NV74 962 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 COMMD6Q7Z4G1 85 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 CSNK2A3Q8NEV1 391 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 OR1F2PQ96R84 312 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 MICU1Q9BPX6 476 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 MFFQ9GZY8 342 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 KATNBL1Q9H079 304 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 MYNNQ9NPC7 610 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 DCAF13Q9NV06 445 aaKnown RBP11.42□□□□□ -0.58
UBR4-205ENST00000417040 INSL5Q9Y5Q6 135 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 BRINP1O60477 761 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 SLC10A3P09131 477 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 ARHGAP11AQ6P4F7 1023 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 TOMM40LQ969M1 308 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 TSACCQ96A04 125 aaPredicted RBP11.42□□□□□ -0.58
UBR4-205ENST00000417040 PTCHD1Q96NR3 888 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 RIMBP3CA6NJZ7 1639 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 RIMBP3BA6NNM3 1639 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 RIMBP3Q9UFD9 1639 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 LOC285095A0A1B0GVY8 99 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 A8MVJ9 347 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 GGT2P36268 569 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 ALG10BQ5I7T1 473 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 METTL11BQ5VVY1 283 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 LCN10Q6JVE6 187 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 FAM109AQ8N4B1 249 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 PNPLA2Q96AD5 504 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 SMIM14Q96QK8 99 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 DPH7Q9BTV6 452 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 OR1A2Q9Y585 309 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 FMN2Q9NZ56 1722 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 CFIP05156 583 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 C18orf63Q68DL7 685 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 DPY19L4Q7Z388 723 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 OR9A2Q8NGT5 310 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 C16orf58Q96GQ5 468 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 C4orf36Q96KX1 117 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 G6PC3Q9BUM1 346 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 ASB6Q9NWX5 421 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 FAM183AA6NL82 134 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 SLC16A5O15375 505 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 GPR39O43194 453 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 JRKO75564 520 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 ARAFP10398 606 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 ETV5P41161 510 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 FIP1L1Q6UN15 594 aaKnown RBP11.41□□□□□ -0.58
UBR4-205ENST00000417040 ZNF761Q86XN6 746 aaPredicted RBP11.41□□□□□ -0.58
UBR4-205ENST00000417040 LAX1Q8IWV1 398 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 TRAM1L1Q8N609 369 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 RASD1Q9Y272 281 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 ENPP4Q9Y6X5 453 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 FER1L4A9Z1Z3 1794 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 TCRBV3S1A0A5B6 114 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 CRTAPO75718 401 aaPredicted RBP11.41□□□□□ -0.58
UBR4-205ENST00000417040 BDKRB2P30411 391 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 GPR143P51810 404 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 PRMT2P55345 433 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 CTXN1P60606 82 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 C1orf61Q13536 156 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 EIF2B1Q14232 305 aaKnown RBP11.41□□□□□ -0.58
UBR4-205ENST00000417040 FAM189A2Q15884 450 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 ZNF805Q5CZA5 627 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 LYPD4Q6UWN0 246 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 NRARPQ7Z6K4 114 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 IL17RDQ8NFM7 739 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 TMEM121BQ9BXQ6 578 aaPredicted RBP11.41□□□□□ -0.58
UBR4-205ENST00000417040 ZNF436Q9C0F3 470 aaPredicted RBP11.41□□□□□ -0.58
UBR4-205ENST00000417040 GHRHRQ02643 423 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 DBPQ10586 325 aaPredicted RBP11.41□□□□□ -0.58
UBR4-205ENST00000417040 ZNF559Q9BR84 538 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 PPA2Q9H2U2 334 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 NOX3Q9HBY0 568 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 ZDHHC7Q9NXF8 308 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 ACSL5Q9ULC5 683 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 CYP8B1Q9UNU6 501 aa11.41□□□□□ -0.58
UBR4-205ENST00000417040 C1orf226A1L170 272 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 OR6C65A6NJZ3 312 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 LRRTM2O43300 516 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 HRGP04196 525 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 GALTP07902 379 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 ALDOCP09972 364 aaKnown RBP11.4□□□□□ -0.58
UBR4-205ENST00000417040 NUDT7P0C024 238 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 CAV2P51636 162 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 RPL13AP3Q6NVV1 102 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 SLC9B2Q86UD5 537 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 A0A1W2PP55 124 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 IGLON5A6NGN9 336 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 GSRP00390 522 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 RGS6P49758 472 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 RSU1Q15404 277 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 AKR1C8PQ5T2L2 129 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 ZNF679Q8IYX0 411 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 ARFGAP1Q8N6T3 406 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 MDGA1Q8NFP4 955 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 OR4F15Q8NGB8 312 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms