RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 OR8K3Q8NH51 312 aa11.78□□□□□ -0.52
UBXN4-201ENST00000272638 AP3S1Q92572 193 aa11.78□□□□□ -0.52
UBXN4-201ENST00000272638 SLC25A36Q96CQ1 311 aa11.78□□□□□ -0.52
UBXN4-201ENST00000272638 TMEM38AQ9H6F2 299 aa11.78□□□□□ -0.52
UBXN4-201ENST00000272638 ZNF222Q9UK12 451 aa11.78□□□□□ -0.52
UBXN4-201ENST00000272638 MRPS33Q9Y291 106 aaKnown RBP11.78□□□□□ -0.52
UBXN4-201ENST00000272638 CCDC85CA6NKD9 419 aa11.78□□□□□ -0.52
UBXN4-201ENST00000272638 TMEM35AQ53FP2 167 aa11.78□□□□□ -0.52
UBXN4-201ENST00000272638 LAIR2Q6ISS4 152 aa11.78□□□□□ -0.52
UBXN4-201ENST00000272638 ZNF517Q6ZMY9 492 aaPredicted RBP11.78□□□□□ -0.52
UBXN4-201ENST00000272638 PRICKLE2Q7Z3G6 844 aa11.78□□□□□ -0.52
UBXN4-201ENST00000272638 SFTPA2Q8IWL1 248 aa11.78□□□□□ -0.52
UBXN4-201ENST00000272638 GPR32P1Q8NGA4 272 aa11.78□□□□□ -0.52
UBXN4-201ENST00000272638 OR9A4Q8NGU2 314 aa11.78□□□□□ -0.52
UBXN4-201ENST00000272638 FANK1Q8TC84 345 aa11.78□□□□□ -0.52
UBXN4-201ENST00000272638 TMEM255BQ8WV15 326 aa11.78□□□□□ -0.52
UBXN4-201ENST00000272638 METTL2AQ96IZ6 378 aaKnown RBP11.78□□□□□ -0.52
UBXN4-201ENST00000272638 PTCHD1Q96NR3 888 aa11.78□□□□□ -0.52
UBXN4-201ENST00000272638 TTYH2Q9BSA4 534 aa11.78□□□□□ -0.52
UBXN4-201ENST00000272638 C12orf71A8MTZ7 269 aa11.77□□□□□ -0.52
UBXN4-201ENST00000272638 UPK1BO75841 260 aa11.77□□□□□ -0.52
UBXN4-201ENST00000272638 SOD1P00441 154 aa11.77□□□□□ -0.52
UBXN4-201ENST00000272638 BMP8BP34820 402 aa11.77□□□□□ -0.52
UBXN4-201ENST00000272638 DRD3P35462 400 aa11.77□□□□□ -0.52
UBXN4-201ENST00000272638 REEP5Q00765 189 aa11.77□□□□□ -0.52
UBXN4-201ENST00000272638 ARHGAP19Q14CB8 494 aa11.77□□□□□ -0.52
UBXN4-201ENST00000272638 INAVAQ3KP66 663 aa11.77□□□□□ -0.52
UBXN4-201ENST00000272638 AGBL4Q5VU57 503 aa11.77□□□□□ -0.52
UBXN4-201ENST00000272638 CXXC5Q7LFL8 322 aaKnown RBP11.77□□□□□ -0.52
UBXN4-201ENST00000272638 BMP8AQ7Z5Y6 402 aa11.77□□□□□ -0.52
UBXN4-201ENST00000272638 CADM3Q8N126 398 aa11.77□□□□□ -0.52
UBXN4-201ENST00000272638 OR2T33Q8NG76 320 aa11.77□□□□□ -0.52
UBXN4-201ENST00000272638 LMX1AQ8TE12 382 aa11.77□□□□□ -0.52
UBXN4-201ENST00000272638 THAP3Q8WTV1 239 aaPredicted RBP11.77□□□□□ -0.52
UBXN4-201ENST00000272638 WFDC6Q9BQY6 131 aa11.77□□□□□ -0.52
UBXN4-201ENST00000272638 TBCCD1Q9NVR7 557 aa11.77□□□□□ -0.52
UBXN4-201ENST00000272638 MARK1Q9P0L2 795 aa11.77□□□□□ -0.52
UBXN4-201ENST00000272638 MED31Q9Y3C7 131 aa11.77□□□□□ -0.52
UBXN4-201ENST00000272638 CHURC1-FNTBB4DL54 471 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 M0R082 166 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 DYRK3O43781 588 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 GRK5P34947 590 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 IGFALSP35858 605 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 MRPL19P49406 292 aaKnown RBP11.77□□□□□ -0.53
UBXN4-201ENST00000272638 TFF2Q03403 129 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 SLC7A5P1Q8MH63 180 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 NATD1Q8N6N6 113 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 GNPDA2Q8TDQ7 276 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 CHPT1Q8WUD6 406 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 ZFPM2Q8WW38 1151 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 APH1BQ8WW43 257 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 MS4A6EQ96DS6 147 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 ACTRT3Q9BYD9 372 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 EPHX3Q9H6B9 360 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 ATP13A2Q9NQ11 1180 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 ACTR10Q9NZ32 417 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 APOBEC3BQ9UH17 382 aaKnown RBP11.77□□□□□ -0.53
UBXN4-201ENST00000272638 PHF11Q9UIL8 331 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 NAALAD2Q9Y3Q0 740 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 GMEB1Q9Y692 573 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 RP1P56715 2156 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 PTPRZ1P23471 2315 aaPredicted RBP11.77□□□□□ -0.53
UBXN4-201ENST00000272638 TSC2P49815 1807 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 A0A087WUU8 490 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 AKAP8O43823 692 aaKnown RBP11.77□□□□□ -0.53
UBXN4-201ENST00000272638 EGFP01133 1207 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 TNFP01375 233 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 PCMT1P22061 227 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 RPS19P39019 145 aaKnown RBP11.77□□□□□ -0.53
UBXN4-201ENST00000272638 ANGPT1Q15389 498 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 HYAL4Q2M3T9 481 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 TMEM52BQ4KMG9 183 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 ADAMTSL4Q6UY14 1074 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 PLPP6Q8IY26 295 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 PHOSPHO1Q8TCT1 267 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 DYNC2LI1Q8TCX1 351 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 TGM7Q96PF1 710 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 ERMAPQ96PL5 475 aaPredicted RBP11.77□□□□□ -0.53
UBXN4-201ENST00000272638 ADAM30Q9UKF2 790 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 ICKQ9UPZ9 632 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 CMAHPQ9Y471 501 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 UNC13CQ8NB66 2214 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 UNC80Q8N2C7 3258 aa11.77□□□□□ -0.53
UBXN4-201ENST00000272638 LOC105369274A0A096LPK9 316 aa11.76□□□□□ -0.53
UBXN4-201ENST00000272638 LOC102723532A0A0G2JNH3 316 aa11.76□□□□□ -0.53
UBXN4-201ENST00000272638 A8MVJ9 347 aa11.76□□□□□ -0.53
UBXN4-201ENST00000272638 CLDN4O14493 209 aa11.76□□□□□ -0.53
UBXN4-201ENST00000272638 SOCS6O14544 535 aa11.76□□□□□ -0.53
UBXN4-201ENST00000272638 GPX5O75715 221 aa11.76□□□□□ -0.53
UBXN4-201ENST00000272638 PRPH2P23942 346 aa11.76□□□□□ -0.53
UBXN4-201ENST00000272638 NDUFS1P28331 727 aa11.76□□□□□ -0.53
UBXN4-201ENST00000272638 RPS25P62851 125 aaKnown RBP11.76□□□□□ -0.53
UBXN4-201ENST00000272638 GPR18Q14330 331 aa11.76□□□□□ -0.53
UBXN4-201ENST00000272638 MZT2AQ6P582 158 aa11.76□□□□□ -0.53
UBXN4-201ENST00000272638 SHISA6Q6ZSJ9 500 aa11.76□□□□□ -0.53
UBXN4-201ENST00000272638 ZNF765Q7L2R6 523 aa11.76□□□□□ -0.53
UBXN4-201ENST00000272638 OR4N4Q8N0Y3 316 aa11.76□□□□□ -0.53
UBXN4-201ENST00000272638 SIMC1Q8NDZ2 872 aa11.76□□□□□ -0.53
UBXN4-201ENST00000272638 FAM83CQ9BQN1 747 aa11.76□□□□□ -0.53
UBXN4-201ENST00000272638 WSB2Q9NYS7 404 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms