RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 LIX1LQ8IVB5 337 aa16.84■□□□□ 0.29
TRAF4-201ENST00000262395 CPOQ8IVL8 374 aa16.84■□□□□ 0.29
TRAF4-201ENST00000262395 KLHL36Q8N4N3 616 aa16.84■□□□□ 0.29
TRAF4-201ENST00000262395 DHRS9Q9BPW9 319 aa16.84■□□□□ 0.29
TRAF4-201ENST00000262395 GTPBP2Q9BX10 602 aaKnown RBP16.84■□□□□ 0.29
TRAF4-201ENST00000262395 CDCP1Q9H5V8 836 aa16.84■□□□□ 0.29
TRAF4-201ENST00000262395 BEX1Q9HBH7 125 aa16.84■□□□□ 0.29
TRAF4-201ENST00000262395 IMP3Q9NV31 184 aaKnown RBP16.84■□□□□ 0.29
TRAF4-201ENST00000262395 SAGE1Q9NXZ1 904 aa16.84■□□□□ 0.29
TRAF4-201ENST00000262395 TAS2R7Q9NYW3 318 aa16.84■□□□□ 0.29
TRAF4-201ENST00000262395 DENND4CQ5VZ89 1909 aa16.84■□□□□ 0.29
TRAF4-201ENST00000262395 LEUTXA8MZ59 168 aa16.84■□□□□ 0.29
TRAF4-201ENST00000262395 LATO43561 262 aa16.84■□□□□ 0.29
TRAF4-201ENST00000262395 EOGTQ5NDL2 527 aa16.84■□□□□ 0.29
TRAF4-201ENST00000262395 LCTLQ6UWM7 567 aa16.84■□□□□ 0.29
TRAF4-201ENST00000262395 ZNF793Q6ZN11 406 aa16.84■□□□□ 0.29
TRAF4-201ENST00000262395 OR8H3Q8N146 312 aa16.84■□□□□ 0.29
TRAF4-201ENST00000262395 C9orf62Q8N4C0 152 aa16.84■□□□□ 0.29
TRAF4-201ENST00000262395 SETD7Q8WTS6 366 aaKnown RBP16.84■□□□□ 0.29
TRAF4-201ENST00000262395 DACT3Q96B18 629 aaPredicted RBP16.84■□□□□ 0.29
TRAF4-201ENST00000262395 NUDT15Q9NV35 164 aa16.84■□□□□ 0.29
TRAF4-201ENST00000262395 SRRDQ9UH36 339 aa16.84■□□□□ 0.29
TRAF4-201ENST00000262395 MGAT4AQ9UM21 535 aa16.84■□□□□ 0.29
TRAF4-201ENST00000262395 NCKAP1Q9Y2A7 1128 aa16.84■□□□□ 0.29
TRAF4-201ENST00000262395 IRAK3Q9Y616 596 aa16.84■□□□□ 0.29
TRAF4-201ENST00000262395 KDM4EB2RXH2 506 aaPredicted RBP16.83■□□□□ 0.29
TRAF4-201ENST00000262395 CDK2AP1O14519 115 aa16.83■□□□□ 0.29
TRAF4-201ENST00000262395 FGBP02675 491 aa16.83■□□□□ 0.29
TRAF4-201ENST00000262395 C6P13671 934 aa16.83■□□□□ 0.29
TRAF4-201ENST00000262395 GSTM3P21266 225 aa16.83■□□□□ 0.29
TRAF4-201ENST00000262395 DEFB103AP81534 67 aa16.83■□□□□ 0.29
TRAF4-201ENST00000262395 NRMQ8IXM6 262 aa16.83■□□□□ 0.29
TRAF4-201ENST00000262395 GNPDA2Q8TDQ7 276 aa16.83■□□□□ 0.29
TRAF4-201ENST00000262395 DOK4Q8TEW6 326 aa16.83■□□□□ 0.29
TRAF4-201ENST00000262395 RGMAQ96B86 450 aa16.83■□□□□ 0.29
TRAF4-201ENST00000262395 CCDC120Q96HB5 630 aa16.83■□□□□ 0.29
TRAF4-201ENST00000262395 COQ10AQ96MF6 247 aa16.83■□□□□ 0.29
TRAF4-201ENST00000262395 THAP7Q9BT49 309 aaPredicted RBP16.83■□□□□ 0.29
TRAF4-201ENST00000262395 MED28Q9H204 178 aa16.83■□□□□ 0.29
TRAF4-201ENST00000262395 OR52A5Q9H2C5 316 aa16.83■□□□□ 0.29
TRAF4-201ENST00000262395 ENAMQ9NRM1 1142 aa16.83■□□□□ 0.29
TRAF4-201ENST00000262395 SLC13A4Q9UKG4 626 aa16.83■□□□□ 0.29
TRAF4-201ENST00000262395 LOC105369274A0A096LPK9 316 aa16.83■□□□□ 0.28
TRAF4-201ENST00000262395 ANTXRLA6NF34 631 aa16.83■□□□□ 0.28
TRAF4-201ENST00000262395 CREB3L2Q70SY1 520 aa16.83■□□□□ 0.28
TRAF4-201ENST00000262395 GRAMD2AQ8IUY3 354 aa16.83■□□□□ 0.28
TRAF4-201ENST00000262395 GPR135Q8IZ08 494 aa16.83■□□□□ 0.28
TRAF4-201ENST00000262395 OR4N4Q8N0Y3 316 aa16.83■□□□□ 0.28
TRAF4-201ENST00000262395 BEST4Q8NFU0 473 aa16.83■□□□□ 0.28
TRAF4-201ENST00000262395 OR8K5Q8NH50 307 aa16.83■□□□□ 0.28
TRAF4-201ENST00000262395 TMEM255BQ8WV15 326 aa16.83■□□□□ 0.28
TRAF4-201ENST00000262395 KAT2AQ92830 837 aa16.83■□□□□ 0.28
TRAF4-201ENST00000262395 TTTY10Q9BZA0 68 aa16.83■□□□□ 0.28
TRAF4-201ENST00000262395 NARFLQ9H6Q4 476 aa16.83■□□□□ 0.28
TRAF4-201ENST00000262395 SLC35C2Q9NQQ7 365 aa16.83■□□□□ 0.28
TRAF4-201ENST00000262395 MRPS18AQ9NVS2 196 aaKnown RBP16.83■□□□□ 0.28
TRAF4-201ENST00000262395 LIPT1Q9Y234 373 aa16.83■□□□□ 0.28
TRAF4-201ENST00000262395 MRPS7Q9Y2R9 242 aaKnown RBP16.83■□□□□ 0.28
TRAF4-201ENST00000262395 SLC16A1P53985 500 aa16.83■□□□□ 0.28
TRAF4-201ENST00000262395 SRP54P61011 504 aaKnown RBP16.83■□□□□ 0.28
TRAF4-201ENST00000262395 NTHL1P78549 312 aa16.83■□□□□ 0.28
TRAF4-201ENST00000262395 DSG2Q14126 1118 aa16.83■□□□□ 0.28
TRAF4-201ENST00000262395 DUSP6Q16828 381 aa16.83■□□□□ 0.28
TRAF4-201ENST00000262395 CDONQ4KMG0 1287 aa16.83■□□□□ 0.28
TRAF4-201ENST00000262395 ANGPTL6Q8NI99 470 aa16.83■□□□□ 0.28
TRAF4-201ENST00000262395 ZNF431Q8TF32 576 aaPredicted RBP16.83■□□□□ 0.28
TRAF4-201ENST00000262395 ZCCHC2Q9C0B9 1178 aaKnown RBP16.83■□□□□ 0.28
TRAF4-201ENST00000262395 AICDAQ9GZX7 198 aa16.83■□□□□ 0.28
TRAF4-201ENST00000262395 C11orf49Q9H6J7 331 aa16.83■□□□□ 0.28
TRAF4-201ENST00000262395 HINT3Q9NQE9 182 aaKnown RBP16.83■□□□□ 0.28
TRAF4-201ENST00000262395 TNFRSF10DQ9UBN6 386 aa16.83■□□□□ 0.28
TRAF4-201ENST00000262395 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.82■□□□□ 0.28
TRAF4-201ENST00000262395 A0A1W2PPK0 400 aa16.82■□□□□ 0.28
TRAF4-201ENST00000262395 SURF4O15260 269 aa16.82■□□□□ 0.28
TRAF4-201ENST00000262395 HYAL3O43820 417 aaPredicted RBP16.82■□□□□ 0.28
TRAF4-201ENST00000262395 FCMRO60667 390 aa16.82■□□□□ 0.28
TRAF4-201ENST00000262395 KELP23276 732 aa16.82■□□□□ 0.28
TRAF4-201ENST00000262395 CCR8P51685 355 aa16.82■□□□□ 0.28
TRAF4-201ENST00000262395 TSPAN31Q12999 210 aa16.82■□□□□ 0.28
TRAF4-201ENST00000262395 FZD5Q13467 585 aa16.82■□□□□ 0.28
TRAF4-201ENST00000262395 AADACL4Q5VUY2 407 aa16.82■□□□□ 0.28
TRAF4-201ENST00000262395 KIAA1211LQ6NV74 962 aa16.82■□□□□ 0.28
TRAF4-201ENST00000262395 PLBD1Q6P4A8 553 aa16.82■□□□□ 0.28
TRAF4-201ENST00000262395 LRRTM4Q86VH4 590 aa16.82■□□□□ 0.28
TRAF4-201ENST00000262395 SAMD8Q96LT4 415 aa16.82■□□□□ 0.28
TRAF4-201ENST00000262395 ZNF649Q9BS31 505 aa16.82■□□□□ 0.28
TRAF4-201ENST00000262395 HMX1Q9NP08 348 aaPredicted RBP16.82■□□□□ 0.28
TRAF4-201ENST00000262395 PAK6Q9NQU5 681 aaPredicted RBP16.82■□□□□ 0.28
TRAF4-201ENST00000262395 KLHL1Q9NR64 748 aa16.82■□□□□ 0.28
TRAF4-201ENST00000262395 H2AFY2Q9P0M6 372 aaPredicted RBP16.82■□□□□ 0.28
TRAF4-201ENST00000262395 SCN3AQ9NY46 2000 aa16.82■□□□□ 0.28
TRAF4-201ENST00000262395 C4orf51C9J302 202 aa16.82■□□□□ 0.28
TRAF4-201ENST00000262395 BTN3A3O00478 584 aa16.82■□□□□ 0.28
TRAF4-201ENST00000262395 SCAMP1O15126 338 aa16.82■□□□□ 0.28
TRAF4-201ENST00000262395 CHP2O43745 196 aa16.82■□□□□ 0.28
TRAF4-201ENST00000262395 REM1O75628 298 aa16.82■□□□□ 0.28
TRAF4-201ENST00000262395 PAPLNO95428 1278 aa16.82■□□□□ 0.28
TRAF4-201ENST00000262395 CXCL3P19876 107 aa16.82■□□□□ 0.28
TRAF4-201ENST00000262395 SSTR2P30874 369 aa16.82■□□□□ 0.28
TRAF4-201ENST00000262395 FRKP42685 505 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms