RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, human

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF540-204	ENST00000586792	NEPRO	Q6NW34	567 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	CES3	Q6UWW8	571 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	KIAA0408	Q6ZU52	694 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	ZNF534	Q76KX8	674 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	LDB1	Q86U70	411 aa	Predicted RBP	4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	VASH2	Q86V25	355 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	KCNMB4	Q86W47	210 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	TICAM1	Q8IUC6	712 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	TMEM126B	Q8IUX1	230 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	DCUN1D3	Q8IWE4	304 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	CCDC28A	Q8IWP9	274 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	MCEMP1	Q8IX19	187 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	SLC22A15	Q8IZD6	547 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	KDM8	Q8N371	416 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	ZBTB2	Q8N680	514 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	SMYD1	Q8NB12	490 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	MCU	Q8NE86	351 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	OR5AR1	Q8NGP9	310 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	OR8K5	Q8NH50	307 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	OR5K2	Q8NHB8	316 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	FAM81A	Q8TBF8	368 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	ACMSD	Q8TDX5	336 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	TRPC4AP	Q8TEL6	797 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	SLCO2A1	Q92959	643 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	RAD51AP1	Q96B01	352 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	SNF8	Q96H20	258 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	ANKRD27	Q96NW4	1050 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	NR1H4	Q96RI1	486 aa	Predicted RBP	4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	MAP3K3	Q99759	626 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	TRMO	Q9BU70	441 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	KIFC1	Q9BW19	673 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	CAPS2	Q9BXY5	557 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	TFB2M	Q9H5Q4	396 aa	Known RBP	4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	PRORY	Q9H606	182 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	SMURF2	Q9HAU4	748 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	SYTL2	Q9HCH5	934 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	FGF21	Q9NSA1	209 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	CENPM	Q9NSP4	180 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	TREX1	Q9NSU2	369 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	BEX4	Q9NWD9	120 aa	Predicted RBP	4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	OR6C2	Q9NZP2	312 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	TXNDC16	Q9P2K2	825 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	TRPC4	Q9UBN4	977 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	PCYOX1	Q9UHG3	505 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	BAIAP2L1	Q9UHR4	511 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	MID2	Q9UJV3	735 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	OSGIN1	Q9UJX0	560 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	ANAPC2	Q9UJX6	822 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	BAG5	Q9UL15	447 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	PYCARD	Q9ULZ3	195 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	SNX6	Q9UNH7	406 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	CARD8	Q9Y2G2	431 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	PRSS21	Q9Y6M0	314 aa		4.41	□□□□□ -1.7
ZNF540-204	ENST00000586792	SPTBN2	O15020	2390 aa		4.4	□□□□□ -1.7
ZNF540-204	ENST00000586792	LOC100509620	A0A075B734	347 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	IGHV5-51	A0A0C4DH38	117 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792		A0A0J9YY10	115 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	SLC5A10	A0PJK1	596 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	GAGE10	A6NGK3	116 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	NCF1B	A6NI72	391 aa	Predicted RBP	4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	ACOD1	A6NK06	481 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	IQCF5	A8MTL0	148 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	NCF1C	A8MVU1	366 aa	Predicted RBP	4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792		C9J4A7	227 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792		E7EQ34	232 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792		H0YIZ8	118 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792		K7ENP7	123 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	E2F3	O00716	465 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	NIPSNAP2	O75323	286 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	VPS26A	O75436	327 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	AKR7A3	O95154	331 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	SYF2	O95926	243 aa	Known RBP	4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	CAT	P04040	527 aa	Known RBP	4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	HBQ1	P09105	142 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	T-ENOL	P0DO92	83 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	TROVE2	P10155	538 aa	Known RBP eCLIP	4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	FGF5	P12034	268 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	PKM	P14618	531 aa	Known RBP	4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	LIF	P15018	202 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	ZNF24	P17028	368 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	TCN2	P20062	427 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	RPS3	P23396	243 aa	Known RBP eCLIP	4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	PRDX3	P30048	256 aa	Known RBP	4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	PRKAR1B	P31321	381 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	CCR7	P32248	378 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	S100A5	P33763	92 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	DLST	P36957	453 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	MDH1	P40925	334 aa	Known RBP	4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	RGS4	P49798	205 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	KHK	P50053	298 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	HTR6	P50406	440 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	RAB28	P51157	221 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	KPNA2	P52292	529 aa	Known RBP	4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	PMS2	P54278	862 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	ADAR	P55265	1226 aa	Known RBP	4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	CDH15	P55291	814 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	PPP1CA	P62136	330 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	RPS15	P62841	145 aa	Known RBP	4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	CFHR1	Q03591	330 aa		4.4	□□□□□ -1.71
ZNF540-204	ENST00000586792	ABR	Q12979	859 aa		4.4	□□□□□ -1.71

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