RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 BLACEA4D250 179 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 E2F3O00716 465 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 PRKRAO75569 313 aaKnown RBP16.34■□□□□ 0.21
PTPN21-208ENST00000556564 GABRB3P28472 473 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 PITPNAQ00169 270 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 PLRG1O43660 514 aaKnown RBP16.34■□□□□ 0.21
PTPN21-208ENST00000556564 CTSLP07711 333 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 C1orf53Q5VUE5 145 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 LRFN4Q6PJG9 635 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 SPEM1Q8N4L4 309 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 CNEP1R1Q8N9A8 125 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 RXFP3Q9NSD7 469 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 OR7A17O14581 309 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 MBTPS2O43462 519 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 SEMA3DO95025 777 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 PPP1R3DO95685 299 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 S1PR1P21453 382 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 GGT2P36268 569 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 STK11Q15831 433 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 PYCR3Q53H96 274 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 SNIP1Q8TAD8 396 aaKnown RBP16.34■□□□□ 0.21
PTPN21-208ENST00000556564 SGCDQ92629 289 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 RBM24Q9BX46 236 aaKnown RBP16.34■□□□□ 0.21
PTPN21-208ENST00000556564 C1GALT1Q9NS00 363 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 GPR75O95800 540 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 TRA2BP62995 288 aaKnown RBP16.34■□□□□ 0.21
PTPN21-208ENST00000556564 TNFRSF17Q02223 184 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 DMWDQ09019 674 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 DPH1Q9BZG8 443 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 EXOSC1Q9Y3B2 195 aaKnown RBP16.34■□□□□ 0.21
PTPN21-208ENST00000556564 E2F1Q01094 437 aa16.33■□□□□ 0.21
PTPN21-208ENST00000556564 MEX3DQ86XN8 651 aaKnown RBP16.33■□□□□ 0.21
PTPN21-208ENST00000556564 CPNE2Q96FN4 548 aaPredicted RBP16.33■□□□□ 0.21
PTPN21-208ENST00000556564 DHRS4Q9BTZ2 278 aa16.33■□□□□ 0.21
PTPN21-208ENST00000556564 GXYLT2A0PJZ3 443 aa16.33■□□□□ 0.21
PTPN21-208ENST00000556564 PLATP00750 562 aa16.33■□□□□ 0.21
PTPN21-208ENST00000556564 CKMT1AP12532 417 aa16.33■□□□□ 0.21
PTPN21-208ENST00000556564 ACVR1BP36896 505 aa16.33■□□□□ 0.21
PTPN21-208ENST00000556564 SLC6A8P48029 635 aa16.33■□□□□ 0.21
PTPN21-208ENST00000556564 HOXC5Q00444 222 aa16.33■□□□□ 0.21
PTPN21-208ENST00000556564 MROQ9BYG7 248 aa16.33■□□□□ 0.21
PTPN21-208ENST00000556564 PLEKHA6Q9Y2H5 1048 aa16.33■□□□□ 0.21
PTPN21-208ENST00000556564 FMO6PO60774 539 aa16.33■□□□□ 0.2
PTPN21-208ENST00000556564 ECH1Q13011 328 aa16.33■□□□□ 0.2
PTPN21-208ENST00000556564 MALLQ13021 153 aa16.33■□□□□ 0.2
PTPN21-208ENST00000556564 SFT2D3Q587I9 215 aa16.33■□□□□ 0.2
PTPN21-208ENST00000556564 TMEM201Q5SNT2 666 aa16.33■□□□□ 0.2
PTPN21-208ENST00000556564 EDEM2Q9BV94 578 aa16.33■□□□□ 0.2
PTPN21-208ENST00000556564 A6NLC8 198 aa16.33■□□□□ 0.2
PTPN21-208ENST00000556564 G3V3Y1 287 aa16.33■□□□□ 0.2
PTPN21-208ENST00000556564 ENTPD6O75354 484 aa16.33■□□□□ 0.2
PTPN21-208ENST00000556564 ATE1O95260 518 aa16.33■□□□□ 0.2
PTPN21-208ENST00000556564 SNAP29O95721 258 aa16.33■□□□□ 0.2
PTPN21-208ENST00000556564 IGLV3-25P01717 112 aa16.33■□□□□ 0.2
PTPN21-208ENST00000556564 OPRD1P41143 372 aa16.33■□□□□ 0.2
PTPN21-208ENST00000556564 CEACAM7Q14002 265 aa16.33■□□□□ 0.2
PTPN21-208ENST00000556564 ZNF595Q8IYB9 648 aa16.33■□□□□ 0.2
PTPN21-208ENST00000556564 SULT2B1O00204 365 aa16.33■□□□□ 0.2
PTPN21-208ENST00000556564 CLPXO76031 633 aa16.33■□□□□ 0.2
PTPN21-208ENST00000556564 CD79AP11912 226 aa16.33■□□□□ 0.2
PTPN21-208ENST00000556564 EEF1A1P68104 462 aaKnown RBP16.33■□□□□ 0.2
PTPN21-208ENST00000556564 PRAMEF20Q5VT98 475 aa16.33■□□□□ 0.2
PTPN21-208ENST00000556564 KCTD18Q6PI47 426 aaPredicted RBP16.33■□□□□ 0.2
PTPN21-208ENST00000556564 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.33■□□□□ 0.2
PTPN21-208ENST00000556564 PDFQ9HBH1 243 aa16.33■□□□□ 0.2
PTPN21-208ENST00000556564 GABBR2O75899 941 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 GCAP28676 217 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 BICRALQ6AI39 1079 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 ARHGAP11AQ6P4F7 1023 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 HACD2Q6Y1H2 254 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 ANKRA2Q9H9E1 313 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 PCDHA9Q9Y5H5 950 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 ACOX3O15254 700 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 YY2O15391 372 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 KIAA0100Q14667 2235 aaKnown RBP16.32■□□□□ 0.2
PTPN21-208ENST00000556564 OR13C3Q8NGS6 347 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 OR14A16Q8NHC5 309 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 KIR3DX1Q9H7L2 352 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 LIN28AQ9H9Z2 209 aaKnown RBP16.32■□□□□ 0.2
PTPN21-208ENST00000556564 PEX16Q9Y5Y5 336 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 FAM171A2A8MVW0 826 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 OXSR1O95747 527 aaPredicted RBP16.32■□□□□ 0.2
PTPN21-208ENST00000556564 DHFRP00374 187 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 MYF5P13349 255 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 RPL34P49207 117 aaKnown RBP16.32■□□□□ 0.2
PTPN21-208ENST00000556564 SNU13P55769 128 aaKnown RBP16.32■□□□□ 0.2
PTPN21-208ENST00000556564 REEP5Q00765 189 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 UBE2Q1Q7Z7E8 422 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 CCL4L1Q8NHW4 92 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 KCNN1Q92952 543 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 EGLN2Q96KS0 407 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 OR4K3Q96R72 315 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 UTP23Q9BRU9 249 aaKnown RBP16.32■□□□□ 0.2
PTPN21-208ENST00000556564 USP36Q9P275 1121 aaKnown RBP16.32■□□□□ 0.2
PTPN21-208ENST00000556564 GLS2Q9UI32 602 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 A0A1W2PPK0 400 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 BCL6P41182 706 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 C18orf63Q68DL7 685 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 PINK1Q9BXM7 581 aa16.32■□□□□ 0.2
PTPN21-208ENST00000556564 TMEM9BQ9NQ34 198 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms