RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 ABCD3P28288 659 aa12.78□□□□□ -0.36
CCND1-204ENST00000539241 TIMP3P35625 211 aa12.78□□□□□ -0.36
CCND1-204ENST00000539241 ASCL1P50553 236 aa12.78□□□□□ -0.36
CCND1-204ENST00000539241 IST1P53990 364 aa12.78□□□□□ -0.36
CCND1-204ENST00000539241 WNT3P56703 355 aa12.78□□□□□ -0.36
CCND1-204ENST00000539241 RAE1P78406 368 aaKnown RBP12.78□□□□□ -0.36
CCND1-204ENST00000539241 GUCY1A3Q02108 690 aa12.78□□□□□ -0.36
CCND1-204ENST00000539241 TOMM20Q15388 145 aa12.78□□□□□ -0.36
CCND1-204ENST00000539241 ATP6AP1LQ52LC2 224 aa12.78□□□□□ -0.36
CCND1-204ENST00000539241 VWA5B2Q8N398 1253 aa12.78□□□□□ -0.36
CCND1-204ENST00000539241 LRRC46Q96FV0 321 aa12.78□□□□□ -0.36
CCND1-204ENST00000539241 TMEM41AQ96HV5 264 aa12.78□□□□□ -0.36
CCND1-204ENST00000539241 FCRL1Q96LA6 429 aa12.78□□□□□ -0.36
CCND1-204ENST00000539241 C3orf30Q96M34 536 aa12.78□□□□□ -0.36
CCND1-204ENST00000539241 POLDIP3Q9BY77 421 aaKnown RBP12.78□□□□□ -0.36
CCND1-204ENST00000539241 NUF2Q9BZD4 464 aa12.78□□□□□ -0.36
CCND1-204ENST00000539241 BRINP2Q9C0B6 783 aa12.78□□□□□ -0.36
CCND1-204ENST00000539241 PRDM14Q9GZV8 571 aa12.78□□□□□ -0.36
CCND1-204ENST00000539241 NXF5Q9H1B4 397 aaKnown RBP12.78□□□□□ -0.36
CCND1-204ENST00000539241 MEAF6Q9HAF1 191 aa12.78□□□□□ -0.36
CCND1-204ENST00000539241 CES1P1Q9UKY3 287 aa12.78□□□□□ -0.36
CCND1-204ENST00000539241 CAMK2AQ9UQM7 478 aa12.78□□□□□ -0.36
CCND1-204ENST00000539241 CFL2Q9Y281 166 aa12.78□□□□□ -0.36
CCND1-204ENST00000539241 DTX4Q9Y2E6 619 aa12.78□□□□□ -0.36
CCND1-204ENST00000539241 TMED5Q9Y3A6 229 aa12.78□□□□□ -0.36
CCND1-204ENST00000539241 PCDHA9Q9Y5H5 950 aa12.78□□□□□ -0.36
CCND1-204ENST00000539241 AKAP6Q13023 2319 aa12.77□□□□□ -0.36
CCND1-204ENST00000539241 GNG14A0A1W2PPG7 69 aa12.77□□□□□ -0.37
CCND1-204ENST00000539241 C1orf226A1L170 272 aa12.77□□□□□ -0.37
CCND1-204ENST00000539241 GNB5O14775 395 aa12.77□□□□□ -0.37
CCND1-204ENST00000539241 ERAL1O75616 437 aaKnown RBP12.77□□□□□ -0.37
CCND1-204ENST00000539241 PPM1BO75688 479 aa12.77□□□□□ -0.37
CCND1-204ENST00000539241 IL2RAP01589 272 aa12.77□□□□□ -0.37
CCND1-204ENST00000539241 ABCB1P08183 1280 aaPredicted RBP12.77□□□□□ -0.37
CCND1-204ENST00000539241 FEN1P39748 380 aaKnown RBP12.77□□□□□ -0.37
CCND1-204ENST00000539241 GSTM5P46439 218 aa12.77□□□□□ -0.37
CCND1-204ENST00000539241 TRA2BP62995 288 aaKnown RBP12.77□□□□□ -0.37
CCND1-204ENST00000539241 RPL38P63173 70 aaKnown RBP12.77□□□□□ -0.37
CCND1-204ENST00000539241 KIAA0040Q15053 153 aa12.77□□□□□ -0.37
CCND1-204ENST00000539241 SF3B4Q15427 424 aaKnown RBP eCLIP12.77□□□□□ -0.373e-15■■■■□ 25.3
CCND1-204ENST00000539241 NNATQ16517 81 aa12.77□□□□□ -0.37
CCND1-204ENST00000539241 PRICKLE4Q2TBC4 344 aa12.77□□□□□ -0.37
CCND1-204ENST00000539241 GALNTL6Q49A17 601 aa12.77□□□□□ -0.37
CCND1-204ENST00000539241 FLYWCH1Q4VC44 716 aa12.77□□□□□ -0.37
CCND1-204ENST00000539241 EIPR1Q53HC9 387 aa12.77□□□□□ -0.37
CCND1-204ENST00000539241 NHSL2Q5HYW2 709 aa12.77□□□□□ -0.37
CCND1-204ENST00000539241 NSUN5P2Q63ZY6 315 aa12.77□□□□□ -0.37
CCND1-204ENST00000539241 VASNQ6EMK4 673 aa12.77□□□□□ -0.37
CCND1-204ENST00000539241 SLC48A1Q6P1K1 146 aa12.77□□□□□ -0.37
CCND1-204ENST00000539241 FAM111BQ6SJ93 734 aa12.77□□□□□ -0.37
CCND1-204ENST00000539241 WDR75Q8IWA0 830 aaKnown RBP12.77□□□□□ -0.37
CCND1-204ENST00000539241 LRRC34Q8IZ02 419 aa12.77□□□□□ -0.37
CCND1-204ENST00000539241 MMP21Q8N119 569 aa12.77□□□□□ -0.37
CCND1-204ENST00000539241 NINJ1Q92982 152 aa12.77□□□□□ -0.37
CCND1-204ENST00000539241 RNASE6Q93091 150 aaKnown RBP12.77□□□□□ -0.37
CCND1-204ENST00000539241 TUBGCP3Q96CW5 907 aa12.77□□□□□ -0.37
CCND1-204ENST00000539241 NTNG2Q96CW9 530 aa12.77□□□□□ -0.37
CCND1-204ENST00000539241 HSPBAP1Q96EW2 488 aa12.77□□□□□ -0.37
CCND1-204ENST00000539241 ITPAQ9BY32 194 aa12.77□□□□□ -0.37
CCND1-204ENST00000539241 UGT2B28Q9BY64 529 aa12.77□□□□□ -0.37
CCND1-204ENST00000539241 CLEC4MQ9H2X3 399 aaPredicted RBP12.77□□□□□ -0.37
CCND1-204ENST00000539241 METTL7AQ9H8H3 244 aa12.77□□□□□ -0.37
CCND1-204ENST00000539241 RASSF1Q9NS23 344 aa12.77□□□□□ -0.37
CCND1-204ENST00000539241 MAT2BQ9NZL9 334 aa12.77□□□□□ -0.37
CCND1-204ENST00000539241 ZNF629Q9UEG4 869 aaPredicted RBP12.77□□□□□ -0.37
CCND1-204ENST00000539241 BCAP29Q9UHQ4 241 aa12.77□□□□□ -0.37
CCND1-204ENST00000539241 NINQ8N4C6 2090 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 FAM221AA4D161 298 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 SDHDO14521 159 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 EDF1O60869 148 aaKnown RBP12.76□□□□□ -0.37
CCND1-204ENST00000539241 ATP1B1P05026 303 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 ANXA4P09525 319 aaPredicted RBP12.76□□□□□ -0.37
CCND1-204ENST00000539241 NAGAP17050 411 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 BMP7P18075 431 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 MAPK1P28482 360 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 PTPN6P29350 595 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 ZNF136P52737 540 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 ZNF763Q0D2J5 394 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 MGAT2Q10469 447 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 MAP4K2Q12851 820 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 EXOSC7Q15024 291 aaKnown RBP12.76□□□□□ -0.37
CCND1-204ENST00000539241 SMU1Q2TAY7 513 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 FBXL19-AS1Q494R0 122 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 RFTN2Q52LD8 501 aaPredicted RBP12.76□□□□□ -0.37
CCND1-204ENST00000539241 WIPI1Q5MNZ9 446 aaPredicted RBP12.76□□□□□ -0.37
CCND1-204ENST00000539241 C6orf136Q5SQH8 315 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 DCST1Q5T197 706 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 TIGD3Q6B0B8 471 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 NOXRED1Q6NXP6 359 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 TMEM81Q6P7N7 255 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 POMZP3Q6PJE2 187 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 ANGPTL8Q6UXH0 198 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 OR1J4Q8NGS1 313 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 FAM222BQ8WU58 562 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 HGDQ93099 445 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 ABTB1Q969K4 478 aaPredicted RBP12.76□□□□□ -0.37
CCND1-204ENST00000539241 TM4SF18Q96CE8 201 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 OMA1Q96E52 524 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 WDYHV1Q96HA8 205 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 PPP1R36Q96LQ0 422 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms