RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 IL36AQ9UHA7 158 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 STUB1Q9UNE7 303 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 KCNK6Q9Y257 313 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 HBS1LQ9Y450 684 aaKnown RBP4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 KLK4Q9Y5K2 254 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 IGLV5-45A0A087WSX0 123 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 SMIM28A0A1B0GU29 152 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 CTAGE9A4FU28 777 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 EME2A4GXA9 379 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 C5orf51A6NDU8 294 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 PRSS46E5RG02 174 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 MSH4O15457 936 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 KRT33AO76009 404 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 BAG4O95429 457 aaKnown RBP4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 YES1P07947 543 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 SFTPBP07988 381 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 GSTA2P09210 222 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 FAM200BP0CF97 657 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 CTAGE8P0CG41 777 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 FGF5P12034 268 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 CDH1P12830 882 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 SSTR1P30872 391 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 RPL9P32969 192 aaKnown RBP4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 NR4A2P43354 598 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 MAGEB1P43366 347 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 FMO5P49326 533 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 TKTL1P51854 596 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 THOP1P52888 689 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 POLR2FP61218 127 aaKnown RBP4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 OSTNP61366 133 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 ZXDBP98169 803 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 MYL7Q01449 175 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 RASGEF1BQ0VAM2 473 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 MXD4Q14582 209 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 OPCMLQ14982 345 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 DEFB133Q30KQ1 61 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 KRTAP15-1Q3LI76 137 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 ZNF542PQ5EBM4 170 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 PM20D1Q6GTS8 502 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 KLHL10Q6JEL2 608 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 CORO6Q6QEF8 472 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 MEX3BQ6ZN04 569 aaKnown RBP4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 MACC1Q6ZN28 852 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 TPGS1Q6ZTW0 290 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 NIPA1Q7RTP0 329 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 SLC16A9Q7RTY1 509 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 TMEM25Q86YD3 366 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 TBC1D10CQ8IV04 446 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 CROCCP3Q8IVE0 287 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 LAX1Q8IWV1 398 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 CTAGE4Q8IX94 777 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 ELMOD2Q8IZ81 293 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 APCDD1Q8J025 514 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 IQCF1Q8N6M8 205 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 SIDT2Q8NBJ9 832 aaKnown RBP4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 CLEC1AQ8NC01 280 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 CCNYQ8ND76 341 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 ST6GALNAC3Q8NDV1 305 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 OR2T12Q8NG77 320 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 TMED6Q8WW62 240 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 HSD17B8Q92506 261 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 GGHQ92820 318 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 PNPLA2Q96AD5 504 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 IL12RB2Q99665 862 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 SPAG8Q99932 426 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 CALN1Q9BXU9 219 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 LRRC2Q9BYS8 371 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 RIMS4Q9H426 269 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 RWDD1Q9H446 243 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 ZDHHC6Q9H6R6 413 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 AGPAT4Q9NRZ5 378 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 FAM207AQ9NSI2 230 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 FLRT3Q9NZU0 649 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 GCNT4Q9P109 453 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 C11orf21Q9P2W6 132 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 ERVK-19Q9WJR5 959 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 CLCA3PQ9Y6N3 262 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 SVEP1Q4LDE5 3571 aa4.22□□□□□ -1.73
HMGB1P23-201ENST00000518743 IGHV4OR15-8A0A075B7B6 117 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 LRRIQ4A6NIV6 560 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 ZNF587BE7ETH6 402 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 C19orf84I3L1E1 186 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 SLC28A1O00337 649 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 AKAP8O43823 692 aaKnown RBP4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 OR6A2O95222 327 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 IGHV4-39P01824 125 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 EFNA1P20827 205 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 MAT2AP31153 395 aaKnown RBP4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 HNRNPH3P31942 346 aaKnown RBP4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 STIP1P31948 543 aaKnown RBP4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 ARRB2P32121 409 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 PRPHP41219 470 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 NSFP46459 744 aaKnown RBP4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 OR3A1P47881 315 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 CCL11P51671 97 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 RPL24P83731 157 aaKnown RBP4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 CCZ1BP86790 482 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 CCZ1P86791 482 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 DMPKQ09013 629 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 TRAF3Q13114 568 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms