RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 RAB42Q8N4Z0 105 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 CEP112Q8N8E3 955 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 Q8N9P0 234 aaPredicted RBP3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 MYRIPQ8NFW9 859 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 OR2L3Q8NG85 312 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 OR2Y1Q8NGV0 311 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 GSDMBQ8TAX9 411 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 MAGEC3Q8TD91 643 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 SKA2Q8WVK7 121 aaPredicted RBP3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 ANKRD7Q92527 254 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 PTERQ96BW5 349 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 CERS2Q96G23 380 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 FER1L6-AS2Q96M78 137 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 FOPNLQ96NB1 174 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 IP6K3Q96PC2 410 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 PKP4Q99569 1192 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 SELENOSQ9BQE4 189 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 NUDT9Q9BW91 350 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 TXLNGYQ9BZA5 131 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 SLC26A1Q9H2B4 701 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 DPH5Q9H2P9 285 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 CXorf56Q9H5V9 222 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 WDR54Q9H977 334 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 SMYD2Q9NRG4 433 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 FAM114A2Q9NRY5 505 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 IARS2Q9NSE4 1012 aaKnown RBP3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 SIRT3Q9NTG7 399 aaPredicted RBP3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 CUTCQ9NTM9 273 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 TXLNGQ9NUQ3 528 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 IRAK4Q9NWZ3 460 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 P4HTMQ9NXG6 502 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 IL1RAPL1Q9NZN1 696 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 SPATA7Q9P0W8 599 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 LUZP4Q9P127 313 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 IFT80Q9P2H3 777 aaPredicted RBP3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 NLKQ9UBE8 527 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 CORO1CQ9ULV4 474 aaPredicted RBP3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 PTRH2Q9Y3E5 179 aaKnown RBP3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 ZNF462Q96JM2 2506 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 TLN1Q9Y490 2541 aaKnown RBP3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 MED13Q9UHV7 2174 aa3.28□□□□□ -1.88
UBE2D3-226ENST00000508635 GCN1Q92616 2671 aaKnown RBP3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 IGKV1-8A0A0C4DH67 115 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 A0A0J9YVX5 310 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 OR2A25A4D2G3 310 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 OR6C68A6NDL8 312 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 TMEM247A6NEH6 219 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 VSTM2BA6NLU5 285 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 CYSRT1A8MQ03 144 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 E5RI56 91 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 H0YGG7 62 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 SOCS6O14544 535 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 TNFRSF13BO14836 293 aaPredicted RBP3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 DPM1O60762 260 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 NTN1O95631 604 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 TSPAN12O95859 305 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 SLC16A8O95907 504 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 IGHEP01854 428 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 CATP04040 527 aaKnown RBP3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 MPC1LP0DKB6 136 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 ENO3P13929 434 aaPredicted RBP3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 CMPK1P30085 196 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 HSD17B2P37059 387 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 OR1D4P47884 311 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 UQCRFS1P47985 274 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 CDKN2DP55273 166 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 VSX2P58304 361 aaPredicted RBP3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 ARF3P61204 181 aaPredicted RBP3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 ABATP80404 500 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 MPP1Q00013 466 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 RELAQ04206 551 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 PRDX1Q06830 199 aaKnown RBP3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 CUL1Q13616 776 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 FHL1Q13642 323 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 RAPSNQ13702 412 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 ARHGAP19Q14CB8 494 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 NAA25Q14CX7 972 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 TWIST1Q15672 202 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 KLHL38Q2WGJ6 581 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 TTLL9Q3SXZ7 439 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 PRR30Q53SZ7 412 aaPredicted RBP3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 Q5PR19 223 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 UBAP2Q5T6F2 1119 aaKnown RBP3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 C8orf74Q6P047 294 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 PRMT9Q6P2P2 845 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 SUSD1Q6UWL2 747 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 TMEM207Q6UWW9 146 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 IGFL3Q6UXB1 125 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 Q6ZTK2 550 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 KCNMB4Q86W47 210 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 ZC3HC1Q86WB0 502 aaKnown RBP3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 PAQR7Q86WK9 346 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 IFT20Q8IY31 132 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 ZBED8Q8IZ13 594 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 FAM185AQ8N0U4 392 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 GHDCQ8N2G8 530 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 RBMXL3Q8N7X1 1067 aaKnown RBP3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 TTC29Q8NA56 475 aaPredicted RBP3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 CLEC1AQ8NC01 280 aa3.27□□□□□ -1.89
UBE2D3-226ENST00000508635 PPFIBP2Q8ND30 876 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms