RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 RELTQ969Z4 430 aa11.81□□□□□ -0.52
COL5A1-206ENST00000465877 NTNG2Q96CW9 530 aa11.81□□□□□ -0.52
COL5A1-206ENST00000465877 COQ8BQ96D53 544 aa11.81□□□□□ -0.52
COL5A1-206ENST00000465877 TMCO6Q96DC7 493 aa11.81□□□□□ -0.52
COL5A1-206ENST00000465877 FAM120BQ96EK7 910 aaKnown RBP11.81□□□□□ -0.52
COL5A1-206ENST00000465877 GIMAP5Q96F15 307 aa11.81□□□□□ -0.52
COL5A1-206ENST00000465877 CCDC120Q96HB5 630 aa11.81□□□□□ -0.52
COL5A1-206ENST00000465877 TMEM41AQ96HV5 264 aa11.81□□□□□ -0.52
COL5A1-206ENST00000465877 PRPF18Q99633 342 aaKnown RBP11.81□□□□□ -0.52
COL5A1-206ENST00000465877 DPY30Q9C005 99 aa11.81□□□□□ -0.52
COL5A1-206ENST00000465877 C3orf14Q9HBI5 128 aa11.81□□□□□ -0.52
COL5A1-206ENST00000465877 ZCCHC3Q9NUD5 404 aaKnown RBP11.81□□□□□ -0.52
COL5A1-206ENST00000465877 QPCTLQ9NXS2 382 aa11.81□□□□□ -0.52
COL5A1-206ENST00000465877 NTMQ9P121 344 aa11.81□□□□□ -0.52
COL5A1-206ENST00000465877 SUCOQ9UBS9 1254 aaKnown RBP11.81□□□□□ -0.52
COL5A1-206ENST00000465877 CBLCQ9ULV8 474 aa11.81□□□□□ -0.52
COL5A1-206ENST00000465877 C15orf41Q9Y2V0 281 aa11.81□□□□□ -0.52
COL5A1-206ENST00000465877 CACNA1CQ13936 2221 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 GOLGA8QA0A0J9YX86 632 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 GOLGA8OA6NCC3 632 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 WIPF3A6NGB9 483 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 TTC36A6NLP5 189 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 GOLGA8NF8WBI6 632 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 CCL21O00585 134 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 PRRG2O14669 202 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 GNB5O14775 395 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 SNPHO15079 494 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 ANKRD28O15084 1053 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 EMC8O43402 210 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 ZG16O60844 167 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 ICOSLGO75144 302 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 PDE9AO76083 593 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 SNX4O95219 450 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 C6orf47O95873 294 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 TPOP07202 933 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 ENDOUP21128 410 aaKnown RBP11.8□□□□□ -0.52
COL5A1-206ENST00000465877 ELAVL4P26378 380 aaKnown RBP11.8□□□□□ -0.52
COL5A1-206ENST00000465877 EVI2BP34910 448 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 PNLIPRP2P54317 469 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 PRKAG1P54619 331 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 PPP2R2AP63151 447 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 MRPS22P82650 360 aaKnown RBP11.8□□□□□ -0.52
COL5A1-206ENST00000465877 SNTA1Q13424 505 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 DECR1Q16698 335 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 DPY19L1Q2PZI1 675 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 VPS26BQ4G0F5 336 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 MFSD12Q6NUT3 480 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 SLC30A6Q6NXT4 461 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 PAOXQ6QHF9 649 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 ANGPTL8Q6UXH0 198 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 TRILQ7L0X0 811 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 MAVSQ7Z434 540 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 PACS2Q86VP3 889 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 CDRT4Q8N9R6 151 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 CEP70Q8NHQ1 597 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 PSMA8Q8TAA3 256 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 FAM57AQ8TBR7 257 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 RNF138Q8WVD3 245 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 DYDC1Q8WWB3 177 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 OR5P2Q8WZ92 322 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 HOXB13Q92826 284 aaPredicted RBP11.8□□□□□ -0.52
COL5A1-206ENST00000465877 MAELQ96JY0 434 aaKnown RBP11.8□□□□□ -0.52
COL5A1-206ENST00000465877 C7orf26Q96N11 449 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 SLC6A15Q9H2J7 730 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 UBQLN3Q9H347 655 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 WDR55Q9H6Y2 383 aaPredicted RBP11.8□□□□□ -0.52
COL5A1-206ENST00000465877 CXorf36Q9H7Y0 433 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 AIG1Q9NVV5 245 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 HRH3Q9Y5N1 445 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 WIF1Q9Y5W5 379 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 SNX8Q9Y5X2 465 aa11.8□□□□□ -0.52
COL5A1-206ENST00000465877 CRYBG3Q68DQ2 2970 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 PCNX1Q96RV3 2341 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 TRGV5A0A0B4J1U4 118 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 GXYLT2A0PJZ3 443 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 A1L4Q6 167 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 E9PBE3 544 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 AQP7O14520 342 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 NKX2-2O95096 273 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 KCNH1O95259 989 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 ACP2P11117 423 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 CYP4B1P13584 511 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 SOAT1P35610 550 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 MAP3K8P41279 467 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 KIR3DL1P43629 444 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 RFX3P48380 749 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 PRIM2P49643 509 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 CLNS1AP54105 237 aaKnown RBP11.79□□□□□ -0.52
COL5A1-206ENST00000465877 GAB1Q13480 694 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 TP53BP2Q13625 1128 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 LASP1Q14847 261 aaKnown RBP11.79□□□□□ -0.52
COL5A1-206ENST00000465877 PGS1Q32NB8 556 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 LSM12Q3MHD2 195 aaKnown RBP11.79□□□□□ -0.52
COL5A1-206ENST00000465877 CYP27C1Q4G0S4 372 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 SLC9B1Q4ZJI4 515 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 OR4F3Q6IEY1 312 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 CLECL1Q8IZS7 167 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 OR8J2Q8NGG1 315 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 OR56A1Q8NGH5 318 aa11.79□□□□□ -0.52
COL5A1-206ENST00000465877 SFXN5Q8TD22 340 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms