RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 ETV3LQ6ZN32 361 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 SLC29A4Q7RTT9 530 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 ST13P4Q8IZP2 240 aaPredicted RBP4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 CLYBLQ8N0X4 340 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 FBXW8Q8N3Y1 598 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 SLC15A4Q8N697 577 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 NAXEQ8NCW5 288 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 RHEBL1Q8TAI7 183 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 NEIL3Q8TAT5 605 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 LINC01560Q8TB33 94 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 WDR20Q8TBZ3 569 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 PAQR8Q8TEZ7 354 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 UBTD2Q8WUN7 234 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 ADIPOR1Q96A54 375 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 SARAFQ96BY9 339 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 FBXL20Q96IG2 436 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 TIMP4Q99727 224 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 GPATCH1Q9BRR8 931 aaKnown RBP4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 DOHHQ9BU89 302 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 MRPL1Q9BYD6 325 aaKnown RBP4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 WWTR1Q9GZV5 400 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 OR10A5Q9H207 317 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 DDX31Q9H8H2 851 aaKnown RBP4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 ANKRA2Q9H9E1 313 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 CXorf21Q9HAI6 301 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 ZBTB26Q9HCK0 441 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 SNX15Q9NRS6 342 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 CCM2LQ9NUG4 571 aaPredicted RBP4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 TEX10Q9NXF1 929 aaPredicted RBP4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 PHF11Q9UIL8 331 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 CNOT11Q9UKZ1 510 aaKnown RBP4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 DTX4Q9Y2E6 619 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 L3MBTL1Q9Y468 752 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 DSCAMO60469 2012 aa4.29□□□□□ -1.72
GTF3C3-208ENST00000455546 ANKRD17O75179 2603 aaKnown RBP4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 FOXO6A8MYZ6 492 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 POC1B-GALNT4F8VUJ3 575 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 FOXE1O00358 373 aaPredicted RBP4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 SYT5O00445 386 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 HCN1O60741 890 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 WDR1O75083 606 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 TRIM3O75382 744 aaPredicted RBP4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 ERAL1O75616 437 aaKnown RBP4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 CTAG2O75638 210 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 CLDN9O95484 217 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 EPPINO95925 133 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 PDYNP01213 254 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 C8BP07358 591 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 ABCB1P08183 1280 aaPredicted RBP4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 SBK3P0C264 359 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 SLC35E2P0CK97 266 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 NR2F6P10588 404 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 CPMP14384 443 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 CHN1P15882 459 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 BMP7P18075 431 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 BMP5P22003 454 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 TCEA1P23193 301 aaKnown RBP4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 SERPINB1P30740 379 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 LSP1P33241 339 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 CASP3P42574 277 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 KIR2DL3P43628 341 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 SLCO1A2P46721 670 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 STARP49675 285 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 CCNG1P51959 295 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 ZNF136P52737 540 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 NAGLUP54802 743 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 PHEXP78562 749 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 CAV1Q03135 178 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 SRYQ05066 204 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 DUSP2Q05923 314 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 MGAT2Q10469 447 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 FUT7Q11130 342 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 ILF2Q12905 390 aaKnown RBP4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 BIKQ13323 160 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 CUL3Q13618 768 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 EXOSC7Q15024 291 aaKnown RBP4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 PDCD1Q15116 288 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 CEBPEQ15744 281 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 NNATQ16517 81 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 NTRK2Q16620 822 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 MLANAQ16655 118 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 TRMT12Q53H54 448 aaKnown RBP4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 TECRLQ5HYJ1 363 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 TCHHL1Q5QJ38 904 aaPredicted RBP4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 TEX35Q5T0J7 233 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 DCST1Q5T197 706 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 CCNYL2Q5T2Q4 361 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 TTC19Q6DKK2 380 aaPredicted RBP4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 KLC3Q6P597 504 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 TEPPQ6URK8 271 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 SPNS3Q6ZMD2 512 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 YRDCQ86U90 279 aaKnown RBP4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 NUDT13Q86X67 352 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 ULK2Q8IYT8 1036 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 TAGAPQ8N103 731 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 LRRC25Q8N386 305 aaPredicted RBP4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 Q8N3U1 123 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 LIX1Q8N485 282 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 ZNF615Q8N8J6 731 aa4.28□□□□□ -1.72
GTF3C3-208ENST00000455546 PTGR2Q8N8N7 351 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms