RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 OR7G2Q8NG99 324 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 TCTEX1D2Q8WW35 142 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 MOAP1Q96BY2 351 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 ITPKCQ96DU7 683 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 MACROD1Q9BQ69 325 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 UBE2J1Q9Y385 318 aaPredicted RBP11.43□□□□□ -0.58
UBR4-205ENST00000417040 NOX1Q9Y5S8 564 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 SPEF2Q9C093 1822 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 CTDSP2O14595 271 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 CDK1P06493 297 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 CFL1P23528 166 aaKnown RBP11.43□□□□□ -0.58
UBR4-205ENST00000417040 CTHP32929 405 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 ZNF33AQ06730 810 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 LRRC25Q8N386 305 aaPredicted RBP11.43□□□□□ -0.58
UBR4-205ENST00000417040 OR52N2Q8NGI0 321 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 SLAMF9Q96A28 289 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 NEDD4LQ96PU5 975 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 SIAEQ9HAT2 523 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 HRASLS2Q9NWW9 162 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 USP36Q9P275 1121 aaKnown RBP11.43□□□□□ -0.58
UBR4-205ENST00000417040 MYH13Q9UKX3 1938 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 A0A0U1RQF3 1178 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 IFNA17P01571 189 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 HEXBP07686 556 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 NDUFS1P28331 727 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 SELENOWP63302 87 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 FKBP1BP68106 108 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 NKX6-1P78426 367 aaPredicted RBP11.43□□□□□ -0.58
UBR4-205ENST00000417040 GRHL2Q6ISB3 625 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 TMEM150AQ86TG1 271 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 OR5H2Q8NGV7 314 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 CREB3L4Q8TEY5 395 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 PHB2Q99623 299 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 CDC6Q99741 560 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 WASF3Q9UPY6 502 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 UGT2A1Q9Y4X1 527 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 SIM1P81133 766 aaPredicted RBP11.43□□□□□ -0.58
UBR4-205ENST00000417040 POU4F2Q12837 409 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 SF3A2Q15428 464 aaKnown RBP11.43□□□□□ -0.58
UBR4-205ENST00000417040 SPRYD7Q5W111 196 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 SLC22A10Q63ZE4 541 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 B3GLCTQ6Y288 498 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 C3P1Q6ZMU1 363 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 SNIP1Q8TAD8 396 aaKnown RBP11.43□□□□□ -0.58
UBR4-205ENST00000417040 HRH4Q9H3N8 390 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 LDAHQ9H6V9 325 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 POLMQ9NP87 494 aaPredicted RBP11.43□□□□□ -0.58
UBR4-205ENST00000417040 DCDC2BA2VCK2 349 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 UGT2B7P16662 529 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 BPIP17213 487 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 SCAPQ12770 1279 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 RNASE10Q5GAN6 216 aaKnown RBP11.43□□□□□ -0.58
UBR4-205ENST00000417040 C6orf132Q5T0Z8 1188 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 GLYATL1Q969I3 302 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 NT5C3BQ969T7 300 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 PBDC1Q9BVG4 233 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 MKRN2Q9H000 416 aaKnown RBP11.43□□□□□ -0.58
UBR4-205ENST00000417040 SLC28A3Q9HAS3 691 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 TUBG2Q9NRH3 451 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 TDP1Q9NUW8 608 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 C10orf71Q711Q0 1435 aa11.43□□□□□ -0.58
UBR4-205ENST00000417040 DCCP43146 1447 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 EPOP01588 193 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 FASLGP48023 281 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 BLKP51451 505 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 ZNF792Q3KQV3 632 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 PLAG1Q6DJT9 500 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 TECPR1Q7Z6L1 1165 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 ADAMTS19Q8TE59 1207 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 FRZBQ92765 325 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 GGHQ92820 318 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 SAMD11Q96NU1 681 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 PCDHB16Q9NRJ7 776 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 RNF215Q9Y6U7 377 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 ZNF487B1APH4 448 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 SGCEO43556 437 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 SSX4O60224 188 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 TAS2R38P59533 333 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 TATDN3Q17R31 274 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 ZNF542PQ5EBM4 170 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 CD163Q86VB7 1156 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 PM20D2Q8IYS1 436 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 OR51T1Q8NGJ9 327 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 GIMAP1Q8WWP7 306 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 ZNF442Q9H7R0 627 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 DDX31Q9H8H2 851 aaKnown RBP11.42□□□□□ -0.58
UBR4-205ENST00000417040 ACOT13Q9NPJ3 140 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 ABI3Q9P2A4 366 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 SPO11Q9Y5K1 396 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 XRN1Q8IZH2 1706 aaKnown RBP11.42□□□□□ -0.58
UBR4-205ENST00000417040 C3P01024 1663 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 YY2O15391 372 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 BMP4P12644 408 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 CRHBPP24387 322 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 KCTD18Q6PI47 426 aaPredicted RBP11.42□□□□□ -0.58
UBR4-205ENST00000417040 ALKAL2Q6UX46 152 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 ARL11Q969Q4 196 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 KLHL15Q96M94 604 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 PITX2Q99697 317 aa11.42□□□□□ -0.58
UBR4-205ENST00000417040 FN3KQ9H479 309 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms