RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 TCP10LQ8TDR4 215 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 DQX1Q8TE96 717 aaKnown RBP3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 DCAKDQ8WVC6 231 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 C1orf54Q8WWF1 131 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 STARD8Q92502 1023 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 ZNF707Q96C28 371 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 DUS3LQ96G46 650 aaKnown RBP3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 EGLN2Q96KS0 407 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 RPRD1AQ96P16 312 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 PANX3Q96QZ0 392 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 GAD1Q99259 594 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 PAFAH2Q99487 392 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 PARK7Q99497 189 aaKnown RBP3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 ZBTB18Q99592 522 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 CGREF1Q99674 301 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 YTHDF1Q9BYJ9 559 aaKnown RBP3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 BARHL1Q9BZE3 327 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 FAM124BQ9H5Z6 455 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 MRM3Q9HC36 420 aaKnown RBP3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 ZBTB20Q9HC78 741 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 PARVAQ9NVD7 372 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 TBC1D13Q9NVG8 400 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 TMEM9Q9P0T7 183 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 FBXL17Q9UF56 701 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 CHRNA9Q9UGM1 479 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 SLC7A8Q9UHI5 535 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 ATP6V1HQ9UI12 483 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 ANAPC7Q9UJX3 599 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 GMEB2Q9UKD1 530 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 PSMD13Q9UNM6 376 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 NIP7Q9Y221 180 aaKnown RBP eCLIP3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 PLEKHA6Q9Y2H5 1048 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 PLLPQ9Y342 182 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 FADS3Q9Y5Q0 445 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 ITGB4P16144 1822 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 NAV1Q8NEY1 1877 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 BAZ2BQ9UIF8 2168 aaKnown RBP3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 RBBP6Q7Z6E9 1792 aaKnown RBP3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 SCN4AP35499 1836 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 A0A0G2JND7 137 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 A0A0G2JNG1 304 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 OOEPA6NGQ2 149 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 SDR42E2A6NKP2 422 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 C15orf62A8K5M9 175 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 CYSRT1A8MQ03 144 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 CDRT15L2A8MXV6 281 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 SMIM1B2RUZ4 78 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 E9PI62 339 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 SLCO1B7G3V0H7 640 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 BLOC1S5-TXNDC5H3BN57 136 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 COPEO14579 308 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 CLIC2O15247 247 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 CHADO15335 359 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 MSH4O15457 936 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 RNASEH1O60930 286 aaKnown RBP3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 ECI2O75521 394 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 OR5F1O95221 314 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 BMP10O95393 424 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 APOHP02749 345 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 GBAP04062 536 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 KRT6BP04259 564 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 PCCBP05166 539 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 CALB1P05937 261 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 KRT7P08729 469 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 ZCCHC18P0CG32 403 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 GOLGA8HP0CJ92 632 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 SMIM18P0DKX4 95 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 THRAP10827 490 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 THRBP10828 461 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 S100A1P23297 94 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 NUP62P37198 522 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 BTDP43251 543 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 ALDH3B2P48448 385 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 PSMD8P48556 350 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 KRT6CP48668 564 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 MARCKSL1P49006 195 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 NUMBP49757 651 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 PRELPP51888 382 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 ATP12AP54707 1039 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 MFAP4P55083 255 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 MTTPP55157 894 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 SNU13P55769 128 aaKnown RBP3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 NLRP11P59045 1033 aaKnown RBP3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 GPX6P59796 221 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 DSTNP60981 165 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 ESRRGP62508 458 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 FOLH1Q04609 750 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 PDIA2Q13087 525 aaKnown RBP3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 SCGB2A2Q13296 93 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 PPIL2Q13356 520 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 KIR2DS5Q14953 304 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 HERC3Q15034 1050 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 BCL2A1Q16548 175 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 ZNF829Q3KNS6 432 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 CCDC153Q494R4 210 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 BCL7AQ4VC05 210 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 RAB6CQ53S08 254 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 IGSF11Q5DX21 431 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 LRIF1Q5T3J3 769 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms