RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 ARHGAP21Q5T5U3 1957 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 OTOGQ6ZRI0 2925 aa16.15■□□□□ 0.18
LSM5-204ENST00000409909 FAM90A27PA6NNH2 459 aa16.14■□□□□ 0.17
LSM5-204ENST00000409909 ESPNB1AK53 854 aa16.14■□□□□ 0.17
LSM5-204ENST00000409909 KDM4EB2RXH2 506 aaPredicted RBP16.14■□□□□ 0.17
LSM5-204ENST00000409909 ABCB7O75027 752 aa16.14■□□□□ 0.17
LSM5-204ENST00000409909 COQ9O75208 318 aa16.14■□□□□ 0.17
LSM5-204ENST00000409909 BCKDHAP12694 445 aa16.14■□□□□ 0.17
LSM5-204ENST00000409909 GABRA1P14867 456 aa16.14■□□□□ 0.17
LSM5-204ENST00000409909 ZNF155Q12901 538 aaPredicted RBP16.14■□□□□ 0.17
LSM5-204ENST00000409909 KRT71Q3SY84 523 aa16.14■□□□□ 0.17
LSM5-204ENST00000409909 GALNTL6Q49A17 601 aa16.14■□□□□ 0.17
LSM5-204ENST00000409909 NHSL2Q5HYW2 709 aa16.14■□□□□ 0.17
LSM5-204ENST00000409909 DCST1Q5T197 706 aa16.14■□□□□ 0.17
LSM5-204ENST00000409909 WDR53Q7Z5U6 358 aaPredicted RBP16.14■□□□□ 0.17
LSM5-204ENST00000409909 YRDCQ86U90 279 aaKnown RBP16.14■□□□□ 0.17
LSM5-204ENST00000409909 LIX1LQ8IVB5 337 aa16.14■□□□□ 0.17
LSM5-204ENST00000409909 FAM83FQ8NEG4 500 aaPredicted RBP16.14■□□□□ 0.17
LSM5-204ENST00000409909 RNF138Q8WVD3 245 aa16.14■□□□□ 0.17
LSM5-204ENST00000409909 EFHD2Q96C19 240 aaPredicted RBP16.14■□□□□ 0.17
LSM5-204ENST00000409909 ZNF764Q96H86 408 aaPredicted RBP16.14■□□□□ 0.17
LSM5-204ENST00000409909 C3orf30Q96M34 536 aa16.14■□□□□ 0.17
LSM5-204ENST00000409909 TREX2Q9BQ50 279 aaPredicted RBP16.14■□□□□ 0.17
LSM5-204ENST00000409909 REEP4Q9H6H4 257 aa16.14■□□□□ 0.17
LSM5-204ENST00000409909 ZDHHC2Q9UIJ5 367 aa16.14■□□□□ 0.17
LSM5-204ENST00000409909 C17orf51A8MQB3 221 aa16.13■□□□□ 0.17
LSM5-204ENST00000409909 B4DXG7 233 aa16.13■□□□□ 0.17
LSM5-204ENST00000409909 TBX19O60806 448 aa16.13■□□□□ 0.17
LSM5-204ENST00000409909 BMP7P18075 431 aa16.13■□□□□ 0.17
LSM5-204ENST00000409909 PNLIPRP2P54317 469 aa16.13■□□□□ 0.17
LSM5-204ENST00000409909 GAS1P54826 345 aa16.13■□□□□ 0.17
LSM5-204ENST00000409909 PSPHP78330 225 aa16.13■□□□□ 0.17
LSM5-204ENST00000409909 GAB1Q13480 694 aa16.13■□□□□ 0.17
LSM5-204ENST00000409909 PDE7AQ13946 482 aa16.13■□□□□ 0.17
LSM5-204ENST00000409909 EFR3AQ14156 821 aa16.13■□□□□ 0.17
LSM5-204ENST00000409909 XKR7Q5GH72 579 aa16.13■□□□□ 0.17
LSM5-204ENST00000409909 ZBTB9Q96C00 473 aa16.13■□□□□ 0.17
LSM5-204ENST00000409909 UGT2B28Q9BY64 529 aa16.13■□□□□ 0.17
LSM5-204ENST00000409909 PRDM14Q9GZV8 571 aa16.13■□□□□ 0.17
LSM5-204ENST00000409909 KCNJ16Q9NPI9 418 aa16.13■□□□□ 0.17
LSM5-204ENST00000409909 DDX18Q9NVP1 670 aaKnown RBP16.13■□□□□ 0.17
LSM5-204ENST00000409909 TMED5Q9Y3A6 229 aa16.13■□□□□ 0.17
LSM5-204ENST00000409909 OR10H1Q9Y4A9 318 aa16.13■□□□□ 0.17
LSM5-204ENST00000409909 AHRRA9YTQ3 701 aa16.12■□□□□ 0.17
LSM5-204ENST00000409909 RGS16O15492 202 aaPredicted RBP16.12■□□□□ 0.17
LSM5-204ENST00000409909 PDPK1O15530 556 aa16.12■□□□□ 0.17
LSM5-204ENST00000409909 PEX11AO75192 247 aa16.12■□□□□ 0.17
LSM5-204ENST00000409909 CBR3O75828 277 aa16.12■□□□□ 0.17
LSM5-204ENST00000409909 CYP4B1P13584 511 aa16.12■□□□□ 0.17
LSM5-204ENST00000409909 IGFBP2P18065 325 aa16.12■□□□□ 0.17
LSM5-204ENST00000409909 IL12BP29460 328 aa16.12■□□□□ 0.17
LSM5-204ENST00000409909 KRT20P35900 424 aa16.12■□□□□ 0.17
LSM5-204ENST00000409909 SERPINB5P36952 375 aa16.12■□□□□ 0.17
LSM5-204ENST00000409909 FRKP42685 505 aaPredicted RBP16.12■□□□□ 0.17
LSM5-204ENST00000409909 ZFP36L2P47974 494 aaKnown RBP16.12■□□□□ 0.17
LSM5-204ENST00000409909 WNT3P56703 355 aa16.12■□□□□ 0.17
LSM5-204ENST00000409909 HSPB3Q12988 150 aa16.12■□□□□ 0.17
LSM5-204ENST00000409909 CYP27C1Q4G0S4 372 aa16.12■□□□□ 0.17
LSM5-204ENST00000409909 ACSF3Q4G176 576 aaPredicted RBP16.12■□□□□ 0.17
LSM5-204ENST00000409909 OR5M10Q6IEU7 315 aa16.12■□□□□ 0.17
LSM5-204ENST00000409909 MEX3BQ6ZN04 569 aaKnown RBP16.12■□□□□ 0.17
LSM5-204ENST00000409909 GDF7Q7Z4P5 450 aa16.12■□□□□ 0.17
LSM5-204ENST00000409909 EXOC3L1Q86VI1 746 aa16.12■□□□□ 0.17
LSM5-204ENST00000409909 PLCZ1Q86YW0 608 aa16.12■□□□□ 0.17
LSM5-204ENST00000409909 ABTB1Q969K4 478 aaPredicted RBP16.12■□□□□ 0.17
LSM5-204ENST00000409909 PPCDCQ96CD2 204 aa16.12■□□□□ 0.17
LSM5-204ENST00000409909 WDYHV1Q96HA8 205 aa16.12■□□□□ 0.17
LSM5-204ENST00000409909 PKNOX2Q96KN3 472 aa16.12■□□□□ 0.17
LSM5-204ENST00000409909 FLRT3Q9NZU0 649 aa16.12■□□□□ 0.17
LSM5-204ENST00000409909 SH3BP4Q9P0V3 963 aa16.12■□□□□ 0.17
LSM5-204ENST00000409909 FBXL2Q9UKC9 423 aa16.12■□□□□ 0.17
LSM5-204ENST00000409909 WIF1Q9Y5W5 379 aa16.12■□□□□ 0.17
LSM5-204ENST00000409909 KIAA1549Q9HCM3 1950 aa16.11■□□□□ 0.17
LSM5-204ENST00000409909 CTIFO43310 598 aaKnown RBP16.11■□□□□ 0.17
LSM5-204ENST00000409909 FADS1O60427 444 aa16.11■□□□□ 0.17
LSM5-204ENST00000409909 EPPINO95925 133 aa16.11■□□□□ 0.17
LSM5-204ENST00000409909 IFI6P09912 130 aa16.11■□□□□ 0.17
LSM5-204ENST00000409909 MSX1P28360 303 aa16.11■□□□□ 0.17
LSM5-204ENST00000409909 SERPINB4P48594 390 aa16.11■□□□□ 0.17
LSM5-204ENST00000409909 RIPPLY2Q5TAB7 128 aa16.11■□□□□ 0.17
LSM5-204ENST00000409909 NUDCD3Q8IVD9 361 aa16.11■□□□□ 0.17
LSM5-204ENST00000409909 HOMEZQ8IX15 550 aa16.11■□□□□ 0.17
LSM5-204ENST00000409909 LMF2Q9BU23 707 aaKnown RBP16.11■□□□□ 0.17
LSM5-204ENST00000409909 OR2B2Q9GZK3 357 aa16.11■□□□□ 0.17
LSM5-204ENST00000409909 ZNF395Q9H8N7 513 aaPredicted RBP16.11■□□□□ 0.17
LSM5-204ENST00000409909 CBLCQ9ULV8 474 aa16.11■□□□□ 0.17
LSM5-204ENST00000409909 CAMK2AQ9UQM7 478 aa16.11■□□□□ 0.17
LSM5-204ENST00000409909 WDR91A4D1P6 747 aa16.1■□□□□ 0.17
LSM5-204ENST00000409909 ITM2AO43736 263 aa16.1■□□□□ 0.17
LSM5-204ENST00000409909 LYPLA1O75608 230 aaPredicted RBP16.1■□□□□ 0.17
LSM5-204ENST00000409909 EFNA1P20827 205 aaPredicted RBP16.1■□□□□ 0.17
LSM5-204ENST00000409909 GRK2P25098 689 aa16.1■□□□□ 0.17
LSM5-204ENST00000409909 MAP3K8P41279 467 aa16.1■□□□□ 0.17
LSM5-204ENST00000409909 ASMTP46597 345 aa16.1■□□□□ 0.17
LSM5-204ENST00000409909 MPP2Q14168 576 aa16.1■□□□□ 0.17
LSM5-204ENST00000409909 TNFAIP8L3Q5GJ75 292 aa16.1■□□□□ 0.17
LSM5-204ENST00000409909 C6orf136Q5SQH8 315 aa16.1■□□□□ 0.17
LSM5-204ENST00000409909 LURAP1LQ8IV03 231 aa16.1■□□□□ 0.17
LSM5-204ENST00000409909 NAXEQ8NCW5 288 aa16.1■□□□□ 0.17
LSM5-204ENST00000409909 TNIP2Q8NFZ5 429 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms