RNA–Protein interactions for RNA: ENST00000639004.1

FAM49B-230, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-230ENST00000639004 ARMCX1Q9P291 453 aa4.76□□□□□ -1.65
FAM49B-230ENST00000639004 PURGQ9UJV8 347 aaKnown RBP4.76□□□□□ -1.65
FAM49B-230ENST00000639004 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.76□□□□□ -1.65
FAM49B-230ENST00000639004 ARHGEF12Q9NZN5 1544 aa4.76□□□□□ -1.65
FAM49B-230ENST00000639004 DNMT1P26358 1616 aaKnown RBP4.75□□□□□ -1.65
FAM49B-230ENST00000639004 ADGRL2O95490 1459 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 PZPP20742 1482 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 TTC37Q6PGP7 1564 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 C9orf84Q5VXU9 1444 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 ZNF840PA6NDX5 716 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 E9PAM4 449 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 LRRTM2O43300 516 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 PRPSAP2O60256 369 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 GPRIN2O60269 458 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 ZNF354AO60765 605 aaPredicted RBP4.75□□□□□ -1.65
FAM49B-230ENST00000639004 PDE5AO76074 875 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 NUDT14O95848 222 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 RALAP11233 206 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 CCNA2P20248 432 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 MAPK3P27361 379 aaPredicted RBP4.75□□□□□ -1.65
FAM49B-230ENST00000639004 PRDX2P32119 198 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 SLC26A5P58743 744 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 KRTAP10-12P60413 245 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 TRA2BP62995 288 aaKnown RBP4.75□□□□□ -1.65
FAM49B-230ENST00000639004 FUT7Q11130 342 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 PDIA5Q14554 519 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 LRIT3Q3SXY7 679 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 STOX1Q6ZVD7 989 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 GOLGA7Q7Z5G4 137 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 GPBP1Q86WP2 473 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 ERC1Q8IUD2 1116 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 ARL14Q8N4G2 192 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 CRYGNQ8WXF5 182 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 DLX4Q92988 240 aaPredicted RBP4.75□□□□□ -1.65
FAM49B-230ENST00000639004 TSPY26PQ9H489 355 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 ESM1Q9NQ30 184 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 RPS10P5Q9NQ39 176 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 CENPMQ9NSP4 180 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 SOHLH2Q9NX45 425 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 BCAP29Q9UHQ4 241 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 ANKRD30BQ9BXX2 1392 aa4.75□□□□□ -1.65
FAM49B-230ENST00000639004 IGHV3OR16-12A0A075B7B8 117 aa4.74□□□□□ -1.65
FAM49B-230ENST00000639004 A0A087WWV3 80 aa4.74□□□□□ -1.65
FAM49B-230ENST00000639004 A0A0J9YVX5 310 aa4.74□□□□□ -1.65
FAM49B-230ENST00000639004 BCL2L11O43521 198 aa4.74□□□□□ -1.65
FAM49B-230ENST00000639004 ZNF253O75346 499 aa4.74□□□□□ -1.65
FAM49B-230ENST00000639004 KBTBD11O94819 623 aa4.74□□□□□ -1.65
FAM49B-230ENST00000639004 IGHV3-9P01782 118 aa4.74□□□□□ -1.65
FAM49B-230ENST00000639004 RPA1P27694 616 aa4.74□□□□□ -1.65
FAM49B-230ENST00000639004 BRCC3P46736 316 aa4.74□□□□□ -1.65
FAM49B-230ENST00000639004 CSRP3P50461 194 aa4.74□□□□□ -1.65
FAM49B-230ENST00000639004 GABPB1Q06547 395 aaPredicted RBP4.74□□□□□ -1.65
FAM49B-230ENST00000639004 CRMP1Q14194 572 aa4.74□□□□□ -1.65
FAM49B-230ENST00000639004 KARSQ15046 597 aaKnown RBP4.74□□□□□ -1.65
FAM49B-230ENST00000639004 LTB4RQ15722 352 aa4.74□□□□□ -1.65
FAM49B-230ENST00000639004 C15orf32Q32M92 178 aa4.74□□□□□ -1.65
FAM49B-230ENST00000639004 CNPY1Q3B7I2 92 aa4.74□□□□□ -1.65
FAM49B-230ENST00000639004 RBM43Q6ZSC3 357 aaKnown RBP4.74□□□□□ -1.65
FAM49B-230ENST00000639004 SLC22A18ASQ8N1D0 253 aa4.74□□□□□ -1.65
FAM49B-230ENST00000639004 MINDY2Q8NBR6 621 aa4.74□□□□□ -1.65
FAM49B-230ENST00000639004 CNNM3Q8NE01 707 aa4.74□□□□□ -1.65
FAM49B-230ENST00000639004 WDR36Q8NI36 951 aaKnown RBP4.74□□□□□ -1.65
FAM49B-230ENST00000639004 C14orf79Q96F83 325 aa4.74□□□□□ -1.65
FAM49B-230ENST00000639004 MCCC1Q96RQ3 725 aaPredicted RBP4.74□□□□□ -1.65
FAM49B-230ENST00000639004 NMNAT2Q9BZQ4 307 aa4.74□□□□□ -1.65
FAM49B-230ENST00000639004 PNNQ9H307 717 aaKnown RBP4.74□□□□□ -1.65
FAM49B-230ENST00000639004 MBD2Q9UBB5 411 aa4.74□□□□□ -1.65
FAM49B-230ENST00000639004 ZNF490Q9ULM2 529 aaPredicted RBP4.74□□□□□ -1.65
FAM49B-230ENST00000639004 FZR1Q9UM11 496 aa4.74□□□□□ -1.65
FAM49B-230ENST00000639004 SAMD9LQ8IVG5 1584 aa4.74□□□□□ -1.65
FAM49B-230ENST00000639004 PLCH2O75038 1416 aa4.73□□□□□ -1.65
FAM49B-230ENST00000639004 TRAPPC8Q9Y2L5 1435 aa4.73□□□□□ -1.65
FAM49B-230ENST00000639004 TRAV9-2A0A087WT02 112 aa4.73□□□□□ -1.65
FAM49B-230ENST00000639004 TRIM49BA6NDI0 452 aa4.73□□□□□ -1.65
FAM49B-230ENST00000639004 H3BMH7 237 aa4.73□□□□□ -1.65
FAM49B-230ENST00000639004 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.73□□□□□ -1.65
FAM49B-230ENST00000639004 PDLIM1O00151 329 aa4.73□□□□□ -1.65
FAM49B-230ENST00000639004 RASGRF2O14827 1237 aa4.73□□□□□ -1.65
FAM49B-230ENST00000639004 SNRPCP09234 159 aaKnown RBP4.73□□□□□ -1.65
FAM49B-230ENST00000639004 RFC2P35250 354 aa4.73□□□□□ -1.65
FAM49B-230ENST00000639004 HMGCLP35914 325 aa4.73□□□□□ -1.65
FAM49B-230ENST00000639004 ARHGDIAP52565 204 aa4.73□□□□□ -1.65
FAM49B-230ENST00000639004 ZNF33BQ06732 778 aa4.73□□□□□ -1.65
FAM49B-230ENST00000639004 SMC1AQ14683 1233 aaKnown RBP4.73□□□□□ -1.65
FAM49B-230ENST00000639004 ZNF774Q6NX45 483 aa4.73□□□□□ -1.65
FAM49B-230ENST00000639004 ZCCHC12Q6PEW1 402 aa4.73□□□□□ -1.65
FAM49B-230ENST00000639004 CCBE1Q6UXH8 406 aaPredicted RBP4.73□□□□□ -1.65
FAM49B-230ENST00000639004 PRSS48Q7RTY5 328 aa4.73□□□□□ -1.65
FAM49B-230ENST00000639004 ARFGAP2Q8N6H7 521 aa4.73□□□□□ -1.65
FAM49B-230ENST00000639004 TBCKQ8TEA7 893 aa4.73□□□□□ -1.65
FAM49B-230ENST00000639004 TSPAN18Q96SJ8 248 aa4.73□□□□□ -1.65
FAM49B-230ENST00000639004 TRIM9Q9C026 710 aa4.73□□□□□ -1.65
FAM49B-230ENST00000639004 KRT23Q9C075 422 aa4.73□□□□□ -1.65
FAM49B-230ENST00000639004 GPR83Q9NYM4 423 aa4.73□□□□□ -1.65
FAM49B-230ENST00000639004 RAI14Q9P0K7 980 aa4.73□□□□□ -1.65
FAM49B-230ENST00000639004 FKBP7Q9Y680 259 aa4.73□□□□□ -1.65
FAM49B-230ENST00000639004 ANKRD30AQ9BXX3 1397 aa4.73□□□□□ -1.65
FAM49B-230ENST00000639004 SHANK2Q9UPX8 1470 aa4.73□□□□□ -1.65
FAM49B-230ENST00000639004 ANKRD50Q9ULJ7 1429 aa4.72□□□□□ -1.65
FAM49B-230ENST00000639004 ZCCHC11Q5TAX3 1644 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms