RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 BCKDHAP12694 445 aa20.41■□□□□ 0.86
GTF2F1-204ENST00000594965 GDF1P27539 372 aa20.41■□□□□ 0.86
GTF2F1-204ENST00000594965 PDE7AQ13946 482 aa20.41■□□□□ 0.86
GTF2F1-204ENST00000594965 RTL6Q6ICC9 239 aa20.41■□□□□ 0.86
GTF2F1-204ENST00000594965 ZNF551Q7Z340 670 aaPredicted RBP20.41■□□□□ 0.86
GTF2F1-204ENST00000594965 PACS2Q86VP3 889 aa20.41■□□□□ 0.86
GTF2F1-204ENST00000594965 OR2L13Q8N349 312 aa20.41■□□□□ 0.86
GTF2F1-204ENST00000594965 NEIL3Q8TAT5 605 aa20.41■□□□□ 0.86
GTF2F1-204ENST00000594965 CIDECQ96AQ7 238 aaPredicted RBP20.41■□□□□ 0.86
GTF2F1-204ENST00000594965 ELP4Q96EB1 424 aa20.41■□□□□ 0.86
GTF2F1-204ENST00000594965 METTL7AQ9H8H3 244 aa20.41■□□□□ 0.86
GTF2F1-204ENST00000594965 ZNF395Q9H8N7 513 aaPredicted RBP20.41■□□□□ 0.86
GTF2F1-204ENST00000594965 GALNT9Q9HCQ5 603 aa20.41■□□□□ 0.86
GTF2F1-204ENST00000594965 TAS2R9Q9NYW1 312 aa20.41■□□□□ 0.86
GTF2F1-204ENST00000594965 C15orf41Q9Y2V0 281 aa20.41■□□□□ 0.86
GTF2F1-204ENST00000594965 FAM215AQ9Y5M1 114 aa20.41■□□□□ 0.86
GTF2F1-204ENST00000594965 C2orf72A6NCS6 295 aa20.4■□□□□ 0.86
GTF2F1-204ENST00000594965 GNB5O14775 395 aa20.4■□□□□ 0.86
GTF2F1-204ENST00000594965 ICOSLGO75144 302 aa20.4■□□□□ 0.86
GTF2F1-204ENST00000594965 REM1O75628 298 aa20.4■□□□□ 0.86
GTF2F1-204ENST00000594965 HPNP05981 417 aa20.4■□□□□ 0.86
GTF2F1-204ENST00000594965 PTPN6P29350 595 aa20.4■□□□□ 0.86
GTF2F1-204ENST00000594965 FRKP42685 505 aaPredicted RBP20.4■□□□□ 0.86
GTF2F1-204ENST00000594965 MASP1P48740 699 aa20.4■□□□□ 0.86
GTF2F1-204ENST00000594965 TRPC1P48995 793 aa20.4■□□□□ 0.86
GTF2F1-204ENST00000594965 TIGD3Q6B0B8 471 aa20.4■□□□□ 0.86
GTF2F1-204ENST00000594965 TMEM211Q6ICI0 200 aa20.4■□□□□ 0.86
GTF2F1-204ENST00000594965 SLC30A6Q6NXT4 461 aa20.4■□□□□ 0.86
GTF2F1-204ENST00000594965 ZNF585AQ6P3V2 769 aa20.4■□□□□ 0.86
GTF2F1-204ENST00000594965 SLC44A2Q8IWA5 706 aaPredicted RBP20.4■□□□□ 0.86
GTF2F1-204ENST00000594965 SARAFQ96BY9 339 aa20.4■□□□□ 0.86
GTF2F1-204ENST00000594965 PPP3R2Q96LZ3 170 aa20.4■□□□□ 0.86
GTF2F1-204ENST00000594965 COL21A1Q96P44 957 aa20.4■□□□□ 0.86
GTF2F1-204ENST00000594965 OSBPL11Q9BXB4 747 aa20.4■□□□□ 0.86
GTF2F1-204ENST00000594965 C20orf27Q9GZN8 174 aa20.4■□□□□ 0.86
GTF2F1-204ENST00000594965 CENPHQ9H3R5 247 aa20.4■□□□□ 0.86
GTF2F1-204ENST00000594965 PCNX3Q9H6A9 2034 aa20.4■□□□□ 0.86
GTF2F1-204ENST00000594965 EXO5Q9H790 373 aa20.4■□□□□ 0.86
GTF2F1-204ENST00000594965 ACAD8Q9UKU7 415 aa20.4■□□□□ 0.86
GTF2F1-204ENST00000594965 C19orf84I3L1E1 186 aa20.39■□□□□ 0.85
GTF2F1-204ENST00000594965 SNPHO15079 494 aa20.39■□□□□ 0.85
GTF2F1-204ENST00000594965 TM9SF1O15321 606 aa20.39■□□□□ 0.85
GTF2F1-204ENST00000594965 PDPK1O15530 556 aa20.39■□□□□ 0.85
GTF2F1-204ENST00000594965 COQ9O75208 318 aa20.39■□□□□ 0.85
GTF2F1-204ENST00000594965 SKAP2O75563 359 aaPredicted RBP20.39■□□□□ 0.85
GTF2F1-204ENST00000594965 IFI6P09912 130 aa20.39■□□□□ 0.85
GTF2F1-204ENST00000594965 ACVR2AP27037 513 aa20.39■□□□□ 0.85
GTF2F1-204ENST00000594965 CDK9P50750 372 aaKnown RBP20.39■□□□□ 0.85
GTF2F1-204ENST00000594965 NUP107P57740 925 aa20.39■□□□□ 0.85
GTF2F1-204ENST00000594965 ZNF155Q12901 538 aaPredicted RBP20.39■□□□□ 0.85
GTF2F1-204ENST00000594965 SNTA1Q13424 505 aa20.39■□□□□ 0.85
GTF2F1-204ENST00000594965 CHI3L2Q15782 390 aa20.39■□□□□ 0.85
GTF2F1-204ENST00000594965 ANGPTL8Q6UXH0 198 aa20.39■□□□□ 0.85
GTF2F1-204ENST00000594965 LRIG3Q6UXM1 1119 aa20.39■□□□□ 0.85
GTF2F1-204ENST00000594965 RNF138Q8WVD3 245 aa20.39■□□□□ 0.85
GTF2F1-204ENST00000594965 SDCCAG3Q96C92 435 aa20.39■□□□□ 0.85
GTF2F1-204ENST00000594965 PGM2Q96G03 612 aa20.39■□□□□ 0.85
GTF2F1-204ENST00000594965 ADOQ96SZ5 270 aa20.39■□□□□ 0.85
GTF2F1-204ENST00000594965 ACTL7BQ9Y614 415 aa20.39■□□□□ 0.85
GTF2F1-204ENST00000594965 UNC79Q9P2D8 2635 aa20.39■□□□□ 0.85
GTF2F1-204ENST00000594965 NAV2Q8IVL1 2488 aa20.38■□□□□ 0.85
GTF2F1-204ENST00000594965 KIAA1549Q9HCM3 1950 aa20.38■□□□□ 0.85
GTF2F1-204ENST00000594965 PRAMEF25A6NGN4 478 aa20.38■□□□□ 0.85
GTF2F1-204ENST00000594965 BIRC5O15392 142 aa20.38■□□□□ 0.85
GTF2F1-204ENST00000594965 PEX11AO75192 247 aa20.38■□□□□ 0.85
GTF2F1-204ENST00000594965 TRAPPC6AO75865 159 aa20.38■□□□□ 0.85
GTF2F1-204ENST00000594965 SERPINE1P05121 402 aa20.38■□□□□ 0.85
GTF2F1-204ENST00000594965 PNLIPRP2P54317 469 aa20.38■□□□□ 0.85
GTF2F1-204ENST00000594965 PMPCAQ10713 525 aa20.38■□□□□ 0.85
GTF2F1-204ENST00000594965 C6orf136Q5SQH8 315 aa20.38■□□□□ 0.85
GTF2F1-204ENST00000594965 WDR53Q7Z5U6 358 aaPredicted RBP20.38■□□□□ 0.85
GTF2F1-204ENST00000594965 WDSUB1Q8N9V3 476 aa20.38■□□□□ 0.85
GTF2F1-204ENST00000594965 OR1J4Q8NGS1 313 aa20.38■□□□□ 0.85
GTF2F1-204ENST00000594965 PPCDCQ96CD2 204 aa20.38■□□□□ 0.85
GTF2F1-204ENST00000594965 TMCO6Q96DC7 493 aa20.38■□□□□ 0.85
GTF2F1-204ENST00000594965 DDX18Q9NVP1 670 aaKnown RBP20.38■□□□□ 0.85
GTF2F1-204ENST00000594965 KLRF1Q9NZS2 232 aa20.38■□□□□ 0.85
GTF2F1-204ENST00000594965 SH3BP4Q9P0V3 963 aa20.38■□□□□ 0.85
GTF2F1-204ENST00000594965 RNF6Q9Y252 685 aa20.38■□□□□ 0.85
GTF2F1-204ENST00000594965 CRYBG3Q68DQ2 2970 aa20.37■□□□□ 0.85
GTF2F1-204ENST00000594965 FIGNL2A6NMB9 653 aa20.37■□□□□ 0.85
GTF2F1-204ENST00000594965 ABCB7O75027 752 aa20.37■□□□□ 0.85
GTF2F1-204ENST00000594965 ELAVL4P26378 380 aaKnown RBP20.37■□□□□ 0.85
GTF2F1-204ENST00000594965 ASMTP46597 345 aa20.37■□□□□ 0.85
GTF2F1-204ENST00000594965 PSPHP78330 225 aa20.37■□□□□ 0.85
GTF2F1-204ENST00000594965 CRYZQ08257 329 aaKnown RBP20.37■□□□□ 0.85
GTF2F1-204ENST00000594965 HSPB3Q12988 150 aa20.37■□□□□ 0.85
GTF2F1-204ENST00000594965 EIPR1Q53HC9 387 aa20.37■□□□□ 0.85
GTF2F1-204ENST00000594965 WLSQ5T9L3 541 aa20.37■□□□□ 0.85
GTF2F1-204ENST00000594965 LARP4Q71RC2 724 aaKnown RBP eCLIP20.37■□□□□ 0.85
GTF2F1-204ENST00000594965 LIX1Q8N485 282 aa20.37■□□□□ 0.85
GTF2F1-204ENST00000594965 ZNF781Q8N8C0 355 aa20.37■□□□□ 0.85
GTF2F1-204ENST00000594965 PPP1R14CQ8TAE6 165 aa20.37■□□□□ 0.85
GTF2F1-204ENST00000594965 EFHD2Q96C19 240 aaPredicted RBP20.37■□□□□ 0.85
GTF2F1-204ENST00000594965 MTERF3Q96E29 417 aa20.37■□□□□ 0.85
GTF2F1-204ENST00000594965 TTYH2Q9BSA4 534 aa20.37■□□□□ 0.85
GTF2F1-204ENST00000594965 LMF2Q9BU23 707 aaKnown RBP20.37■□□□□ 0.85
GTF2F1-204ENST00000594965 C1orf50Q9BV19 199 aa20.37■□□□□ 0.85
GTF2F1-204ENST00000594965 NUP214P35658 2090 aaPredicted RBP20.37■□□□□ 0.85
GTF2F1-204ENST00000594965 TMEM114B3SHH9 223 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms