RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 OR4N2Q8NGD1 307 aa16.92■□□□□ 0.3
SHKBP1-202ENST00000593764 OR5M9Q8NGP3 310 aa16.92■□□□□ 0.3
SHKBP1-202ENST00000593764 CIDECQ96AQ7 238 aaPredicted RBP16.92■□□□□ 0.3
SHKBP1-202ENST00000593764 GNRHR2Q96P88 292 aa16.92■□□□□ 0.3
SHKBP1-202ENST00000593764 C20orf27Q9GZN8 174 aa16.92■□□□□ 0.3
SHKBP1-202ENST00000593764 TP63Q9H3D4 680 aaPredicted RBP16.92■□□□□ 0.3
SHKBP1-202ENST00000593764 LDAHQ9H6V9 325 aa16.92■□□□□ 0.3
SHKBP1-202ENST00000593764 PNPLA3Q9NST1 481 aa16.92■□□□□ 0.3
SHKBP1-202ENST00000593764 SPRR3Q9UBC9 169 aa16.92■□□□□ 0.3
SHKBP1-202ENST00000593764 KLF2Q9Y5W3 355 aaPredicted RBP16.92■□□□□ 0.3
SHKBP1-202ENST00000593764 OR6C70A6NIJ9 312 aa16.91■□□□□ 0.3
SHKBP1-202ENST00000593764 BCKDKO14874 412 aa16.91■□□□□ 0.3
SHKBP1-202ENST00000593764 TSPAN2O60636 221 aa16.91■□□□□ 0.3
SHKBP1-202ENST00000593764 ICOSLGO75144 302 aa16.91■□□□□ 0.3
SHKBP1-202ENST00000593764 REM1O75628 298 aa16.91■□□□□ 0.3
SHKBP1-202ENST00000593764 SERPINE1P05121 402 aa16.91■□□□□ 0.3
SHKBP1-202ENST00000593764 GRNP28799 593 aaKnown RBP16.91■□□□□ 0.3
SHKBP1-202ENST00000593764 FRKP42685 505 aaPredicted RBP16.91■□□□□ 0.3
SHKBP1-202ENST00000593764 MAN2A2P49641 1150 aa16.91■□□□□ 0.3
SHKBP1-202ENST00000593764 C6orf136Q5SQH8 315 aa16.91■□□□□ 0.3
SHKBP1-202ENST00000593764 BEND6Q5SZJ8 279 aaPredicted RBP16.91■□□□□ 0.3
SHKBP1-202ENST00000593764 SP5Q6BEB4 398 aaPredicted RBP16.91■□□□□ 0.3
SHKBP1-202ENST00000593764 SLC44A2Q8IWA5 706 aaPredicted RBP16.91■□□□□ 0.3
SHKBP1-202ENST00000593764 EID3Q8N140 333 aa16.91■□□□□ 0.3
SHKBP1-202ENST00000593764 SLC35A4Q96G79 324 aa16.91■□□□□ 0.3
SHKBP1-202ENST00000593764 TMEM41AQ96HV5 264 aa16.91■□□□□ 0.3
SHKBP1-202ENST00000593764 PPP3R2Q96LZ3 170 aa16.91■□□□□ 0.3
SHKBP1-202ENST00000593764 COL21A1Q96P44 957 aa16.91■□□□□ 0.3
SHKBP1-202ENST00000593764 SLC6A15Q9H2J7 730 aa16.91■□□□□ 0.3
SHKBP1-202ENST00000593764 GALNT9Q9HCQ5 603 aa16.91■□□□□ 0.3
SHKBP1-202ENST00000593764 C2orf72A6NCS6 295 aa16.9■□□□□ 0.3
SHKBP1-202ENST00000593764 PRSS44E7EML9 344 aa16.9■□□□□ 0.3
SHKBP1-202ENST00000593764 PDPK1O15530 556 aa16.9■□□□□ 0.3
SHKBP1-202ENST00000593764 COQ9O75208 318 aa16.9■□□□□ 0.3
SHKBP1-202ENST00000593764 SKAP2O75563 359 aaPredicted RBP16.9■□□□□ 0.3
SHKBP1-202ENST00000593764 ZWINTO95229 277 aa16.9■□□□□ 0.3
SHKBP1-202ENST00000593764 IFI6P09912 130 aa16.9■□□□□ 0.3
SHKBP1-202ENST00000593764 GDF1P27539 372 aa16.9■□□□□ 0.3
SHKBP1-202ENST00000593764 ASMTP46597 345 aa16.9■□□□□ 0.3
SHKBP1-202ENST00000593764 ABCE1P61221 599 aaKnown RBP16.9■□□□□ 0.3
SHKBP1-202ENST00000593764 SNTA1Q13424 505 aa16.9■□□□□ 0.3
SHKBP1-202ENST00000593764 TIGD3Q6B0B8 471 aa16.9■□□□□ 0.3
SHKBP1-202ENST00000593764 SLC30A6Q6NXT4 461 aa16.9■□□□□ 0.3
SHKBP1-202ENST00000593764 PPP1R14CQ8TAE6 165 aa16.9■□□□□ 0.3
SHKBP1-202ENST00000593764 NEIL3Q8TAT5 605 aa16.9■□□□□ 0.3
SHKBP1-202ENST00000593764 PPCDCQ96CD2 204 aa16.9■□□□□ 0.3
SHKBP1-202ENST00000593764 ADOQ96SZ5 270 aa16.9■□□□□ 0.3
SHKBP1-202ENST00000593764 METTL7AQ9H8H3 244 aa16.9■□□□□ 0.3
SHKBP1-202ENST00000593764 KCNK9Q9NPC2 374 aa16.9■□□□□ 0.3
SHKBP1-202ENST00000593764 SH3BP4Q9P0V3 963 aa16.9■□□□□ 0.3
SHKBP1-202ENST00000593764 B4GALT7Q9UBV7 327 aa16.9■□□□□ 0.3
SHKBP1-202ENST00000593764 C15orf41Q9Y2V0 281 aa16.9■□□□□ 0.3
SHKBP1-202ENST00000593764 CACNA1CQ13936 2221 aa16.89■□□□□ 0.29
SHKBP1-202ENST00000593764 TMEM114B3SHH9 223 aa16.89■□□□□ 0.29
SHKBP1-202ENST00000593764 ABCB7O75027 752 aa16.89■□□□□ 0.29
SHKBP1-202ENST00000593764 HSPA4LO95757 839 aa16.89■□□□□ 0.29
SHKBP1-202ENST00000593764 HPNP05981 417 aa16.89■□□□□ 0.29
SHKBP1-202ENST00000593764 HTR1EP28566 365 aa16.89■□□□□ 0.29
SHKBP1-202ENST00000593764 PTPN6P29350 595 aa16.89■□□□□ 0.29
SHKBP1-202ENST00000593764 MASP1P48740 699 aa16.89■□□□□ 0.29
SHKBP1-202ENST00000593764 TRPC1P48995 793 aa16.89■□□□□ 0.29
SHKBP1-202ENST00000593764 CDK9P50750 372 aaKnown RBP16.89■□□□□ 0.29
SHKBP1-202ENST00000593764 HSPB3Q12988 150 aa16.89■□□□□ 0.29
SHKBP1-202ENST00000593764 ZNF630Q2M218 657 aaPredicted RBP16.89■□□□□ 0.29
SHKBP1-202ENST00000593764 ATP6AP1LQ52LC2 224 aa16.89■□□□□ 0.29
SHKBP1-202ENST00000593764 RTL6Q6ICC9 239 aa16.89■□□□□ 0.29
SHKBP1-202ENST00000593764 WDR53Q7Z5U6 358 aaPredicted RBP16.89■□□□□ 0.29
SHKBP1-202ENST00000593764 LIX1Q8N485 282 aa16.89■□□□□ 0.29
SHKBP1-202ENST00000593764 ZNF781Q8N8C0 355 aa16.89■□□□□ 0.29
SHKBP1-202ENST00000593764 RNF138Q8WVD3 245 aa16.89■□□□□ 0.29
SHKBP1-202ENST00000593764 SARAFQ96BY9 339 aa16.89■□□□□ 0.29
SHKBP1-202ENST00000593764 MTERF3Q96E29 417 aa16.89■□□□□ 0.29
SHKBP1-202ENST00000593764 SORT1Q99523 831 aa16.89■□□□□ 0.29
SHKBP1-202ENST00000593764 EXO5Q9H790 373 aa16.89■□□□□ 0.29
SHKBP1-202ENST00000593764 DDX18Q9NVP1 670 aaKnown RBP16.89■□□□□ 0.29
SHKBP1-202ENST00000593764 NTMQ9P121 344 aa16.89■□□□□ 0.29
SHKBP1-202ENST00000593764 ATP6V1HQ9UI12 483 aa16.89■□□□□ 0.29
SHKBP1-202ENST00000593764 ACAD8Q9UKU7 415 aa16.89■□□□□ 0.29
SHKBP1-202ENST00000593764 PHF3Q92576 2039 aaKnown RBP16.89■□□□□ 0.29
SHKBP1-202ENST00000593764 MED12Q93074 2177 aa16.88■□□□□ 0.29
SHKBP1-202ENST00000593764 PRAMEF25A6NGN4 478 aa16.88■□□□□ 0.29
SHKBP1-202ENST00000593764 GNB5O14775 395 aa16.88■□□□□ 0.29
SHKBP1-202ENST00000593764 SNPHO15079 494 aa16.88■□□□□ 0.29
SHKBP1-202ENST00000593764 BGNP21810 368 aa16.88■□□□□ 0.29
SHKBP1-202ENST00000593764 ACVR2AP27037 513 aa16.88■□□□□ 0.29
SHKBP1-202ENST00000593764 PNLIPRP2P54317 469 aa16.88■□□□□ 0.29
SHKBP1-202ENST00000593764 PSPHP78330 225 aa16.88■□□□□ 0.29
SHKBP1-202ENST00000593764 ZNF155Q12901 538 aaPredicted RBP16.88■□□□□ 0.29
SHKBP1-202ENST00000593764 GAB1Q13480 694 aa16.88■□□□□ 0.29
SHKBP1-202ENST00000593764 IL23RQ5VWK5 629 aa16.88■□□□□ 0.29
SHKBP1-202ENST00000593764 TMEM211Q6ICI0 200 aa16.88■□□□□ 0.29
SHKBP1-202ENST00000593764 ZNF585AQ6P3V2 769 aa16.88■□□□□ 0.29
SHKBP1-202ENST00000593764 ANGPTL8Q6UXH0 198 aa16.88■□□□□ 0.29
SHKBP1-202ENST00000593764 LARP4Q71RC2 724 aaKnown RBP eCLIP16.88■□□□□ 0.29
SHKBP1-202ENST00000593764 WDSUB1Q8N9V3 476 aa16.88■□□□□ 0.29
SHKBP1-202ENST00000593764 OR1J4Q8NGS1 313 aa16.88■□□□□ 0.29
SHKBP1-202ENST00000593764 NUDT8Q8WV74 236 aa16.88■□□□□ 0.29
SHKBP1-202ENST00000593764 HOXB13Q92826 284 aaPredicted RBP16.88■□□□□ 0.29
SHKBP1-202ENST00000593764 TMCO6Q96DC7 493 aa16.88■□□□□ 0.29
SHKBP1-202ENST00000593764 ZBED6CLQ96FA7 236 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms