RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 KIAA0930Q6ICG6 404 aaPredicted RBP4.42□□□□□ -1.7
ZNF540-204ENST00000586792 HMBOX1Q6NT76 420 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 TTC27Q6P3X3 843 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 LRIG3Q6UXM1 1119 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 C18orf65Q6ZTR6 163 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 TUBA1AQ71U36 451 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 PRSS42Q7Z5A4 293 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 ARHGAP22Q7Z5H3 698 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 AMIGO1Q86WK6 493 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 ZFAND4Q86XD8 727 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 PPP1R3BQ86XI6 285 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 CNTN4Q8IWV2 1026 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 KLHL7Q8IXQ5 586 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 PIANPQ8IYJ0 282 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 PDIK1LQ8N165 341 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 OR4E2Q8NGC2 313 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 OR52E1Q8NGJ3 308 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 OR13J1Q8NGT2 312 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 CFAP61Q8NHU2 1237 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 POC1BQ8TC44 478 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 DUSP19Q8WTR2 217 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 NAT14Q8WUY8 206 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 SPACA9Q96E40 222 aaPredicted RBP4.42□□□□□ -1.7
ZNF540-204ENST00000586792 ELMO2Q96JJ3 720 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 SERPINB12Q96P63 405 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 DMRTA2Q96SC8 542 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 CCDC77Q9BR77 488 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 ERP44Q9BS26 406 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 NAT9Q9BTE0 207 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 SLC25A23Q9BV35 468 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 CARD6Q9BX69 1037 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 RAB11FIP5Q9BXF6 653 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 DDX47Q9H0S4 455 aaKnown RBP4.42□□□□□ -1.7
ZNF540-204ENST00000586792 OR52A5Q9H2C5 316 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 CENPHQ9H3R5 247 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 GPN2Q9H9Y4 310 aaPredicted RBP4.42□□□□□ -1.7
ZNF540-204ENST00000586792 PPANQ9NQ55 473 aaKnown RBP4.42□□□□□ -1.7
ZNF540-204ENST00000586792 RPRD1BQ9NQG5 326 aaKnown RBP4.42□□□□□ -1.7
ZNF540-204ENST00000586792 FBXO8Q9NRD0 319 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 FAM114A2Q9NRY5 505 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 C20orf96Q9NUD7 363 aaPredicted RBP4.42□□□□□ -1.7
ZNF540-204ENST00000586792 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.42□□□□□ -1.7
ZNF540-204ENST00000586792 OCIAD1Q9NX40 245 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 RNF14Q9UBS8 474 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 EPHA6Q9UF33 1036 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 SLC2A6Q9UGQ3 507 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 SLC24A2Q9UI40 661 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 LNPEPQ9UIQ6 1025 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 KCND3Q9UK17 655 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 RARRES3Q9UL19 164 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 ICKQ9UPZ9 632 aa4.42□□□□□ -1.7
ZNF540-204ENST00000586792 CNOT1A5YKK6 2376 aaKnown RBP4.42□□□□□ -1.7
ZNF540-204ENST00000586792 ASPMQ8IZT6 3477 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 WDFY3Q8IZQ1 3526 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 CABIN1Q9Y6J0 2220 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 FAM237BA0A1B0GVD1 139 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 A0A1W2PNU3 283 aaPredicted RBP4.41□□□□□ -1.7
ZNF540-204ENST00000586792 TCRBV7S3A2A0A539 114 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 XKRY2A2RUG3 117 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 USP27XA6NNY8 438 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 GOLGA8KD6RF30 607 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 E9PBE3 544 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 GOLGA8TH3BQL2 631 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 DNALI1O14645 258 aaPredicted RBP4.41□□□□□ -1.7
ZNF540-204ENST00000586792 PCDH17O14917 1159 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 TTI1O43156 1089 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 OR1I1O60431 355 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 AVILO75366 819 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 ZNF254O75437 659 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 SCRG1O75711 98 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 STK17BO94768 372 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 TTC4O95801 387 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 KLK3P07288 261 aaPredicted RBP4.41□□□□□ -1.7
ZNF540-204ENST00000586792 NCF1P14598 390 aaPredicted RBP4.41□□□□□ -1.7
ZNF540-204ENST00000586792 NELFEP18615 380 aaKnown RBP4.41□□□□□ -1.7
ZNF540-204ENST00000586792 PGAM1P18669 254 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 CYP2A7P20853 494 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 PCSK6P29122 969 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 PDHA2P29803 388 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 FMO4P31512 558 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 CA5AP35218 305 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 SOAT1P35610 550 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 MAGEA6P43360 314 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 SLC15A1P46059 708 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 PITPNBP48739 271 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 BLVRAP53004 296 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 SNU13P55769 128 aaKnown RBP4.41□□□□□ -1.7
ZNF540-204ENST00000586792 TRA2BP62995 288 aaKnown RBP4.41□□□□□ -1.7
ZNF540-204ENST00000586792 CKAP4Q07065 602 aaKnown RBP4.41□□□□□ -1.7
ZNF540-204ENST00000586792 DOC2AQ14183 400 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 SLC29A2Q14542 456 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 RBMS2Q15434 407 aaKnown RBP4.41□□□□□ -1.7
ZNF540-204ENST00000586792 TGIF1Q15583 401 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 KCTD21Q4G0X4 260 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 SPANXN3Q5MJ09 141 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 SH2D4BQ5SQS7 431 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 METTL11BQ5VVY1 283 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 CAPRIN2Q6IMN6 1127 aaKnown RBP4.41□□□□□ -1.7
ZNF540-204ENST00000586792 LRRC8EQ6NSJ5 796 aa4.41□□□□□ -1.7
ZNF540-204ENST00000586792 UGT3A1Q6NUS8 523 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms