RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 MMP2P08253 660 aa16.37■□□□□ 0.21
PTPN21-208ENST00000556564 CPMP14384 443 aa16.37■□□□□ 0.21
PTPN21-208ENST00000556564 OR3A3P47888 321 aa16.37■□□□□ 0.21
PTPN21-208ENST00000556564 OR3A2P47893 321 aa16.37■□□□□ 0.21
PTPN21-208ENST00000556564 SYNPOQ8N3V7 929 aa16.37■□□□□ 0.21
PTPN21-208ENST00000556564 INTS6Q9UL03 887 aaKnown RBP16.37■□□□□ 0.21
PTPN21-208ENST00000556564 FRS3O43559 492 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 SLC15A1P46059 708 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 TLE3Q04726 772 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 GAS6Q14393 721 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 KCNAB1Q14722 419 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 SLC37A2Q8TED4 501 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 MKRN2Q9H000 416 aaKnown RBP16.36■□□□□ 0.21
PTPN21-208ENST00000556564 TIMMDC1Q9NPL8 285 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 FGF21Q9NSA1 209 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 VNN3Q9NY84 501 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 EIF3KQ9UBQ5 218 aaKnown RBP16.36■□□□□ 0.21
PTPN21-208ENST00000556564 SMIM30A4D0T7 59 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 ANTXRLA6NF34 631 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 GGT1P19440 569 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 DSG2Q14126 1118 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 LIX1LQ8IVB5 337 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 TM9SF4Q92544 642 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 HTRA1Q92743 480 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 CBLCQ9ULV8 474 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 GOLGA4Q13439 2230 aaKnown RBP16.36■□□□□ 0.21
PTPN21-208ENST00000556564 HTR3EA5X5Y0 456 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 H3BNX3 289 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 MT-ND5P03915 603 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 HMGN2P05204 90 aaKnown RBP16.36■□□□□ 0.21
PTPN21-208ENST00000556564 CAPN3P20807 821 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 RAB38P57729 211 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 DMPKQ09013 629 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 BCL7AQ4VC05 210 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 PRAMEF8Q5VWM4 474 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 PRAMEF7Q5VXH5 474 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 RPL13AP3Q6NVV1 102 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 PDLIM5Q96HC4 596 aaKnown RBP16.36■□□□□ 0.21
PTPN21-208ENST00000556564 GPN1Q9HCN4 374 aaPredicted RBP16.36■□□□□ 0.21
PTPN21-208ENST00000556564 SLAMF7Q9NQ25 335 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 DIABLOQ9NR28 239 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 TCN2P20062 427 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 LHCGRP22888 699 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 SLC5A2P31639 672 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 CDKL1Q00532 357 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 CLCA4Q14CN2 919 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 METTL2BQ6P1Q9 378 aaKnown RBP16.36■□□□□ 0.21
PTPN21-208ENST00000556564 NRMQ8IXM6 262 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 ARMC10Q8N2F6 343 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 PITX2Q99697 317 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 RPP25Q9BUL9 199 aaKnown RBP16.36■□□□□ 0.21
PTPN21-208ENST00000556564 BTNL2Q9UIR0 455 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 FCER2P06734 321 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 SOX2P48431 317 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 AP3S2P59780 193 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 AFMIDQ63HM1 303 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 IL17RCQ8NAC3 791 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 PGAM5Q96HS1 289 aa16.36■□□□□ 0.21
PTPN21-208ENST00000556564 FAM240BA0A1B0GVZ2 78 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 FESP07332 822 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 GLULP15104 373 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 VBP1P61758 197 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 GRIK2Q13002 908 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 OR7A5Q15622 319 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 CCSMST1Q4G0I0 132 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 HMBOX1Q6NT76 420 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 LINC00696Q6ZRV3 163 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 IQCF2Q8IXL9 164 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 PLPP6Q8IY26 295 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 PATE1Q8WXA2 126 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 ITPAQ9BY32 194 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 EURLQ9NYK6 297 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 TBC1D29Q9UFV1 150 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 WRBO00258 174 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 ZNF749O43361 778 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 ABOP16442 354 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 MAP4K2Q12851 820 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 TMEM196Q5HYL7 178 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 SLC45A3Q96JT2 553 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 TRAPPC13A5PLN9 417 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 TLCD2A6NGC4 264 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 CD46P15529 392 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 ZER1Q7Z7L7 766 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 ALDH16A1Q8IZ83 802 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 OR4K13Q8NH42 304 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 KLHL21Q9UJP4 597 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 CTXN1P60606 82 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 FBXO42Q6P3S6 717 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 ZNF227Q86WZ6 799 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 C3orf30Q96M34 536 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 SORT1Q99523 831 aa16.35■□□□□ 0.21
PTPN21-208ENST00000556564 BARD1Q99728 777 aaKnown RBP16.35■□□□□ 0.21
PTPN21-208ENST00000556564 FABP12A6NFH5 140 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 IL9P15248 144 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 ELK4P28324 431 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 ADAM8P78325 824 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 ABCA11PQ4W5N1 156 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 CNIH3Q8TBE1 160 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 FRMD6Q96NE9 622 aa16.34■□□□□ 0.21
PTPN21-208ENST00000556564 OR7D2Q96RA2 312 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms