RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ANXA4P09525 319 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-213ENST00000550629 RAB40ALP0C0E4 278 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 FAM58BPP0C7Q3 252 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 KITP10721 976 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 PRPS2P11908 318 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 BCKDHAP12694 445 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 DDX5P17844 614 aaKnown RBP5.38□□□□□ -1.55
SCAF11-213ENST00000550629 LBPP18428 481 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 IL1RNP18510 177 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 ITGAXP20702 1163 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 PRPS1L1P21108 318 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 DRD4P21917 467 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 FBLP22087 321 aaKnown RBP5.38□□□□□ -1.55
SCAF11-213ENST00000550629 JAK1P23458 1154 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 EPHA3P29320 983 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 PPP2R1BP30154 601 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 TLX1P31314 330 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-213ENST00000550629 TIA1P31483 386 aaKnown RBP eCLIP5.38□□□□□ -1.55
SCAF11-213ENST00000550629 SLC5A2P31639 672 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 RPL3P39023 403 aaKnown RBP5.38□□□□□ -1.55
SCAF11-213ENST00000550629 MRPL19P49406 292 aaKnown RBP5.38□□□□□ -1.55
SCAF11-213ENST00000550629 HSD17B7P56937 341 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 RAB8AP61006 207 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 ZNF763Q0D2J5 394 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 SLAMF1Q13291 335 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 HEPACAMQ14CZ8 416 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 GSTA3Q16772 222 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 TBC1D25Q3MII6 688 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 RFTN2Q52LD8 501 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-213ENST00000550629 CYP20A1Q6UW02 462 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 SCIMPQ6UWF3 145 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 ZNF793Q6ZN11 406 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 SPATA21Q7Z572 469 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 CPLX4Q7Z7G2 160 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 GPR180Q86V85 440 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 ZNF595Q8IYB9 648 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 RNF175Q8N4F7 328 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 C1orf52Q8N6N3 182 aaKnown RBP5.38□□□□□ -1.55
SCAF11-213ENST00000550629 FNDC5Q8NAU1 212 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 SLC38A9Q8NBW4 561 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 ZCCHC10Q8TBK6 192 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 TBC1D20Q96BZ9 403 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 MTERF3Q96E29 417 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 MMABQ96EY8 250 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-213ENST00000550629 APIPQ96GX9 242 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 MRGPRX4Q96LA9 322 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 C3orf30Q96M34 536 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 Q96MF0 132 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 SCNM1Q9BWG6 230 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 FAIM2Q9BWQ8 316 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 RABEP2Q9H5N1 569 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 WDR55Q9H6Y2 383 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-213ENST00000550629 WDR41Q9HAD4 459 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 MYNNQ9NPC7 610 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 TCF7L2Q9NQB0 619 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 TAS2R7Q9NYW3 318 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 EHD3Q9NZN3 535 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 FOXJ2Q9P0K8 574 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 DHCR7Q9UBM7 475 aaKnown RBP5.38□□□□□ -1.55
SCAF11-213ENST00000550629 TRPC4Q9UBN4 977 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 ZNF282Q9UDV7 671 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-213ENST00000550629 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-213ENST00000550629 KLK13Q9UKR3 277 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 DAPP1Q9UN19 280 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 EIF3LQ9Y262 564 aaKnown RBP5.38□□□□□ -1.55
SCAF11-213ENST00000550629 MRPS33Q9Y291 106 aaKnown RBP5.38□□□□□ -1.55
SCAF11-213ENST00000550629 ASB4Q9Y574 426 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 PTGDR2Q9Y5Y4 395 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 UNC13CQ8NB66 2214 aa5.38□□□□□ -1.55
SCAF11-213ENST00000550629 PCM1Q15154 2024 aa5.37□□□□□ -1.55
SCAF11-213ENST00000550629 A0A0G2JND7 137 aa5.37□□□□□ -1.55
SCAF11-213ENST00000550629 C1orf226A1L170 272 aa5.37□□□□□ -1.55
SCAF11-213ENST00000550629 VSTM2BA6NLU5 285 aa5.37□□□□□ -1.55
SCAF11-213ENST00000550629 SGK494L7N484 410 aa5.37□□□□□ -1.55
SCAF11-213ENST00000550629 PSMD12O00232 456 aaPredicted RBP5.37□□□□□ -1.55
SCAF11-213ENST00000550629 RTCAO00442 366 aaKnown RBP5.37□□□□□ -1.55
SCAF11-213ENST00000550629 CLDN4O14493 209 aa5.37□□□□□ -1.55
SCAF11-213ENST00000550629 UBDO15205 165 aa5.37□□□□□ -1.55
SCAF11-213ENST00000550629 SLC22A2O15244 555 aa5.37□□□□□ -1.55
SCAF11-213ENST00000550629 PROM1O43490 865 aa5.37□□□□□ -1.55
SCAF11-213ENST00000550629 CHST10O43529 356 aa5.37□□□□□ -1.55
SCAF11-213ENST00000550629 TMPRSS11DO60235 418 aa5.37□□□□□ -1.55
SCAF11-213ENST00000550629 SNX3O60493 162 aa5.37□□□□□ -1.55
SCAF11-213ENST00000550629 TBX19O60806 448 aa5.37□□□□□ -1.55
SCAF11-213ENST00000550629 RDH16O75452 317 aa5.37□□□□□ -1.55
SCAF11-213ENST00000550629 ERN1O75460 977 aaKnown RBP5.37□□□□□ -1.55
SCAF11-213ENST00000550629 STATHP02808 62 aa5.37□□□□□ -1.55
SCAF11-213ENST00000550629 FHP07954 510 aa5.37□□□□□ -1.55
SCAF11-213ENST00000550629 NR2F6P10588 404 aa5.37□□□□□ -1.55
SCAF11-213ENST00000550629 LIPCP11150 499 aa5.37□□□□□ -1.55
SCAF11-213ENST00000550629 SDC1P18827 310 aa5.37□□□□□ -1.55
SCAF11-213ENST00000550629 CERS1P27544 350 aa5.37□□□□□ -1.55
SCAF11-213ENST00000550629 HPCAL1P37235 193 aa5.37□□□□□ -1.55
SCAF11-213ENST00000550629 XCR1P46094 333 aa5.37□□□□□ -1.55
SCAF11-213ENST00000550629 ATP4BP51164 291 aa5.37□□□□□ -1.55
SCAF11-213ENST00000550629 ARFIP2P53365 341 aa5.37□□□□□ -1.55
SCAF11-213ENST00000550629 LIM2P55344 173 aa5.37□□□□□ -1.55
SCAF11-213ENST00000550629 RAB38P57729 211 aa5.37□□□□□ -1.55
SCAF11-213ENST00000550629 RPL38P63173 70 aaKnown RBP5.37□□□□□ -1.55
SCAF11-213ENST00000550629 RAE1P78406 368 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms