RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 ACSL1P33121 698 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 CLCNKAP51800 687 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 RAB14P61106 215 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 SHC2P98077 582 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 EXOSC2Q13868 293 aaKnown RBP16.57■□□□□ 0.24
RAB40C-205ENST00000539661 POU4F3Q15319 338 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 FAM122CQ6P4D5 195 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 C22orf39Q6P5X5 142 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 NXPE4Q6UWF7 544 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 TMEM91Q6ZNR0 172 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 CDH24Q86UP0 819 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 GALNT11Q8NCW6 608 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 FIBINQ8TAL6 211 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 ERVMER34-1Q9H9K5 563 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 NUDT15Q9NV35 164 aa16.57■□□□□ 0.24
RAB40C-205ENST00000539661 CD8B2A6NJW9 211 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 RGS9O75916 674 aaPredicted RBP16.56■□□□□ 0.24
RAB40C-205ENST00000539661 TSPAN9O75954 239 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 C1orf105O95561 183 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 POP4O95707 220 aaKnown RBP16.56■□□□□ 0.24
RAB40C-205ENST00000539661 CD8BP10966 210 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 SOX9P48436 509 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 GALEQ14376 348 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 SPDYE7PQ495Y7 208 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 IDNKQ5T6J7 187 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 SHFQ7M4L6 423 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 SLC5A11Q8WWX8 675 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 SMPDL3AQ92484 453 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 SCAMP4Q969E2 229 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 NXPE2Q96DL1 559 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 ZNF649Q9BS31 505 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 SPATA5L1Q9BVQ7 753 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 EGLN3Q9H6Z9 239 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 SLAMF7Q9NQ25 335 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 C12orf4Q9NQ89 552 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 NFKBIL1Q9UBC1 381 aaPredicted RBP16.56■□□□□ 0.24
RAB40C-205ENST00000539661 SH2B3Q9UQQ2 575 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 GPR52Q9Y2T5 361 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 C2orf92A0A1B0GVN3 265 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 CARNS1A5YM72 827 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 M0R3H8 397 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 NPR2P20594 1047 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 CD70P32970 193 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 PRLHRP49683 370 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 RNF144AP50876 292 aaPredicted RBP16.56■□□□□ 0.24
RAB40C-205ENST00000539661 CCL23P55773 120 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 RPA4Q13156 261 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 FGFBP1Q14512 234 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 VASNQ6EMK4 673 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 PYHIN1Q6K0P9 492 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 BRAT1Q6PJG6 821 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 SLC9B2Q86UD5 537 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 GPAT4Q86UL3 456 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 MMP21Q8N119 569 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 NR4A3Q92570 626 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 TMEM175Q9BSA9 504 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 DPCDQ9BVM2 203 aaPredicted RBP16.56■□□□□ 0.24
RAB40C-205ENST00000539661 ZDHHC6Q9H6R6 413 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 ZNF224Q9NZL3 707 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 HS3ST2Q9Y278 367 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 BACE2Q9Y5Z0 518 aa16.56■□□□□ 0.24
RAB40C-205ENST00000539661 PLXNA2O75051 1894 aa16.55■□□□□ 0.24
RAB40C-205ENST00000539661 MEIKINA0A087WXM9 373 aa16.55■□□□□ 0.24
RAB40C-205ENST00000539661 TEX13CA0A0J9YWL9 993 aa16.55■□□□□ 0.24
RAB40C-205ENST00000539661 CIB4A0PJX0 185 aa16.55■□□□□ 0.24
RAB40C-205ENST00000539661 TCRBP04435 133 aa16.55■□□□□ 0.24
RAB40C-205ENST00000539661 TFPIP10646 304 aa16.55■□□□□ 0.24
RAB40C-205ENST00000539661 FRKP42685 505 aaPredicted RBP16.55■□□□□ 0.24
RAB40C-205ENST00000539661 SRP54P61011 504 aaKnown RBP16.55■□□□□ 0.24
RAB40C-205ENST00000539661 TSPAN31Q12999 210 aa16.55■□□□□ 0.24
RAB40C-205ENST00000539661 ZNF267Q14586 743 aaPredicted RBP16.55■□□□□ 0.24
RAB40C-205ENST00000539661 LGALSLQ3ZCW2 172 aaPredicted RBP16.55■□□□□ 0.24
RAB40C-205ENST00000539661 AADACL4Q5VUY2 407 aa16.55■□□□□ 0.24
RAB40C-205ENST00000539661 RASSF6Q6ZTQ3 369 aa16.55■□□□□ 0.24
RAB40C-205ENST00000539661 PRSS42Q7Z5A4 293 aa16.55■□□□□ 0.24
RAB40C-205ENST00000539661 SPRYD4Q8WW59 207 aaPredicted RBP16.55■□□□□ 0.24
RAB40C-205ENST00000539661 ADAMTS14Q8WXS8 1223 aa16.55■□□□□ 0.24
RAB40C-205ENST00000539661 SECISBP2Q96T21 854 aaKnown RBP16.55■□□□□ 0.24
RAB40C-205ENST00000539661 PPA2Q9H2U2 334 aa16.55■□□□□ 0.24
RAB40C-205ENST00000539661 SIRT3Q9NTG7 399 aaPredicted RBP16.55■□□□□ 0.24
RAB40C-205ENST00000539661 MED17Q9NVC6 651 aa16.55■□□□□ 0.24
RAB40C-205ENST00000539661 EVA1BQ9NVM1 165 aa16.55■□□□□ 0.24
RAB40C-205ENST00000539661 LYARQ9NX58 379 aaKnown RBP16.55■□□□□ 0.24
RAB40C-205ENST00000539661 MARK1Q9P0L2 795 aa16.55■□□□□ 0.24
RAB40C-205ENST00000539661 REV3LO60673 3130 aa16.55■□□□□ 0.24
RAB40C-205ENST00000539661 TRAV6A0A075B6T7 132 aa16.55■□□□□ 0.24
RAB40C-205ENST00000539661 FAM170BA6NMN3 283 aa16.55■□□□□ 0.24
RAB40C-205ENST00000539661 PRRG1O14668 218 aa16.55■□□□□ 0.24
RAB40C-205ENST00000539661 GALTP07902 379 aa16.55■□□□□ 0.24
RAB40C-205ENST00000539661 PPP2R1BP30154 601 aa16.55■□□□□ 0.24
RAB40C-205ENST00000539661 WEE1P30291 646 aa16.55■□□□□ 0.24
RAB40C-205ENST00000539661 CAMK2DQ13557 499 aa16.55■□□□□ 0.24
RAB40C-205ENST00000539661 C16orf62Q7Z3J2 963 aa16.55■□□□□ 0.24
RAB40C-205ENST00000539661 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.55■□□□□ 0.24
RAB40C-205ENST00000539661 TEX12Q9BXU0 123 aa16.55■□□□□ 0.24
RAB40C-205ENST00000539661 ZNF624Q9P2J8 865 aaPredicted RBP16.55■□□□□ 0.24
RAB40C-205ENST00000539661 SCP2D1Q9UJQ7 156 aa16.55■□□□□ 0.24
RAB40C-205ENST00000539661 BNIP3LO60238 219 aa16.54■□□□□ 0.24
RAB40C-205ENST00000539661 B4GALT2O60909 372 aa16.54■□□□□ 0.24
RAB40C-205ENST00000539661 SULT1A3P0DMM9 295 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms