RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 SRRM5B3KS81 715 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 ZNF814B7Z6K7 855 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 KLF11O14901 512 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 PPIHO43447 177 aaKnown RBP5.67□□□□□ -1.5
HDAC3-206ENST00000471968 ZFPL1O95159 310 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 FGFR1OPO95684 399 aaKnown RBP5.67□□□□□ -1.5
HDAC3-206ENST00000471968 PROCP04070 461 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 MYZAPP0CAP1 466 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 SMIM10L1P0DMW3 83 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 KRT15P19012 456 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 LMO1P25800 156 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 BUD31P41223 144 aaPredicted RBP5.67□□□□□ -1.5
HDAC3-206ENST00000471968 MTIF2P46199 727 aaKnown RBP5.67□□□□□ -1.5
HDAC3-206ENST00000471968 NPY2RP49146 381 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 ATP4BP51164 291 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 DUSP2Q05923 314 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 WASHC5Q12768 1159 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 SLAMF1Q13291 335 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 DCTN2Q13561 401 aaKnown RBP5.67□□□□□ -1.5
HDAC3-206ENST00000471968 NFYCQ13952 458 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 SERTAD2Q14140 314 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 MORF4L2Q15014 288 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 TMEM201Q5SNT2 666 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 NPNTQ6UXI9 565 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 DGAT2L6Q6ZPD8 337 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 Q6ZTK2 550 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 PID1Q7Z2X4 250 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 P2RY8Q86VZ1 359 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 C17orf64Q86WR6 236 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 TDRPQ86YL5 185 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 WDFY1Q8IWB7 410 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 PLD5Q8N7P1 536 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 OR4S1Q8NGB4 309 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 SMARCE1Q969G3 411 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 ZDHHC16Q969W1 377 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 PPWD1Q96BP3 646 aaKnown RBP5.67□□□□□ -1.5
HDAC3-206ENST00000471968 SMIM10Q96HG1 83 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 TRIM54Q9BYV2 358 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 CENPHQ9H3R5 247 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 PLK3Q9H4B4 646 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 ANKZF1Q9H8Y5 726 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 CCDC177Q9NQR7 707 aaPredicted RBP5.67□□□□□ -1.5
HDAC3-206ENST00000471968 FAM114A2Q9NRY5 505 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 RYDENQ9NUL5 291 aaKnown RBP5.67□□□□□ -1.5
HDAC3-206ENST00000471968 ASIC3Q9UHC3 531 aa5.67□□□□□ -1.5
HDAC3-206ENST00000471968 MCTS1Q9ULC4 181 aaKnown RBP5.67□□□□□ -1.5
HDAC3-206ENST00000471968 C2orf92A0A1B0GVN3 265 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 SH3PXD2BA1X283 911 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 CTAGE15A4D2H0 777 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 CYR61O00622 381 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 EIF1AYO14602 144 aaKnown RBP5.66□□□□□ -1.5
HDAC3-206ENST00000471968 TRAF3IP2O43734 574 aaPredicted RBP5.66□□□□□ -1.5
HDAC3-206ENST00000471968 CLEC3AO75596 197 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 SMC2O95347 1197 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 CATP04040 527 aaKnown RBP5.66□□□□□ -1.5
HDAC3-206ENST00000471968 ABCB1P08183 1280 aaPredicted RBP5.66□□□□□ -1.5
HDAC3-206ENST00000471968 OR4A8P0C604 315 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 MTHFD2P13995 350 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 CNTFP26441 200 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 PPP1R2P41236 205 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 RFX3P48380 749 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 NRG3P56975 720 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 TBPL1P62380 186 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 HERVK_113P63132 956 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 ERVK-8P63133 956 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 RABEP1Q15276 862 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 ADRM1Q16186 407 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 PTRHD1Q6GMV3 140 aaKnown RBP5.66□□□□□ -1.5
HDAC3-206ENST00000471968 VHLLQ6RSH7 139 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 RANBP10Q6VN20 620 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 ZNF620Q6ZNG0 422 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 LHFPL2Q6ZUX7 228 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 CTAGE6Q86UF2 777 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 LYG1Q8N1E2 194 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 RIBC1Q8N443 379 aaPredicted RBP5.66□□□□□ -1.5
HDAC3-206ENST00000471968 CEP112Q8N8E3 955 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 OR52B6Q8NGF0 335 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 FAM110BQ8TC76 370 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 FBXL20Q96IG2 436 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 OLFM3Q96PB7 478 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 TTC1Q99614 292 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 AGPAT1Q99943 283 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 MCMBPQ9BTE3 642 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 ERVK-6Q9BXR3 956 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 TPK1Q9H3S4 243 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 GOLPH3LQ9H4A5 285 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 CNTD2Q9H8S5 307 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 ZFP69BQ9UJL9 534 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 ADAM29Q9UKF5 820 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 ERVK-19Q9WJR5 959 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 MRPS18CQ9Y3D5 142 aaKnown RBP5.66□□□□□ -1.5
HDAC3-206ENST00000471968 SLC25A15Q9Y619 301 aa5.66□□□□□ -1.5
HDAC3-206ENST00000471968 DMBT1Q9UGM3 2413 aaPredicted RBP5.65□□□□□ -1.5
HDAC3-206ENST00000471968 FAM237AA0A1B0GTK4 181 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 CCDC162PA2VCL2 907 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 PRAMEF25A6NGN4 478 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 B3GALT2O43825 422 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 PSIP1O75475 530 aaKnown RBP5.65□□□□□ -1.5
HDAC3-206ENST00000471968 RAD51DO75771 328 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 PGM3O95394 542 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms