RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 PFDN4Q9NQP4 134 aa20.69■□□□□ 0.9
USP42-205ENST00000465073 HEY2Q9UBP5 337 aa20.69■□□□□ 0.9
USP42-205ENST00000465073 MCM8Q9UJA3 840 aa20.69■□□□□ 0.9
USP42-205ENST00000465073 ZNF225Q9UK10 706 aa20.69■□□□□ 0.9
USP42-205ENST00000465073 MRPS18CQ9Y3D5 142 aaKnown RBP20.69■□□□□ 0.9
USP42-205ENST00000465073 FLNAP21333 2647 aaKnown RBP20.68■□□□□ 0.9
USP42-205ENST00000465073 TRIM49D1C9J1S8 452 aa20.68■□□□□ 0.9
USP42-205ENST00000465073 MANBAO00462 879 aa20.68■□□□□ 0.9
USP42-205ENST00000465073 OR4F21O95013 312 aa20.68■□□□□ 0.9
USP42-205ENST00000465073 KRT6AP02538 564 aa20.68■□□□□ 0.9
USP42-205ENST00000465073 KRT6BP04259 564 aa20.68■□□□□ 0.9
USP42-205ENST00000465073 SBK3P0C264 359 aa20.68■□□□□ 0.9
USP42-205ENST00000465073 CPA2P48052 419 aa20.68■□□□□ 0.9
USP42-205ENST00000465073 KRT6CP48668 564 aa20.68■□□□□ 0.9
USP42-205ENST00000465073 CLCQ05315 142 aa20.68■□□□□ 0.9
USP42-205ENST00000465073 ZNF628Q5EBL2 1059 aa20.68■□□□□ 0.9
USP42-205ENST00000465073 CCDC116Q8IYX3 515 aa20.68■□□□□ 0.9
USP42-205ENST00000465073 DCAKDQ8WVC6 231 aa20.68■□□□□ 0.9
USP42-205ENST00000465073 INTS12Q96CB8 462 aaKnown RBP20.68■□□□□ 0.9
USP42-205ENST00000465073 HBEGFQ99075 208 aa20.68■□□□□ 0.9
USP42-205ENST00000465073 GALNT8Q9NY28 637 aa20.68■□□□□ 0.9
USP42-205ENST00000465073 RPH3AQ9Y2J0 694 aaPredicted RBP20.68■□□□□ 0.9
USP42-205ENST00000465073 WIF1Q9Y5W5 379 aa20.68■□□□□ 0.9
USP42-205ENST00000465073 POC1B-GALNT4F8VUJ3 575 aa20.67■□□□□ 0.9
USP42-205ENST00000465073 CT45A8P0DMV1 189 aa20.67■□□□□ 0.9
USP42-205ENST00000465073 CT45A9P0DMV2 189 aa20.67■□□□□ 0.9
USP42-205ENST00000465073 LHX2P50458 406 aa20.67■□□□□ 0.9
USP42-205ENST00000465073 CSTF3Q12996 717 aaKnown RBP20.67■□□□□ 0.9
USP42-205ENST00000465073 EFR3AQ14156 821 aa20.67■□□□□ 0.9
USP42-205ENST00000465073 RASA2Q15283 850 aa20.67■□□□□ 0.9
USP42-205ENST00000465073 ERCC6LQ2NKX8 1250 aa20.67■□□□□ 0.9
USP42-205ENST00000465073 CT45A2Q5DJT8 189 aa20.67■□□□□ 0.9
USP42-205ENST00000465073 LUZP2Q86TE4 346 aa20.67■□□□□ 0.9
USP42-205ENST00000465073 CDYL2Q8N8U2 506 aa20.67■□□□□ 0.9
USP42-205ENST00000465073 ADOQ96SZ5 270 aa20.67■□□□□ 0.9
USP42-205ENST00000465073 G6PC3Q9BUM1 346 aa20.67■□□□□ 0.9
USP42-205ENST00000465073 CLCF1Q9UBD9 225 aa20.67■□□□□ 0.9
USP42-205ENST00000465073 DLGAP4Q9Y2H0 992 aa20.67■□□□□ 0.9
USP42-205ENST00000465073 SH3D21A4FU49 640 aa20.66■□□□□ 0.9
USP42-205ENST00000465073 TSPAN2O60636 221 aa20.66■□□□□ 0.9
USP42-205ENST00000465073 HRGP04196 525 aa20.66■□□□□ 0.9
USP42-205ENST00000465073 KRT20P35900 424 aa20.66■□□□□ 0.9
USP42-205ENST00000465073 STARP49675 285 aa20.66■□□□□ 0.9
USP42-205ENST00000465073 DIO3P55073 304 aa20.66■□□□□ 0.9
USP42-205ENST00000465073 TEX35Q5T0J7 233 aa20.66■□□□□ 0.9
USP42-205ENST00000465073 GBP7Q8N8V2 638 aaPredicted RBP20.66■□□□□ 0.9
USP42-205ENST00000465073 SFXN2Q96NB2 322 aa20.66■□□□□ 0.9
USP42-205ENST00000465073 FMO2Q99518 471 aa20.66■□□□□ 0.9
USP42-205ENST00000465073 GSX1Q9H4S2 264 aaPredicted RBP20.66■□□□□ 0.9
USP42-205ENST00000465073 FBXL2Q9UKC9 423 aa20.66■□□□□ 0.9
USP42-205ENST00000465073 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.66■□□□□ 0.9
USP42-205ENST00000465073 PLOD2O00469 737 aa20.65■□□□□ 0.9
USP42-205ENST00000465073 ULK1O75385 1050 aa20.65■□□□□ 0.9
USP42-205ENST00000465073 IL3P08700 152 aa20.65■□□□□ 0.9
USP42-205ENST00000465073 SNRPAP09012 282 aaKnown RBP20.65■□□□□ 0.9
USP42-205ENST00000465073 TAC1P20366 129 aa20.65■□□□□ 0.9
USP42-205ENST00000465073 CORO7P57737 925 aa20.65■□□□□ 0.9
USP42-205ENST00000465073 LARP4Q71RC2 724 aaKnown RBP eCLIP20.65■□□□□ 0.9
USP42-205ENST00000465073 OR9A2Q8NGT5 310 aa20.65■□□□□ 0.9
USP42-205ENST00000465073 SMPDL3BQ92485 455 aa20.65■□□□□ 0.9
USP42-205ENST00000465073 KAT2AQ92830 837 aa20.65■□□□□ 0.9
USP42-205ENST00000465073 VSTM2LQ96N03 204 aa20.65■□□□□ 0.9
USP42-205ENST00000465073 ZNF382Q96SR6 550 aa20.65■□□□□ 0.9
USP42-205ENST00000465073 ANKRA2Q9H9E1 313 aa20.65■□□□□ 0.9
USP42-205ENST00000465073 NEUROD4Q9HD90 331 aa20.65■□□□□ 0.9
USP42-205ENST00000465073 GIMAP4Q9NUV9 329 aa20.65■□□□□ 0.9
USP42-205ENST00000465073 DKKL1Q9UK85 242 aa20.65■□□□□ 0.9
USP42-205ENST00000465073 GNG14A0A1W2PPG7 69 aa20.64■□□□□ 0.89
USP42-205ENST00000465073 A8MXE2 369 aa20.64■□□□□ 0.89
USP42-205ENST00000465073 CASKO14936 926 aa20.64■□□□□ 0.89
USP42-205ENST00000465073 PCDH7O60245 1069 aa20.64■□□□□ 0.89
USP42-205ENST00000465073 SUPT7LO94864 414 aa20.64■□□□□ 0.89
USP42-205ENST00000465073 ZNF708P17019 499 aa20.64■□□□□ 0.89
USP42-205ENST00000465073 IL12BP29460 328 aa20.64■□□□□ 0.89
USP42-205ENST00000465073 PNLIPRP2P54317 469 aa20.64■□□□□ 0.89
USP42-205ENST00000465073 CLDN18P56856 261 aa20.64■□□□□ 0.89
USP42-205ENST00000465073 MRPS22P82650 360 aaKnown RBP20.64■□□□□ 0.89
USP42-205ENST00000465073 BCL2A1Q16548 175 aa20.64■□□□□ 0.89
USP42-205ENST00000465073 UNC50Q53HI1 259 aa20.64■□□□□ 0.89
USP42-205ENST00000465073 TCHHL1Q5QJ38 904 aaPredicted RBP20.64■□□□□ 0.89
USP42-205ENST00000465073 LGSNQ5TDP6 509 aa20.64■□□□□ 0.89
USP42-205ENST00000465073 GPRIN3Q6ZVF9 776 aa20.64■□□□□ 0.89
USP42-205ENST00000465073 GRAMD2AQ8IUY3 354 aa20.64■□□□□ 0.89
USP42-205ENST00000465073 GCNT2Q8N0V5 402 aa20.64■□□□□ 0.89
USP42-205ENST00000465073 RNF138Q8WVD3 245 aa20.64■□□□□ 0.89
USP42-205ENST00000465073 IFT81Q8WYA0 676 aa20.64■□□□□ 0.89
USP42-205ENST00000465073 EXOSC8Q96B26 276 aaKnown RBP20.64■□□□□ 0.89
USP42-205ENST00000465073 NDRG3Q9UGV2 375 aa20.64■□□□□ 0.89
USP42-205ENST00000465073 PACSIN3Q9UKS6 424 aa20.64■□□□□ 0.89
USP42-205ENST00000465073 NFU1Q9UMS0 254 aa20.64■□□□□ 0.89
USP42-205ENST00000465073 A0A087WUV0 522 aaPredicted RBP20.63■□□□□ 0.89
USP42-205ENST00000465073 ZIC3O60481 467 aa20.63■□□□□ 0.89
USP42-205ENST00000465073 PLOD3O60568 738 aa20.63■□□□□ 0.89
USP42-205ENST00000465073 CHN1P15882 459 aa20.63■□□□□ 0.89
USP42-205ENST00000465073 GRK2P25098 689 aa20.63■□□□□ 0.89
USP42-205ENST00000465073 HOXC12P31275 282 aa20.63■□□□□ 0.89
USP42-205ENST00000465073 RAE1P78406 368 aaKnown RBP20.63■□□□□ 0.89
USP42-205ENST00000465073 HEPACAMQ14CZ8 416 aa20.63■□□□□ 0.89
USP42-205ENST00000465073 SPIN4Q56A73 249 aa20.63■□□□□ 0.89
USP42-205ENST00000465073 ZNF678Q5SXM1 525 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms