RNA–Protein interactions for RNA: ENST00000434243.5

EDEM1-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-202ENST00000434243 BTBD9Q96Q07 612 aa12.14□□□□□ -0.47
EDEM1-202ENST00000434243 STMN4Q9H169 189 aaPredicted RBP12.14□□□□□ -0.47
EDEM1-202ENST00000434243 C12orf65Q9H3J6 166 aaKnown RBP12.14□□□□□ -0.47
EDEM1-202ENST00000434243 RRAGDQ9NQL2 400 aaPredicted RBP12.14□□□□□ -0.47
EDEM1-202ENST00000434243 FIS1Q9Y3D6 152 aa12.14□□□□□ -0.47
EDEM1-202ENST00000434243 L3MBTL1Q9Y468 752 aa12.14□□□□□ -0.47
EDEM1-202ENST00000434243 CELSR2Q9HCU4 2923 aa12.14□□□□□ -0.47
EDEM1-202ENST00000434243 PKDREJQ9NTG1 2253 aa12.14□□□□□ -0.47
EDEM1-202ENST00000434243 EML6Q6ZMW3 1958 aa12.14□□□□□ -0.47
EDEM1-202ENST00000434243 TLDC2A0PJX2 215 aa12.13□□□□□ -0.47
EDEM1-202ENST00000434243 SERTM1A2A2V5 107 aa12.13□□□□□ -0.47
EDEM1-202ENST00000434243 H0Y3Z8 333 aa12.13□□□□□ -0.47
EDEM1-202ENST00000434243 H3BQF6 201 aa12.13□□□□□ -0.47
EDEM1-202ENST00000434243 SYT5O00445 386 aa12.13□□□□□ -0.47
EDEM1-202ENST00000434243 PLOD3O60568 738 aa12.13□□□□□ -0.47
EDEM1-202ENST00000434243 PLIN3O60664 434 aa12.13□□□□□ -0.47
EDEM1-202ENST00000434243 COQ9O75208 318 aa12.13□□□□□ -0.47
EDEM1-202ENST00000434243 NTSP30990 170 aa12.13□□□□□ -0.47
EDEM1-202ENST00000434243 CEACAM8P31997 349 aaPredicted RBP12.13□□□□□ -0.47
EDEM1-202ENST00000434243 CRHR1P34998 444 aa12.13□□□□□ -0.47
EDEM1-202ENST00000434243 ASCL1P50553 236 aa12.13□□□□□ -0.47
EDEM1-202ENST00000434243 DGKQP52824 942 aa12.13□□□□□ -0.47
EDEM1-202ENST00000434243 DNAJB13P59910 316 aa12.13□□□□□ -0.47
EDEM1-202ENST00000434243 ENPP6Q6UWR7 440 aa12.13□□□□□ -0.47
EDEM1-202ENST00000434243 TMEM107Q6UX40 140 aa12.13□□□□□ -0.47
EDEM1-202ENST00000434243 NPSR1Q6W5P4 371 aa12.13□□□□□ -0.47
EDEM1-202ENST00000434243 FRMD7Q6ZUT3 714 aa12.13□□□□□ -0.47
EDEM1-202ENST00000434243 IFNEQ86WN2 208 aa12.13□□□□□ -0.47
EDEM1-202ENST00000434243 TRIM42Q8IWZ5 723 aa12.13□□□□□ -0.47
EDEM1-202ENST00000434243 C4orf33Q8N1A6 199 aa12.13□□□□□ -0.47
EDEM1-202ENST00000434243 WDSUB1Q8N9V3 476 aa12.13□□□□□ -0.47
EDEM1-202ENST00000434243 OR4N2Q8NGD1 307 aa12.13□□□□□ -0.47
EDEM1-202ENST00000434243 DTNBP1Q96EV8 351 aa12.13□□□□□ -0.47
EDEM1-202ENST00000434243 SLC35A4Q96G79 324 aa12.13□□□□□ -0.47
EDEM1-202ENST00000434243 VSTM2LQ96N03 204 aa12.13□□□□□ -0.47
EDEM1-202ENST00000434243 SIRT5Q9NXA8 310 aa12.13□□□□□ -0.47
EDEM1-202ENST00000434243 TAS2R10Q9NYW0 307 aa12.13□□□□□ -0.47
EDEM1-202ENST00000434243 ZNF629Q9UEG4 869 aaPredicted RBP12.13□□□□□ -0.47
EDEM1-202ENST00000434243 DKKL1Q9UK85 242 aa12.13□□□□□ -0.47
EDEM1-202ENST00000434243 RPH3AQ9Y2J0 694 aaPredicted RBP12.13□□□□□ -0.47
EDEM1-202ENST00000434243 WIF1Q9Y5W5 379 aa12.13□□□□□ -0.47
EDEM1-202ENST00000434243 ITPR2Q14571 2701 aa12.13□□□□□ -0.47
EDEM1-202ENST00000434243 MYO9AB2RTY4 2548 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 CD8B2A6NJW9 211 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 MYO1GB0I1T2 1018 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 EEF1E1-BLOC1S5C9J1V9 151 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 EEF1E1O43324 174 aaKnown RBP12.12□□□□□ -0.47
EDEM1-202ENST00000434243 SCO2O43819 266 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 TSPAN2O60636 221 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 SEC22BO75396 215 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 RSL1D1O76021 490 aaKnown RBP12.12□□□□□ -0.47
EDEM1-202ENST00000434243 UROSP10746 265 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 KRT4P19013 534 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 CTSSP25774 331 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 PEX19P40855 299 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 MC3RP41968 323 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 RFX3P48380 749 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 STARP49675 285 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 ZNF136P52737 540 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 PNLIPRP2P54317 469 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 MRPS22P82650 360 aaKnown RBP12.12□□□□□ -0.47
EDEM1-202ENST00000434243 CEBPEQ15744 281 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 PRSS53Q2L4Q9 553 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 LIPMQ5VYY2 423 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 CLEC6AQ6EIG7 209 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 FAM71E1Q6IPT2 247 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 NOXRED1Q6NXP6 359 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 AAGABQ6PD74 315 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 SH2D5Q6ZV89 423 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 TRIM46Q7Z4K8 759 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 EIF1ADQ8N9N8 165 aaKnown RBP12.12□□□□□ -0.47
EDEM1-202ENST00000434243 OR4K17Q8NGC6 315 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 NRGNQ92686 78 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 RNASE6Q93091 150 aaKnown RBP12.12□□□□□ -0.47
EDEM1-202ENST00000434243 GFM2Q969S9 779 aaKnown RBP12.12□□□□□ -0.47
EDEM1-202ENST00000434243 NTNG2Q96CW9 530 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 C11orf24Q96F05 449 aaPredicted RBP12.12□□□□□ -0.47
EDEM1-202ENST00000434243 SFXN2Q96NB2 322 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 POLDIP3Q9BY77 421 aaKnown RBP12.12□□□□□ -0.47
EDEM1-202ENST00000434243 OR2B2Q9GZK3 357 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 IQCGQ9H095 443 aaKnown RBP12.12□□□□□ -0.47
EDEM1-202ENST00000434243 GLIPR2Q9H4G4 154 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 CALHM2Q9HA72 323 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 PPCSQ9HAB8 311 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 MYNNQ9NPC7 610 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 DDX18Q9NVP1 670 aaKnown RBP12.12□□□□□ -0.47
EDEM1-202ENST00000434243 OXSMQ9NWU1 459 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 DNAJB12Q9NXW2 375 aaKnown RBP12.12□□□□□ -0.47
EDEM1-202ENST00000434243 CRIM1Q9NZV1 1036 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 MID2Q9UJV3 735 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 FBXL2Q9UKC9 423 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 CRYBG3Q68DQ2 2970 aa12.12□□□□□ -0.47
EDEM1-202ENST00000434243 CACNA1CQ13936 2221 aa12.11□□□□□ -0.47
EDEM1-202ENST00000434243 MBD3L4A6NDZ8 208 aaPredicted RBP12.11□□□□□ -0.47
EDEM1-202ENST00000434243 MBD3L3A6NE82 208 aaPredicted RBP12.11□□□□□ -0.47
EDEM1-202ENST00000434243 MBD3L5A6NJ08 208 aaPredicted RBP12.11□□□□□ -0.47
EDEM1-202ENST00000434243 SLC28A1O00337 649 aa12.11□□□□□ -0.47
EDEM1-202ENST00000434243 RGS14O43566 566 aa12.11□□□□□ -0.47
EDEM1-202ENST00000434243 TMIGD3P0DMS9 266 aaPredicted RBP12.11□□□□□ -0.47
EDEM1-202ENST00000434243 GRK2P25098 689 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms