RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	ABCD3	P28288	659 aa		7.68	□□□□□ -1.18
NIF3L1-206	ENST00000416651	IL2RG	P31785	369 aa		7.68	□□□□□ -1.18
NIF3L1-206	ENST00000416651	COMP	P49747	757 aa	Predicted RBP	7.68	□□□□□ -1.18
NIF3L1-206	ENST00000416651	ACTG1	P63261	375 aa		7.68	□□□□□ -1.18
NIF3L1-206	ENST00000416651	SQLE	Q14534	574 aa		7.68	□□□□□ -1.18
NIF3L1-206	ENST00000416651	PON3	Q15166	354 aa		7.68	□□□□□ -1.18
NIF3L1-206	ENST00000416651	TAB1	Q15750	504 aa		7.68	□□□□□ -1.18
NIF3L1-206	ENST00000416651	CLEC2A	Q6UVW9	174 aa		7.68	□□□□□ -1.18
NIF3L1-206	ENST00000416651	TMIGD1	Q6UXZ0	262 aa		7.68	□□□□□ -1.18
NIF3L1-206	ENST00000416651	ZNF615	Q8N8J6	731 aa		7.68	□□□□□ -1.18
NIF3L1-206	ENST00000416651	SNX31	Q8N9S9	440 aa		7.68	□□□□□ -1.18
NIF3L1-206	ENST00000416651	FAM168A	Q92567	244 aa		7.68	□□□□□ -1.18
NIF3L1-206	ENST00000416651	ZNF669	Q96BR6	464 aa	Predicted RBP	7.68	□□□□□ -1.18
NIF3L1-206	ENST00000416651	NXNL1	Q96CM4	212 aa		7.68	□□□□□ -1.18
NIF3L1-206	ENST00000416651	MISP3	Q96FF7	219 aa		7.68	□□□□□ -1.18
NIF3L1-206	ENST00000416651	OSBPL11	Q9BXB4	747 aa		7.68	□□□□□ -1.18
NIF3L1-206	ENST00000416651	IL22	Q9GZX6	179 aa		7.68	□□□□□ -1.18
NIF3L1-206	ENST00000416651	EHD1	Q9H4M9	534 aa		7.68	□□□□□ -1.18
NIF3L1-206	ENST00000416651	BFAR	Q9NZS9	450 aa		7.68	□□□□□ -1.18
NIF3L1-206	ENST00000416651	TRMT6	Q9UJA5	497 aa	Known RBP	7.68	□□□□□ -1.18
NIF3L1-206	ENST00000416651	ZNF281	Q9Y2X9	895 aa		7.68	□□□□□ -1.18
NIF3L1-206	ENST00000416651	ZNF337	Q9Y3M9	751 aa		7.68	□□□□□ -1.18
NIF3L1-206	ENST00000416651	TMEM238L	A0A1B0GVL6	79 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	LRP5L	A4QPB2	252 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	VWC2L	B2RUY7	222 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	EIF1AY	O14602	144 aa	Known RBP	7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	OPN1LW	P04000	364 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	SLC25A16	P16260	332 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	HIST1H2AD	P20671	130 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	RPS13	P62277	151 aa	Known RBP	7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	EEF1A1	P68104	462 aa	Known RBP	7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	BASP1	P80723	227 aa	Known RBP	7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	SPOCK1	Q08629	439 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	SP140	Q13342	867 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	DHX34	Q14147	1143 aa	Known RBP	7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	PPP1R3A	Q16821	1122 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	EEF1A1P5	Q5VTE0	462 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	ANKRD22	Q5VYY1	191 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	OR2A2	Q6IF42	318 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	MFSD12	Q6NUT3	480 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	B3GLCT	Q6Y288	498 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	FAM214B	Q7L5A3	538 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	WFDC3	Q8IUB2	231 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	DND1	Q8IYX4	353 aa	Known RBP	7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	TAGAP	Q8N103	731 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	MYO1H	Q8N1T3	1032 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	LRRC57	Q8N9N7	239 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	RBM18	Q96H35	190 aa	Known RBP	7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	HIST1H2AH	Q96KK5	128 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	HBEGF	Q99075	208 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	NPAS1	Q99742	590 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	HIST1H2AJ	Q99878	128 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	H2AFJ	Q9BTM1	129 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	CCDC68	Q9H2F9	335 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	C12orf49	Q9H741	205 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	ACTR8	Q9H981	624 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	COPS7B	Q9H9Q2	264 aa	Predicted RBP	7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	BARX1	Q9HBU1	254 aa	Predicted RBP	7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	LYRM4	Q9HD34	91 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	PLSCR4	Q9NRQ2	329 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	KLRF1	Q9NZS2	232 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	FBXO5	Q9UKT4	447 aa		7.67	□□□□□ -1.18
NIF3L1-206	ENST00000416651	NPEPPSL1	A6NEC2	478 aa		7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651		E7EQL1	145 aa		7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651	MFAP3L	O75121	409 aa		7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651	CLEC3A	O75596	197 aa		7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651	GCM2	O75603	506 aa	Predicted RBP	7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651	PPM1B	O75688	479 aa		7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651	CBR3	O75828	277 aa		7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651	WDR47	O94967	919 aa		7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651	COX7A2	P14406	83 aa		7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651	S1PR1	P21453	382 aa		7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651	GPX3	P22352	226 aa		7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651	SRD5A2	P31213	254 aa		7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651	GZMK	P49863	264 aa		7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651	SLAMF1	Q13291	335 aa		7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651	EXOSC7	Q15024	291 aa	Known RBP	7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651	PPP4R4	Q6NUP7	873 aa		7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651	FAM111B	Q6SJ93	734 aa		7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651	MILR1	Q7Z6M3	343 aa		7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651	PALM2	Q8IXS6	379 aa		7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651	TAF15	Q92804	592 aa	Known RBP eCLIP	7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651	GCDH	Q92947	438 aa	Predicted RBP	7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651	RIT1	Q92963	219 aa		7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651	ZMYND19	Q96E35	227 aa	Predicted RBP	7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651	OMA1	Q96E52	524 aa		7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651	MS4A8	Q9BY19	250 aa		7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651	RTN4R	Q9BZR6	473 aa		7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651	OR51B5	Q9H339	312 aa		7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651	RPF2	Q9H7B2	306 aa	Known RBP	7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651	SNX15	Q9NRS6	342 aa		7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651	IARS2	Q9NSE4	1012 aa	Known RBP	7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651	NPAP1	Q9NZP6	1156 aa		7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651	ARMCX1	Q9P291	453 aa		7.66	□□□□□ -1.18
NIF3L1-206	ENST00000416651		A0A1W2PR48	441 aa		7.65	□□□□□ -1.18
NIF3L1-206	ENST00000416651	GOLGA6L9	A6NEM1	432 aa		7.65	□□□□□ -1.18
NIF3L1-206	ENST00000416651	PRAMEF25	A6NGN4	478 aa		7.65	□□□□□ -1.18
NIF3L1-206	ENST00000416651	ANKDD1B	A6NHY2	528 aa		7.65	□□□□□ -1.18
NIF3L1-206	ENST00000416651	SDR42E2	A6NKP2	422 aa		7.65	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms