RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 FOXC1Q12948 553 aa14.12□□□□□ -0.15
SCAF11-204ENST00000395454 GNA13Q14344 377 aa14.12□□□□□ -0.15
SCAF11-204ENST00000395454 ZNF750Q32MQ0 723 aa14.12□□□□□ -0.15
SCAF11-204ENST00000395454 RPS26P11Q5JNZ5 115 aaPredicted RBP14.12□□□□□ -0.15
SCAF11-204ENST00000395454 LRRC25Q8N386 305 aaPredicted RBP14.12□□□□□ -0.15
SCAF11-204ENST00000395454 BBS10Q8TAM1 723 aa14.12□□□□□ -0.15
SCAF11-204ENST00000395454 HDAC2Q92769 488 aaKnown RBP14.12□□□□□ -0.15
SCAF11-204ENST00000395454 PMEPA1Q969W9 287 aa14.12□□□□□ -0.15
SCAF11-204ENST00000395454 DHRS1Q96LJ7 313 aa14.12□□□□□ -0.15
SCAF11-204ENST00000395454 ZNF607Q96SK3 696 aa14.12□□□□□ -0.15
SCAF11-204ENST00000395454 PITX2Q99697 317 aa14.12□□□□□ -0.15
SCAF11-204ENST00000395454 PIP5K1AQ99755 562 aa14.12□□□□□ -0.15
SCAF11-204ENST00000395454 GABARAPL3Q9BY60 117 aa14.12□□□□□ -0.15
SCAF11-204ENST00000395454 C3orf14Q9HBI5 128 aa14.12□□□□□ -0.15
SCAF11-204ENST00000395454 FBXO8Q9NRD0 319 aa14.12□□□□□ -0.15
SCAF11-204ENST00000395454 EXD2Q9NVH0 621 aa14.12□□□□□ -0.15
SCAF11-204ENST00000395454 PCDHGA8Q9Y5G5 932 aa14.12□□□□□ -0.15
SCAF11-204ENST00000395454 DSPPQ9NZW4 1301 aa14.12□□□□□ -0.15
SCAF11-204ENST00000395454 HYKKA2RU49 373 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 TMEM247A6NEH6 219 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 CYR61O00622 381 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 ZNF749O43361 778 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 SCRG1O75711 98 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 SLITRK5O94991 958 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 OR12D1P0DN82 309 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 ATP6V1B1P15313 513 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 CDH2P19022 906 aaPredicted RBP14.11□□□□□ -0.15
SCAF11-204ENST00000395454 TNFRSF1BP20333 461 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 PPP2R1BP30154 601 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 TLX1P31314 330 aaPredicted RBP14.11□□□□□ -0.15
SCAF11-204ENST00000395454 FEN1P39748 380 aaKnown RBP14.11□□□□□ -0.15
SCAF11-204ENST00000395454 RAB15P59190 212 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 PRTGQ2VWP7 1150 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 EXOSC6Q5RKV6 272 aaKnown RBP14.11□□□□□ -0.15
SCAF11-204ENST00000395454 PWWP2BQ6NUJ5 590 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 TMEM107Q6UX40 140 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 BPHLQ86WA6 291 aaPredicted RBP14.11□□□□□ -0.15
SCAF11-204ENST00000395454 OR2L13Q8N349 312 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 TTC29Q8NA56 475 aaPredicted RBP14.11□□□□□ -0.15
SCAF11-204ENST00000395454 OR4K14Q8NGD5 310 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 OR9A2Q8NGT5 310 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 CSF3RQ99062 836 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 RUBCNLQ9H714 662 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 ENAMQ9NRM1 1142 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 UGT2B11O75310 529 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 SERPINB7O75635 380 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 TIAF1O95411 115 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 IFNW1P05000 195 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 FESP07332 822 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 FGF5P12034 268 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 SOX18P35713 384 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 MC3RP41968 323 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 OR1E2P47887 323 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 CRISP3P54108 245 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 LAPTM4AQ15012 233 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 SYPL1Q16563 259 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 RBM48Q5RL73 367 aaKnown RBP14.11□□□□□ -0.15
SCAF11-204ENST00000395454 DCAF12Q5T6F0 453 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 SMYD1Q8NB12 490 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 CHDHQ8NE62 594 aaPredicted RBP14.11□□□□□ -0.15
SCAF11-204ENST00000395454 OR5D16Q8NGK9 328 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 ZNF566Q969W8 418 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 MYCBPQ99417 103 aaPredicted RBP14.11□□□□□ -0.15
SCAF11-204ENST00000395454 NDC1Q9BTX1 674 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 ACER3Q9NUN7 267 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 ACAD8Q9UKU7 415 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 NDRG4Q9ULP0 352 aaKnown RBP14.11□□□□□ -0.15
SCAF11-204ENST00000395454 B3GALT1Q9Y5Z6 326 aa14.11□□□□□ -0.15
SCAF11-204ENST00000395454 FITM1A5D6W6 292 aa14.1□□□□□ -0.15
SCAF11-204ENST00000395454 TNFRSF11BO00300 401 aa14.1□□□□□ -0.15
SCAF11-204ENST00000395454 SLC28A2O43868 658 aa14.1□□□□□ -0.15
SCAF11-204ENST00000395454 MITFO75030 526 aaPredicted RBP14.1□□□□□ -0.15
SCAF11-204ENST00000395454 DNAJB6O75190 326 aa14.1□□□□□ -0.15
SCAF11-204ENST00000395454 ATP1B1P05026 303 aa14.1□□□□□ -0.15
SCAF11-204ENST00000395454 C8orf89P0DMQ9 161 aa14.1□□□□□ -0.15
SCAF11-204ENST00000395454 ATXN8OSP0DMR3 200 aa14.1□□□□□ -0.15
SCAF11-204ENST00000395454 ALAS2P22557 587 aa14.1□□□□□ -0.15
SCAF11-204ENST00000395454 GABREP78334 506 aa14.1□□□□□ -0.15
SCAF11-204ENST00000395454 LASP1Q14847 261 aaKnown RBP14.1□□□□□ -0.15
SCAF11-204ENST00000395454 FAM214AQ32MH5 1076 aa14.1□□□□□ -0.15
SCAF11-204ENST00000395454 TMEM164Q5U3C3 297 aa14.1□□□□□ -0.15
SCAF11-204ENST00000395454 LAIR2Q6ISS4 152 aa14.1□□□□□ -0.15
SCAF11-204ENST00000395454 HEPHL1Q6MZM0 1159 aa14.1□□□□□ -0.15
SCAF11-204ENST00000395454 TTLL10Q6ZVT0 673 aa14.1□□□□□ -0.15
SCAF11-204ENST00000395454 KRT73Q86Y46 540 aa14.1□□□□□ -0.15
SCAF11-204ENST00000395454 ZNF354BQ96LW1 612 aa14.1□□□□□ -0.15
SCAF11-204ENST00000395454 MS4A4EQ96PG1 132 aa14.1□□□□□ -0.15
SCAF11-204ENST00000395454 TAAR9Q96RI9 348 aa14.1□□□□□ -0.15
SCAF11-204ENST00000395454 CUTCQ9NTM9 273 aa14.1□□□□□ -0.15
SCAF11-204ENST00000395454 PTGFRNQ9P2B2 879 aa14.1□□□□□ -0.15
SCAF11-204ENST00000395454 DHCR7Q9UBM7 475 aaKnown RBP14.1□□□□□ -0.15
SCAF11-204ENST00000395454 LIPT1Q9Y234 373 aa14.1□□□□□ -0.15
SCAF11-204ENST00000395454 A0A0G2JPF8 293 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 VGLL3A8MV65 326 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 HNRNPCL2B2RXH8 293 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 HNRNPCL3B7ZW38 293 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 BCKDKO14874 412 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 TNFSF15O95150 251 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 CHRM4P08173 479 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 HNRNPCL4P0DMR1 293 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms