RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 CD244Q9BZW8 370 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 IKZF4Q9H2S9 585 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 BIN3Q9NQY0 253 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 PLEKHJ1Q9NW61 149 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 GALPQ9UBC7 116 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 DLGAP1O14490 977 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 ZNF207O43670 478 aaKnown RBP11.51□□□□□ -0.57
PCF11-201ENST00000298281 OR2T1O43869 369 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 UGDHO60701 494 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 STC1P52823 247 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 PRKCZQ05513 592 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 LASP1Q14847 261 aaKnown RBP11.51□□□□□ -0.57
PCF11-201ENST00000298281 BTBD16Q32M84 506 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 C22orf39Q6P5X5 142 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 OR56A3Q8NH54 315 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 ZUFSPQ96AP4 578 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 TWNKQ96RR1 684 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 COL20A1Q9P218 1284 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 NID2Q14112 1375 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 OR2M5A3KFT3 312 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 EFCAB7A8K855 629 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 APBB3O95704 486 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 HLA-FP30511 346 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 HOXA1P49639 335 aaPredicted RBP11.51□□□□□ -0.57
PCF11-201ENST00000298281 CSNK2A1P68400 391 aaPredicted RBP11.51□□□□□ -0.57
PCF11-201ENST00000298281 GAS6Q14393 721 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 FBXW12Q6X9E4 464 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 RNF111Q6ZNA4 994 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 TMPRSS12Q86WS5 348 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 CSNK2A3Q8NEV1 391 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 BBS10Q8TAM1 723 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 H1FXQ92522 213 aaKnown RBP11.51□□□□□ -0.57
PCF11-201ENST00000298281 SMIM12Q96EX1 92 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 OSBPL7Q9BZF2 842 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 RNF38Q9H0F5 515 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 NANOGQ9H9S0 305 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 ACOXLQ9NUZ1 547 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 MRPL15Q9P015 296 aaKnown RBP11.51□□□□□ -0.57
PCF11-201ENST00000298281 ANKRD30BLA7E2S9 258 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 LOC730098B7Z3J9 87 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 RNF225M0QZC1 329 aaPredicted RBP11.5□□□□□ -0.57
PCF11-201ENST00000298281 LCATP04180 440 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 GALNT2Q10471 571 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 FGL2Q14314 439 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 ZNF404Q494X3 552 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 RBMS3Q6XE24 437 aaKnown RBP11.5□□□□□ -0.57
PCF11-201ENST00000298281 SLC15A3Q8IY34 581 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 CCDC32Q9BV29 185 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 ATRNL1Q5VV63 1379 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 SERTM2A0A1B0GWG4 89 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 TCRBV21S2A2A0A5A6 115 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 SIX3O95343 332 aaPredicted RBP11.5□□□□□ -0.57
PCF11-201ENST00000298281 GSTP1P09211 210 aaKnown RBP11.5□□□□□ -0.57
PCF11-201ENST00000298281 UQCRC2P22695 453 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 POU6F2P78424 691 aaPredicted RBP11.5□□□□□ -0.57
PCF11-201ENST00000298281 NNATQ16517 81 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 CNPY1Q3B7I2 92 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 SYPL2Q5VXT5 272 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 SUCNR1Q9BXA5 334 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 PPM1HQ9ULR3 514 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 MED16Q9Y2X0 877 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 MYO5BQ9ULV0 1848 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 LOC105369274A0A096LPK9 316 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 AP1G1O43747 822 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 SC5DO75845 299 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 TUSC2O75896 110 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 MAS1P04201 325 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 TYRP14679 529 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 SFTPDP35247 375 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 CPOXP36551 454 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 MC2RQ01718 297 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 FADDQ13158 208 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 IL34Q6ZMJ4 242 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 KBTBD6Q86V97 674 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 OR4N4Q8N0Y3 316 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 TMEM104Q8NE00 496 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 RSC1A1Q92681 617 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 SLAMF9Q96A28 289 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 TMEM248Q9NWD8 314 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 HRASLS2Q9NWW9 162 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 SERPINF1P36955 418 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 GPR17Q13304 367 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 ARL6IP1Q15041 203 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 ZNF461Q8TAF7 563 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 EBF4Q9BQW3 602 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 OBP2BQ9NPH6 170 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 NME7Q9Y5B8 376 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 TMEM131LA2VDJ0 1609 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 SLC16A5O15375 505 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 KCNJ11Q14654 390 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 WDR20Q8TBZ3 569 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 MUCL1Q96DR8 90 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 VRK1Q99986 396 aaPredicted RBP11.5□□□□□ -0.57
PCF11-201ENST00000298281 ZMAT5Q9UDW3 170 aaKnown RBP11.5□□□□□ -0.57
PCF11-201ENST00000298281 TMEM98Q9Y2Y6 226 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 HS3ST4Q9Y661 456 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 EEF1E1-BLOC1S5C9J1V9 151 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 EEF1E1O43324 174 aaKnown RBP11.5□□□□□ -0.57
PCF11-201ENST00000298281 CLDN7O95471 211 aa11.5□□□□□ -0.57
PCF11-201ENST00000298281 BPIP17213 487 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms