RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 HOPXQ9BPY8 73 aaPredicted RBP18.39■□□□□ 0.54
PDLIM2-221ENST00000622702 CPPED1Q9BRF8 314 aaPredicted RBP18.39■□□□□ 0.54
PDLIM2-221ENST00000622702 SLC39A3Q9BRY0 314 aa18.39■□□□□ 0.54
PDLIM2-221ENST00000622702 FOLH1BQ9HBA9 442 aa18.39■□□□□ 0.54
PDLIM2-221ENST00000622702 ATP13A2Q9NQ11 1180 aa18.39■□□□□ 0.54
PDLIM2-221ENST00000622702 KALRNO60229 2985 aa18.39■□□□□ 0.54
PDLIM2-221ENST00000622702 SMG1Q96Q15 3661 aaKnown RBP18.39■□□□□ 0.53
PDLIM2-221ENST00000622702 C15orf38-AP3S2A0A0A6YYH1 394 aa18.39■□□□□ 0.53
PDLIM2-221ENST00000622702 TTC36A6NLP5 189 aa18.39■□□□□ 0.53
PDLIM2-221ENST00000622702 MASP2O00187 686 aa18.39■□□□□ 0.53
PDLIM2-221ENST00000622702 ZFAND5O76080 213 aa18.39■□□□□ 0.53
PDLIM2-221ENST00000622702 UNC5CO95185 931 aa18.39■□□□□ 0.53
PDLIM2-221ENST00000622702 C1QCP02747 245 aa18.39■□□□□ 0.53
PDLIM2-221ENST00000622702 CELA2AP08217 269 aa18.39■□□□□ 0.53
PDLIM2-221ENST00000622702 MAP3K8P41279 467 aa18.39■□□□□ 0.53
PDLIM2-221ENST00000622702 CCL11P51671 97 aa18.39■□□□□ 0.53
PDLIM2-221ENST00000622702 MVDP53602 400 aa18.39■□□□□ 0.53
PDLIM2-221ENST00000622702 RNF4P78317 190 aa18.39■□□□□ 0.53
PDLIM2-221ENST00000622702 KCNAB2Q13303 367 aa18.39■□□□□ 0.53
PDLIM2-221ENST00000622702 LASP1Q14847 261 aaKnown RBP18.39■□□□□ 0.53
PDLIM2-221ENST00000622702 NANOGP8Q6NSW7 305 aa18.39■□□□□ 0.53
PDLIM2-221ENST00000622702 SLC29A4Q7RTT9 530 aa18.39■□□□□ 0.53
PDLIM2-221ENST00000622702 ARPINQ7Z6K5 226 aa18.39■□□□□ 0.53
PDLIM2-221ENST00000622702 CDRT4Q8N9R6 151 aa18.39■□□□□ 0.53
PDLIM2-221ENST00000622702 CLEC1AQ8NC01 280 aa18.39■□□□□ 0.53
PDLIM2-221ENST00000622702 OR8J3Q8NGG0 315 aa18.39■□□□□ 0.53
PDLIM2-221ENST00000622702 SLC35G5Q96KT7 338 aa18.39■□□□□ 0.53
PDLIM2-221ENST00000622702 LMF2Q9BU23 707 aaKnown RBP18.39■□□□□ 0.53
PDLIM2-221ENST00000622702 ACTRT3Q9BYD9 372 aa18.39■□□□□ 0.53
PDLIM2-221ENST00000622702 NANOGQ9H9S0 305 aa18.39■□□□□ 0.53
PDLIM2-221ENST00000622702 EQTNQ9NQ60 294 aa18.39■□□□□ 0.53
PDLIM2-221ENST00000622702 NDE1Q9NXR1 346 aa18.39■□□□□ 0.53
PDLIM2-221ENST00000622702 DTX4Q9Y2E6 619 aa18.39■□□□□ 0.53
PDLIM2-221ENST00000622702 MED13Q9UHV7 2174 aa18.38■□□□□ 0.53
PDLIM2-221ENST00000622702 B2RBV5 119 aa18.38■□□□□ 0.53
PDLIM2-221ENST00000622702 NME6O75414 186 aaPredicted RBP18.38■□□□□ 0.53
PDLIM2-221ENST00000622702 SLC6A2P23975 617 aa18.38■□□□□ 0.53
PDLIM2-221ENST00000622702 SOX8P57073 446 aa18.38■□□□□ 0.53
PDLIM2-221ENST00000622702 TXNL4AP83876 142 aaKnown RBP18.38■□□□□ 0.53
PDLIM2-221ENST00000622702 ZNF155Q12901 538 aaPredicted RBP18.38■□□□□ 0.53
PDLIM2-221ENST00000622702 JMJD6Q6NYC1 403 aaPredicted RBP18.38■□□□□ 0.53
PDLIM2-221ENST00000622702 CDC73Q6P1J9 531 aa18.38■□□□□ 0.53
PDLIM2-221ENST00000622702 RNF130Q86XS8 419 aa18.38■□□□□ 0.53
PDLIM2-221ENST00000622702 LSM14AQ8ND56 463 aaKnown RBP18.38■□□□□ 0.53
PDLIM2-221ENST00000622702 C17orf47Q8NEP4 570 aa18.38■□□□□ 0.53
PDLIM2-221ENST00000622702 OR52N2Q8NGI0 321 aa18.38■□□□□ 0.53
PDLIM2-221ENST00000622702 OR5L2Q8NGL0 311 aa18.38■□□□□ 0.53
PDLIM2-221ENST00000622702 FBXO27Q8NI29 283 aa18.38■□□□□ 0.53
PDLIM2-221ENST00000622702 ADIPOR1Q96A54 375 aa18.38■□□□□ 0.53
PDLIM2-221ENST00000622702 C16orf58Q96GQ5 468 aa18.38■□□□□ 0.53
PDLIM2-221ENST00000622702 BTBD9Q96Q07 612 aa18.38■□□□□ 0.53
PDLIM2-221ENST00000622702 SH3GL1Q99961 368 aa18.38■□□□□ 0.53
PDLIM2-221ENST00000622702 DEFB126Q9BYW3 111 aa18.38■□□□□ 0.53
PDLIM2-221ENST00000622702 WWTR1Q9GZV5 400 aa18.38■□□□□ 0.53
PDLIM2-221ENST00000622702 ADNPQ9H2P0 1102 aa18.38■□□□□ 0.53
PDLIM2-221ENST00000622702 RAD21L1Q9H4I0 556 aa18.38■□□□□ 0.53
PDLIM2-221ENST00000622702 SERHL2Q9H4I8 314 aa18.38■□□□□ 0.53
PDLIM2-221ENST00000622702 IKZF5Q9H5V7 419 aa18.38■□□□□ 0.53
PDLIM2-221ENST00000622702 FAF1Q9UNN5 650 aaPredicted RBP18.38■□□□□ 0.53
PDLIM2-221ENST00000622702 CORO2BQ9UQ03 480 aa18.38■□□□□ 0.53
PDLIM2-221ENST00000622702 C2orf92A0A1B0GVN3 265 aa18.37■□□□□ 0.53
PDLIM2-221ENST00000622702 EVPLLA8MZ36 301 aa18.37■□□□□ 0.53
PDLIM2-221ENST00000622702 PRKNO60260 465 aaPredicted RBP18.37■□□□□ 0.53
PDLIM2-221ENST00000622702 HNRNPCL1O60812 293 aaKnown RBP18.37■□□□□ 0.53
PDLIM2-221ENST00000622702 ATP5HO75947 161 aa18.37■□□□□ 0.53
PDLIM2-221ENST00000622702 SOX30O94993 753 aa18.37■□□□□ 0.53
PDLIM2-221ENST00000622702 ITGAMP11215 1152 aa18.37■□□□□ 0.53
PDLIM2-221ENST00000622702 GPX2P18283 190 aa18.37■□□□□ 0.53
PDLIM2-221ENST00000622702 MATN1P21941 496 aa18.37■□□□□ 0.53
PDLIM2-221ENST00000622702 CPOXP36551 454 aa18.37■□□□□ 0.53
PDLIM2-221ENST00000622702 PPICP45877 212 aa18.37■□□□□ 0.53
PDLIM2-221ENST00000622702 ATRXP46100 2492 aa18.37■□□□□ 0.53
PDLIM2-221ENST00000622702 MAN2A2P49641 1150 aa18.37■□□□□ 0.53
PDLIM2-221ENST00000622702 DCAF7P61962 342 aa18.37■□□□□ 0.53
PDLIM2-221ENST00000622702 SOWAHCQ53LP3 525 aaPredicted RBP18.37■□□□□ 0.53
PDLIM2-221ENST00000622702 H3F3CQ6NXT2 135 aa18.37■□□□□ 0.53
PDLIM2-221ENST00000622702 ARMC10Q8N2F6 343 aa18.37■□□□□ 0.53
PDLIM2-221ENST00000622702 ZNF441Q8N8Z8 693 aa18.37■□□□□ 0.53
PDLIM2-221ENST00000622702 RBM15BQ8NDT2 890 aaKnown RBP18.37■□□□□ 0.53
PDLIM2-221ENST00000622702 PNPT1Q8TCS8 783 aaKnown RBP18.37■□□□□ 0.53
PDLIM2-221ENST00000622702 SLC39A7Q92504 469 aa18.37■□□□□ 0.53
PDLIM2-221ENST00000622702 ITPAQ9BY32 194 aa18.37■□□□□ 0.53
PDLIM2-221ENST00000622702 C1orf21Q9H246 121 aa18.37■□□□□ 0.53
PDLIM2-221ENST00000622702 GIN1Q9NXP7 522 aa18.37■□□□□ 0.53
PDLIM2-221ENST00000622702 GPR55Q9Y2T6 319 aaPredicted RBP18.37■□□□□ 0.53
PDLIM2-221ENST00000622702 DOCK10Q96BY6 2186 aa18.36■□□□□ 0.53
PDLIM2-221ENST00000622702 A6NL46 340 aa18.36■□□□□ 0.53
PDLIM2-221ENST00000622702 ASNA1O43681 348 aa18.36■□□□□ 0.53
PDLIM2-221ENST00000622702 NKX2-2O95096 273 aa18.36■□□□□ 0.53
PDLIM2-221ENST00000622702 DRD5P21918 477 aa18.36■□□□□ 0.53
PDLIM2-221ENST00000622702 ANXA11P50995 505 aaKnown RBP18.36■□□□□ 0.53
PDLIM2-221ENST00000622702 MTPNP58546 118 aa18.36■□□□□ 0.53
PDLIM2-221ENST00000622702 PSME3P61289 254 aa18.36■□□□□ 0.53
PDLIM2-221ENST00000622702 RPS26P62854 115 aaKnown RBP18.36■□□□□ 0.53
PDLIM2-221ENST00000622702 MXRA7P84157 204 aa18.36■□□□□ 0.53
PDLIM2-221ENST00000622702 PSG6Q00889 435 aa18.36■□□□□ 0.53
PDLIM2-221ENST00000622702 FADDQ13158 208 aa18.36■□□□□ 0.53
PDLIM2-221ENST00000622702 RGNQ15493 299 aa18.36■□□□□ 0.53
PDLIM2-221ENST00000622702 ZNHIT3Q15649 155 aaPredicted RBP18.36■□□□□ 0.53
PDLIM2-221ENST00000622702 HLA-DQA1Q5Y7H0 255 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms