RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 INHBAP08476 426 aa16.22■□□□□ 0.19
SHKBP1-227ENST00000602011 MRPS22P82650 360 aaKnown RBP16.22■□□□□ 0.19
SHKBP1-227ENST00000602011 TRAF3Q13114 568 aa16.22■□□□□ 0.19
SHKBP1-227ENST00000602011 EFR3AQ14156 821 aa16.22■□□□□ 0.19
SHKBP1-227ENST00000602011 BCL2A1Q16548 175 aa16.22■□□□□ 0.19
SHKBP1-227ENST00000602011 COMMD6Q7Z4G1 85 aa16.22■□□□□ 0.19
SHKBP1-227ENST00000602011 YRDCQ86U90 279 aaKnown RBP16.22■□□□□ 0.19
SHKBP1-227ENST00000602011 PLCZ1Q86YW0 608 aa16.22■□□□□ 0.19
SHKBP1-227ENST00000602011 CNPY4Q8N129 248 aa16.22■□□□□ 0.19
SHKBP1-227ENST00000602011 OR14L1PQ8NHC6 308 aa16.22■□□□□ 0.19
SHKBP1-227ENST00000602011 TM4SF18Q96CE8 201 aa16.22■□□□□ 0.19
SHKBP1-227ENST00000602011 RBM24Q9BX46 236 aaKnown RBP16.22■□□□□ 0.19
SHKBP1-227ENST00000602011 C1QTNF3Q9BXJ4 246 aa16.22■□□□□ 0.19
SHKBP1-227ENST00000602011 SLC12A4Q9UP95 1085 aa16.22■□□□□ 0.19
SHKBP1-227ENST00000602011 FRG2CA6NGY1 282 aa16.21■□□□□ 0.19
SHKBP1-227ENST00000602011 CLCA1A8K7I4 914 aa16.21■□□□□ 0.19
SHKBP1-227ENST00000602011 FAM171A2A8MVW0 826 aa16.21■□□□□ 0.19
SHKBP1-227ENST00000602011 SRD5A2P31213 254 aa16.21■□□□□ 0.19
SHKBP1-227ENST00000602011 MAGEA12P43365 314 aa16.21■□□□□ 0.19
SHKBP1-227ENST00000602011 SHEQ5VZ18 495 aa16.21■□□□□ 0.19
SHKBP1-227ENST00000602011 IFNEQ86WN2 208 aa16.21■□□□□ 0.19
SHKBP1-227ENST00000602011 TRIM42Q8IWZ5 723 aa16.21■□□□□ 0.19
SHKBP1-227ENST00000602011 PRR22Q8IZ63 422 aa16.21■□□□□ 0.19
SHKBP1-227ENST00000602011 C9orf106Q8NAJ2 232 aa16.21■□□□□ 0.19
SHKBP1-227ENST00000602011 OR4F6Q8NGB9 312 aa16.21■□□□□ 0.19
SHKBP1-227ENST00000602011 LINC01560Q8TB33 94 aa16.21■□□□□ 0.19
SHKBP1-227ENST00000602011 ZNF675Q8TD23 568 aa16.21■□□□□ 0.19
SHKBP1-227ENST00000602011 SLC44A1Q8WWI5 657 aa16.21■□□□□ 0.19
SHKBP1-227ENST00000602011 SELENOMQ8WWX9 145 aa16.21■□□□□ 0.19
SHKBP1-227ENST00000602011 MRRFQ96E11 262 aaKnown RBP16.21■□□□□ 0.19
SHKBP1-227ENST00000602011 SLC35A4Q96G79 324 aa16.21■□□□□ 0.19
SHKBP1-227ENST00000602011 COL21A1Q96P44 957 aa16.21■□□□□ 0.19
SHKBP1-227ENST00000602011 ITPAQ9BY32 194 aa16.21■□□□□ 0.19
SHKBP1-227ENST00000602011 MRPL46Q9H2W6 279 aaKnown RBP16.21■□□□□ 0.19
SHKBP1-227ENST00000602011 ZBTB26Q9HCK0 441 aa16.21■□□□□ 0.19
SHKBP1-227ENST00000602011 VPS29Q9UBQ0 182 aa16.21■□□□□ 0.19
SHKBP1-227ENST00000602011 DLGAP4Q9Y2H0 992 aa16.21■□□□□ 0.19
SHKBP1-227ENST00000602011 GPR55Q9Y2T6 319 aaPredicted RBP16.21■□□□□ 0.19
SHKBP1-227ENST00000602011 FREM3P0C091 2139 aa16.21■□□□□ 0.18
SHKBP1-227ENST00000602011 A0A1B0GTL3 188 aa16.2■□□□□ 0.18
SHKBP1-227ENST00000602011 A0A1W2PS29 197 aa16.2■□□□□ 0.18
SHKBP1-227ENST00000602011 PRAMEF25A6NGN4 478 aa16.2■□□□□ 0.18
SHKBP1-227ENST00000602011 H0Y3Z8 333 aa16.2■□□□□ 0.18
SHKBP1-227ENST00000602011 ARHGEF9O43307 516 aa16.2■□□□□ 0.18
SHKBP1-227ENST00000602011 KRT20P35900 424 aa16.2■□□□□ 0.18
SHKBP1-227ENST00000602011 FEN1P39748 380 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-227ENST00000602011 PTGDSP41222 190 aa16.2■□□□□ 0.18
SHKBP1-227ENST00000602011 GSTM5P46439 218 aa16.2■□□□□ 0.18
SHKBP1-227ENST00000602011 CPA2P48052 419 aa16.2■□□□□ 0.18
SHKBP1-227ENST00000602011 ETF1P62495 437 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-227ENST00000602011 LGSNQ5TDP6 509 aa16.2■□□□□ 0.18
SHKBP1-227ENST00000602011 OR2A2Q6IF42 318 aa16.2■□□□□ 0.18
SHKBP1-227ENST00000602011 FAM111BQ6SJ93 734 aa16.2■□□□□ 0.18
SHKBP1-227ENST00000602011 PLD6Q8N2A8 252 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-227ENST00000602011 WDSUB1Q8N9V3 476 aa16.2■□□□□ 0.18
SHKBP1-227ENST00000602011 WFDC11Q8NEX6 87 aa16.2■□□□□ 0.18
SHKBP1-227ENST00000602011 OR52R1Q8NGF1 315 aa16.2■□□□□ 0.18
SHKBP1-227ENST00000602011 KLHL29Q96CT2 875 aa16.2■□□□□ 0.18
SHKBP1-227ENST00000602011 NODALQ96S42 347 aa16.2■□□□□ 0.18
SHKBP1-227ENST00000602011 TUBA1CQ9BQE3 449 aa16.2■□□□□ 0.18
SHKBP1-227ENST00000602011 STMN4Q9H169 189 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-227ENST00000602011 TAS2R10Q9NYW0 307 aa16.2■□□□□ 0.18
SHKBP1-227ENST00000602011 TRPS1Q9UHF7 1281 aa16.2■□□□□ 0.18
SHKBP1-227ENST00000602011 EIF3LQ9Y262 564 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-227ENST00000602011 A8MXE2 369 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 LINC01387J3KSC0 135 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 UGT2B11O75310 529 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 REM1O75628 298 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 CBX7O95931 251 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 KRT6AP02538 564 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 HRGP04196 525 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 KRT6BP04259 564 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 RPS17P08708 135 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 HOXC12P31275 282 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 KRT6CP48668 564 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 EMDP50402 254 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 PNLIPRP2P54317 469 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 GFRA1P56159 465 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 EEFSECP57772 596 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 HMGCS1Q01581 520 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 CKAP4Q07065 602 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 GALNT1Q10472 559 aaPredicted RBP16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 TRADDQ15628 312 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 SGO1Q5FBB7 561 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 DCST1Q5T197 706 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 CHMP1BQ7LBR1 199 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 LCA5Q86VQ0 697 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 C18orf12Q96KH6 178 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 ZNF681Q96N22 645 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 BTBD9Q96Q07 612 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 SERHLQ9NQF3 203 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 ZDHHC18Q9NUE0 388 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 XPR1Q9UBH6 696 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 MCM8Q9UJA3 840 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 ZNF180Q9UJW8 692 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 PYCARDQ9ULZ3 195 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 DTX4Q9Y2E6 619 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 STK38LQ9Y2H1 464 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 PLLPQ9Y342 182 aa16.19■□□□□ 0.18
SHKBP1-227ENST00000602011 SH3D21A4FU49 640 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms