RNA–Protein interactions for RNA: ENST00000584960.1

RIOK3-210, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-210ENST00000584960 CT45A9P0DMV2 189 aa13.67□□□□□ -0.22
RIOK3-210ENST00000584960 EFNA1P20827 205 aaPredicted RBP13.67□□□□□ -0.22
RIOK3-210ENST00000584960 MAGEA8P43361 318 aa13.67□□□□□ -0.22
RIOK3-210ENST00000584960 PRKAG1P54619 331 aa13.67□□□□□ -0.22
RIOK3-210ENST00000584960 TP53BP2Q13625 1128 aa13.67□□□□□ -0.22
RIOK3-210ENST00000584960 MAPRE2Q15555 327 aa13.67□□□□□ -0.22
RIOK3-210ENST00000584960 CYP27C1Q4G0S4 372 aa13.67□□□□□ -0.22
RIOK3-210ENST00000584960 CT45A2Q5DJT8 189 aa13.67□□□□□ -0.22
RIOK3-210ENST00000584960 RPUSD3Q6P087 351 aaKnown RBP13.67□□□□□ -0.22
RIOK3-210ENST00000584960 ANKRD46Q86W74 232 aa13.67□□□□□ -0.22
RIOK3-210ENST00000584960 CLECL1Q8IZS7 167 aa13.67□□□□□ -0.22
RIOK3-210ENST00000584960 RBMXL3Q8N7X1 1067 aaKnown RBP13.67□□□□□ -0.22
RIOK3-210ENST00000584960 GOLM1Q8NBJ4 401 aa13.67□□□□□ -0.22
RIOK3-210ENST00000584960 SIMC1Q8NDZ2 872 aa13.67□□□□□ -0.22
RIOK3-210ENST00000584960 SLC39A7Q92504 469 aa13.67□□□□□ -0.22
RIOK3-210ENST00000584960 PNPLA2Q96AD5 504 aa13.67□□□□□ -0.22
RIOK3-210ENST00000584960 PHF12Q96QT6 1004 aa13.67□□□□□ -0.22
RIOK3-210ENST00000584960 ACTRT3Q9BYD9 372 aa13.67□□□□□ -0.22
RIOK3-210ENST00000584960 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.67□□□□□ -0.22
RIOK3-210ENST00000584960 NXF5Q9H1B4 397 aaKnown RBP13.67□□□□□ -0.22
RIOK3-210ENST00000584960 ANKRA2Q9H9E1 313 aa13.67□□□□□ -0.22
RIOK3-210ENST00000584960 LIN28AQ9H9Z2 209 aaKnown RBP13.67□□□□□ -0.22
RIOK3-210ENST00000584960 Q9N2J8 555 aa13.67□□□□□ -0.22
RIOK3-210ENST00000584960 HPF1Q9NWY4 346 aa13.67□□□□□ -0.22
RIOK3-210ENST00000584960 PLA2G3Q9NZ20 509 aa13.67□□□□□ -0.22
RIOK3-210ENST00000584960 ANAPC2Q9UJX6 822 aa13.67□□□□□ -0.22
RIOK3-210ENST00000584960 FAF1Q9UNN5 650 aaPredicted RBP13.67□□□□□ -0.22
RIOK3-210ENST00000584960 ERVK-11Q9UQG0 969 aa13.67□□□□□ -0.22
RIOK3-210ENST00000584960 PCDHGB3Q9Y5G1 929 aa13.67□□□□□ -0.22
RIOK3-210ENST00000584960 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.66□□□□□ -0.22
RIOK3-210ENST00000584960 DUXAA6NLW8 204 aa13.66□□□□□ -0.22
RIOK3-210ENST00000584960 TP53I11O14683 189 aa13.66□□□□□ -0.22
RIOK3-210ENST00000584960 NKX2-2O95096 273 aa13.66□□□□□ -0.22
RIOK3-210ENST00000584960 NADKO95544 446 aaPredicted RBP13.66□□□□□ -0.22
RIOK3-210ENST00000584960 ANP32DO95626 131 aa13.66□□□□□ -0.22
RIOK3-210ENST00000584960 HMGN2P05204 90 aaKnown RBP13.66□□□□□ -0.22
RIOK3-210ENST00000584960 SNRPB2P08579 225 aaKnown RBP13.66□□□□□ -0.22
RIOK3-210ENST00000584960 FBXO45P0C2W1 286 aa13.66□□□□□ -0.22
RIOK3-210ENST00000584960 CD46P15529 392 aa13.66□□□□□ -0.22
RIOK3-210ENST00000584960 MAP3K8P41279 467 aa13.66□□□□□ -0.22
RIOK3-210ENST00000584960 ANXA11P50995 505 aaKnown RBP13.66□□□□□ -0.22
RIOK3-210ENST00000584960 PSMD4P55036 377 aaKnown RBP13.66□□□□□ -0.22
RIOK3-210ENST00000584960 RPP38P78345 283 aaKnown RBP13.66□□□□□ -0.22
RIOK3-210ENST00000584960 MRPS22P82650 360 aaKnown RBP13.66□□□□□ -0.22
RIOK3-210ENST00000584960 PSG6Q00889 435 aa13.66□□□□□ -0.22
RIOK3-210ENST00000584960 ZNF155Q12901 538 aaPredicted RBP13.66□□□□□ -0.22
RIOK3-210ENST00000584960 ZNF169Q14929 603 aaPredicted RBP13.66□□□□□ -0.22
RIOK3-210ENST00000584960 OR1C1Q15619 314 aa13.66□□□□□ -0.22
RIOK3-210ENST00000584960 TIGD2Q4W5G0 525 aa13.66□□□□□ -0.22
RIOK3-210ENST00000584960 MFSD12Q6NUT3 480 aa13.66□□□□□ -0.22
RIOK3-210ENST00000584960 RTL4Q6ZR62 310 aa13.66□□□□□ -0.22
RIOK3-210ENST00000584960 SZRD1Q7Z422 152 aa13.66□□□□□ -0.22
RIOK3-210ENST00000584960 CYP4Z2PQ8N1L4 340 aa13.66□□□□□ -0.22
RIOK3-210ENST00000584960 GIMAP5Q96F15 307 aa13.66□□□□□ -0.22
RIOK3-210ENST00000584960 SECISBP2Q96T21 854 aaKnown RBP13.66□□□□□ -0.22
RIOK3-210ENST00000584960 STACQ99469 402 aa13.66□□□□□ -0.22
RIOK3-210ENST00000584960 TRIM4Q9C037 500 aa13.66□□□□□ -0.22
RIOK3-210ENST00000584960 FAM107BQ9H098 131 aa13.66□□□□□ -0.22
RIOK3-210ENST00000584960 TIMMDC1Q9NPL8 285 aa13.66□□□□□ -0.22
RIOK3-210ENST00000584960 SLC52A3Q9NQ40 469 aa13.66□□□□□ -0.22
RIOK3-210ENST00000584960 DUSP22Q9NRW4 184 aa13.66□□□□□ -0.22
RIOK3-210ENST00000584960 DTX4Q9Y2E6 619 aa13.66□□□□□ -0.22
RIOK3-210ENST00000584960 ITPR1Q14643 2758 aa13.66□□□□□ -0.22
RIOK3-210ENST00000584960 PIEZO2Q9H5I5 2752 aa13.66□□□□□ -0.22
RIOK3-210ENST00000584960 EXPH5Q8NEV8 1989 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 COL6A6A6NMZ7 2263 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 C9JVG2 144 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 NR5A2O00482 541 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 ABCB7O75027 752 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 OR6B1O95007 311 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 KRT75O95678 551 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 FAM107AO95990 144 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 AGR2O95994 175 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 ALOX5P09917 674 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 ABCD3P28288 659 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 SOAT1P35610 550 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 KRT20P35900 424 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 SOX3P41225 446 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 PNLIPRP2P54317 469 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 SF3A3Q12874 501 aaKnown RBP eCLIP13.65□□□□□ -0.22
RIOK3-210ENST00000584960 INAQ16352 499 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 NTRK2Q16620 822 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 DECR1Q16698 335 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 ZNF791Q3KP31 576 aaPredicted RBP13.65□□□□□ -0.22
RIOK3-210ENST00000584960 SLC25A25Q6KCM7 469 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 CDC73Q6P1J9 531 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 LYPD8Q6UX82 237 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 IL20RBQ6UXL0 311 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 C16orf47Q6ZP98 133 aaPredicted RBP13.65□□□□□ -0.22
RIOK3-210ENST00000584960 ZNF621Q6ZSS3 439 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 NUP54Q7Z3B4 507 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 C6orf120Q7Z4R8 191 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 SLC44A2Q8IWA5 706 aaPredicted RBP13.65□□□□□ -0.22
RIOK3-210ENST00000584960 SLC34A3Q8N130 599 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 TMEM178AQ8NBL3 297 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 MDS2Q8NDY4 140 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 MIPOL1Q8TD10 442 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 ADAMTS15Q8TE58 950 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 GTF2H4Q92759 462 aa13.65□□□□□ -0.22
RIOK3-210ENST00000584960 VPS33AQ96AX1 596 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms