RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 APOC3P02656 99 aa9.96□□□□□ -0.81
USB1-212ENST00000566082 ANXA2P07355 339 aaKnown RBP9.96□□□□□ -0.81
USB1-212ENST00000566082 ZNF3P17036 446 aa9.96□□□□□ -0.81
USB1-212ENST00000566082 IMPA1P29218 277 aa9.96□□□□□ -0.81
USB1-212ENST00000566082 NAA10P41227 235 aaPredicted RBP9.96□□□□□ -0.81
USB1-212ENST00000566082 PITPNBP48739 271 aa9.96□□□□□ -0.81
USB1-212ENST00000566082 ID2Q02363 134 aa9.96□□□□□ -0.81
USB1-212ENST00000566082 ZNF33BQ06732 778 aa9.96□□□□□ -0.81
USB1-212ENST00000566082 RAB40BQ12829 278 aa9.96□□□□□ -0.81
USB1-212ENST00000566082 PLPP4Q5VZY2 271 aa9.96□□□□□ -0.81
USB1-212ENST00000566082 WASH2PQ6VEQ5 465 aa9.96□□□□□ -0.81
USB1-212ENST00000566082 PARGQ86W56 976 aa9.96□□□□□ -0.81
USB1-212ENST00000566082 GALNT11Q8NCW6 608 aa9.96□□□□□ -0.81
USB1-212ENST00000566082 SAMD8Q96LT4 415 aa9.96□□□□□ -0.81
USB1-212ENST00000566082 PRR14Q9BWN1 585 aa9.96□□□□□ -0.81
USB1-212ENST00000566082 KLF16Q9BXK1 252 aaPredicted RBP9.96□□□□□ -0.81
USB1-212ENST00000566082 CDCA4Q9BXL8 241 aa9.96□□□□□ -0.81
USB1-212ENST00000566082 PCBD2Q9H0N5 130 aa9.96□□□□□ -0.81
USB1-212ENST00000566082 QRSL1Q9H0R6 528 aaKnown RBP9.96□□□□□ -0.81
USB1-212ENST00000566082 SLC28A3Q9HAS3 691 aa9.96□□□□□ -0.81
USB1-212ENST00000566082 SLC52A3Q9NQ40 469 aa9.96□□□□□ -0.81
USB1-212ENST00000566082 BRWD3Q6RI45 1802 aa9.96□□□□□ -0.81
USB1-212ENST00000566082 UBR3Q6ZT12 1888 aa9.96□□□□□ -0.81
USB1-212ENST00000566082 SDK1Q7Z5N4 2213 aa9.96□□□□□ -0.81
USB1-212ENST00000566082 GMFGO60234 142 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 RCBTB2O95199 551 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 NDUFV2P19404 249 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 BMP8BP34820 402 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 AHRP35869 848 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 SOX2P48431 317 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 ILKQ13418 452 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 PLK5Q496M5 336 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 BMP8AQ7Z5Y6 402 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 CYB561A3Q8NBI2 242 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 KREMEN2Q8NCW0 462 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 OR51L1Q8NGJ5 315 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 OR52I1Q8NGK6 324 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 CEP76Q8TAP6 659 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 ACOT12Q8WYK0 555 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 TM9SF4Q92544 642 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 WBP2Q969T9 261 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 ZNF689Q96CS4 500 aaPredicted RBP9.96□□□□□ -0.82
USB1-212ENST00000566082 MCCC1Q96RQ3 725 aaPredicted RBP9.96□□□□□ -0.82
USB1-212ENST00000566082 CXorf36Q9H7Y0 433 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 TMPRSS11EQ9UL52 423 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 CACNG2Q9Y698 323 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 FMO6PO60774 539 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 CSF3P09919 207 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 BTN3A2P78410 334 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 KIAA0040Q15053 153 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 KHDRBS2Q5VWX1 349 aaKnown RBP9.96□□□□□ -0.82
USB1-212ENST00000566082 SAXO2Q658L1 398 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 FCRLBQ6BAA4 426 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 RSPO2Q6UXX9 243 aaPredicted RBP9.96□□□□□ -0.82
USB1-212ENST00000566082 OR56A1Q8NGH5 318 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 SUN3Q8TAQ9 357 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 FANK1Q8TC84 345 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 APH1BQ8WW43 257 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 CHFRQ96EP1 664 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 MED30Q96HR3 178 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 IGSF21Q96ID5 467 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 MACROD1Q9BQ69 325 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 RSPH9Q9H1X1 276 aaPredicted RBP9.96□□□□□ -0.82
USB1-212ENST00000566082 KCNK6Q9Y257 313 aa9.96□□□□□ -0.82
USB1-212ENST00000566082 GABRPO00591 440 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 B4GALT3O60512 393 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 RASGRP1O95267 797 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 ETHE1O95571 254 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 IFNA16P05015 189 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 CSN2P05814 226 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 FURINP09958 794 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 ELAVL4P26378 380 aaKnown RBP9.95□□□□□ -0.82
USB1-212ENST00000566082 OR12D2P58182 307 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 DSC1Q08554 894 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 ZNF155Q12901 538 aaPredicted RBP9.95□□□□□ -0.82
USB1-212ENST00000566082 ZNF385BQ569K4 471 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 WDR53Q7Z5U6 358 aaPredicted RBP9.95□□□□□ -0.82
USB1-212ENST00000566082 SLC7A13Q8TCU3 470 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 SLC25A46Q96AG3 418 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 OTUB2Q96DC9 234 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 ELMOD3Q96FG2 381 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 ALG8Q9BVK2 526 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 SRRQ9GZT4 340 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 ARL6Q9H0F7 186 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 CD93Q9NPY3 652 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 A0A1B0GVT2 93 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 TMEM202A6NGA9 273 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 TRIM64A6NGJ6 449 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 C1QCP02747 245 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 ETV5P41161 510 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 XCR1P46094 333 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 CAPZA2P47755 286 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 ETV1P50549 477 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 ASAH1Q13510 395 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 TOR1AIP1Q5JTV8 583 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 NDUFAF5Q5TEU4 345 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 OLFML2AQ68BL7 652 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 ZNF782Q6ZMW2 699 aaPredicted RBP9.95□□□□□ -0.82
USB1-212ENST00000566082 TMED4Q7Z7H5 227 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 TMEM173Q86WV6 379 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms