RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 PINK1Q9BXM7 581 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 RBCK1Q9BYM8 510 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 ANKRD60Q9BZ19 345 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 CNTNAP3Q9BZ76 1288 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 SLC7A5P2Q9GIP4 190 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 ARRDC1-AS1Q9H2J1 176 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 SYNDIG1Q9H7V2 258 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 MTHFD2LQ9H903 347 aaPredicted RBP12.88□□□□□ -0.35
TPM1-215ENST00000558868 CXorf21Q9HAI6 301 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 ADAP2Q9NPF8 381 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 POLE3Q9NRF9 147 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 FAM86C1Q9NVL1 165 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 C3orf18Q9UK00 162 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 SLC13A4Q9UKG4 626 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 SATB2Q9UPW6 733 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 SLC9A8Q9Y2E8 581 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 IFT52Q9Y366 437 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 SH3GLB1Q9Y371 365 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 ARID1BQ8NFD5 2236 aaPredicted RBP12.88□□□□□ -0.35
TPM1-215ENST00000558868 CABIN1Q9Y6J0 2220 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 PRAMEF27A3QJZ7 478 aa12.87□□□□□ -0.35
TPM1-215ENST00000558868 TNFRSF11BO00300 401 aa12.87□□□□□ -0.35
TPM1-215ENST00000558868 SYT5O00445 386 aa12.87□□□□□ -0.35
TPM1-215ENST00000558868 H6PDO95479 791 aa12.87□□□□□ -0.35
TPM1-215ENST00000558868 CHN2P52757 468 aa12.87□□□□□ -0.35
TPM1-215ENST00000558868 PPP2R2BQ00005 443 aa12.87□□□□□ -0.35
TPM1-215ENST00000558868 LPAL2Q16609 132 aa12.87□□□□□ -0.35
TPM1-215ENST00000558868 DUSP7Q16829 419 aa12.87□□□□□ -0.35
TPM1-215ENST00000558868 SYT16Q17RD7 645 aa12.87□□□□□ -0.35
TPM1-215ENST00000558868 SLC36A3Q495N2 470 aa12.87□□□□□ -0.35
TPM1-215ENST00000558868 EXOSC6Q5RKV6 272 aaKnown RBP12.87□□□□□ -0.35
TPM1-215ENST00000558868 TTC23Q5W5X9 447 aa12.87□□□□□ -0.35
TPM1-215ENST00000558868 KRT80Q6KB66 452 aa12.87□□□□□ -0.35
TPM1-215ENST00000558868 ZC3H14Q6PJT7 736 aaKnown RBP12.87□□□□□ -0.35
TPM1-215ENST00000558868 TBPL2Q6SJ96 375 aa12.87□□□□□ -0.35
TPM1-215ENST00000558868 QSOX2Q6ZRP7 698 aa12.87□□□□□ -0.35
TPM1-215ENST00000558868 CHERPQ8IWX8 916 aaKnown RBP12.87□□□□□ -0.35
TPM1-215ENST00000558868 METTL27Q8N6F8 245 aaPredicted RBP12.87□□□□□ -0.35
TPM1-215ENST00000558868 SLC16A11Q8NCK7 471 aa12.87□□□□□ -0.35
TPM1-215ENST00000558868 CHDHQ8NE62 594 aaPredicted RBP12.87□□□□□ -0.35
TPM1-215ENST00000558868 ZNF555Q8NEP9 628 aa12.87□□□□□ -0.35
TPM1-215ENST00000558868 OR2I1PQ8NGU4 316 aa12.87□□□□□ -0.35
TPM1-215ENST00000558868 CYGBQ8WWM9 190 aa12.87□□□□□ -0.35
TPM1-215ENST00000558868 NR4A3Q92570 626 aa12.87□□□□□ -0.35
TPM1-215ENST00000558868 CCDC74BQ96LY2 380 aa12.87□□□□□ -0.35
TPM1-215ENST00000558868 MKKSQ9NPJ1 570 aaPredicted RBP12.87□□□□□ -0.35
TPM1-215ENST00000558868 SCOCQ9UIL1 159 aa12.87□□□□□ -0.35
TPM1-215ENST00000558868 RARRES3Q9UL19 164 aa12.87□□□□□ -0.35
TPM1-215ENST00000558868 ZNF232Q9UNY5 417 aa12.87□□□□□ -0.35
TPM1-215ENST00000558868 DSPPQ9NZW4 1301 aa12.87□□□□□ -0.35
TPM1-215ENST00000558868 MYOCOSA0A1B0GUC4 107 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 A8MVJ9 347 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 DLGAP1O14490 977 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 FLRT2O43155 660 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 GALR2O43603 387 aaPredicted RBP12.86□□□□□ -0.35
TPM1-215ENST00000558868 HS6ST1O60243 411 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 PRAMEF2O60811 474 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 LDOC1O95751 146 aaPredicted RBP12.86□□□□□ -0.35
TPM1-215ENST00000558868 GP1BAP07359 652 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 LYNP07948 512 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 GUSBP08236 651 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 ACP2P11117 423 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 TNNI3P19429 210 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 MYF6P23409 242 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 PRKAR1BP31321 381 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 RRM2P31350 389 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 OR1E2P47887 323 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 IST1P53990 364 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 SPIBQ01892 262 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 FUT5Q11128 374 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 ZNF155Q12901 538 aaPredicted RBP12.86□□□□□ -0.35
TPM1-215ENST00000558868 DUSP5Q16690 384 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 ARHGAP40Q5TG30 622 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 RHBDD2Q6NTF9 364 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 DHRS4L2Q6PKH6 230 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 UGT2A3Q6UWM9 527 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 CARM1Q86X55 608 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 PEX5LQ8IYB4 626 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 COX18Q8N8Q8 333 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 OR7G1Q8NGA0 311 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 GPR32P1Q8NGA4 272 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 OR52R1Q8NGF1 315 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 CDS1Q92903 461 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 OTUB1Q96FW1 271 aaPredicted RBP12.86□□□□□ -0.35
TPM1-215ENST00000558868 AMBRA1Q9C0C7 1298 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 SLC38A1Q9H2H9 487 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 EVA1AQ9H8M9 152 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 ANKRA2Q9H9E1 313 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 LANCL2Q9NS86 450 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 KLHL28Q9NXS3 571 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 VNN3Q9NY84 501 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 PDP1Q9P0J1 537 aaPredicted RBP12.86□□□□□ -0.35
TPM1-215ENST00000558868 KIF17Q9P2E2 1029 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 WDR45Q9Y484 360 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 KCNE3Q9Y6H6 103 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 MAU2Q9Y6X3 613 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 U3KQV3 271 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 ADAMTS9Q9P2N4 1935 aa12.86□□□□□ -0.35
TPM1-215ENST00000558868 STX11O75558 287 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 CDC123O75794 336 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms