RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 C1orf226A1L170 272 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 H3BUI4 141 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 NDUFV2P19404 249 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 LEPRP48357 1165 aaKnown RBP9.49□□□□□ -0.89
COL4A6-208ENST00000538570 MFSD13AQ14CX5 517 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 SSX7Q7RTT5 188 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 SMOQ99835 787 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 ZNF442Q9H7R0 627 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 PLEKHA3Q9HB20 300 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 HHATLQ9HCP6 504 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 UBR1Q8IWV7 1749 aa9.49□□□□□ -0.89
COL4A6-208ENST00000538570 GXYLT2A0PJZ3 443 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 ZNF860A6NHJ4 632 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 H3BMQ9 156 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 KDELR2P33947 212 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 ERVFC1P60507 584 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 PLCXD2Q0VAA5 305 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 TDGQ13569 410 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 UGT3A2Q3SY77 523 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 TMEM107Q6UX40 140 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 LRRC25Q8N386 305 aaPredicted RBP9.48□□□□□ -0.89
COL4A6-208ENST00000538570 OR13J1Q8NGT2 312 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 ARL11Q969Q4 196 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 PTCHD1Q96NR3 888 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 POT1Q9NUX5 634 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 NFS1Q9Y697 457 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 GLTPD2A6NH11 291 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 YY2O15391 372 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 MAS1P04201 325 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 RD3LP0DJH9 198 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 GRPRP30550 384 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 THBS2P35442 1172 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 GGT2P36268 569 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 FASLGP48023 281 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 RNF144AP50876 292 aaPredicted RBP9.48□□□□□ -0.89
COL4A6-208ENST00000538570 MAP4K2Q12851 820 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 BCL2L15Q5TBC7 163 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 FAM205BPQ63HN1 556 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 ZNF783Q6ZMS7 281 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 ALDH16A1Q8IZ83 802 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 KLHDC7BQ96G42 594 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 LRR1Q96L50 414 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 C1orf74Q96LT6 269 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 AIG1Q9NVV5 245 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 REV1Q9UBZ9 1251 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 HMX3A6NHT5 357 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 CYTIPO60759 359 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 FMO6PO60774 539 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 SLC16A8O95907 504 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 MSX1P28360 303 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 CRYZQ08257 329 aaKnown RBP9.48□□□□□ -0.89
COL4A6-208ENST00000538570 RNF111Q6ZNA4 994 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 TRIM46Q7Z4K8 759 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 ZNF440Q8IYI8 595 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 ACBD7Q8N6N7 88 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 PXYLP1Q8TE99 480 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 MR1Q95460 341 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 C12orf42Q96LP6 360 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 NSUN5Q96P11 429 aaKnown RBP9.48□□□□□ -0.89
COL4A6-208ENST00000538570 ZNF559Q9BR84 538 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 DNTTIP1Q9H147 329 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 MMP28Q9H239 520 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 INSL5Q9Y5Q6 135 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 MED1Q15648 1581 aaPredicted RBP9.48□□□□□ -0.89
COL4A6-208ENST00000538570 ANKRD34BA5PLL1 514 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 SPDEFO95238 335 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 HLA-EP13747 358 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 PGCP20142 388 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 POLR2HP52434 150 aaKnown RBP9.48□□□□□ -0.89
COL4A6-208ENST00000538570 BCL2A1Q16548 175 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 ZNF805Q5CZA5 627 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 AVPI1Q5T686 147 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 SETD7Q8WTS6 366 aaKnown RBP9.48□□□□□ -0.89
COL4A6-208ENST00000538570 GLYATL2Q8WU03 294 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 KIAA1143Q96AT1 154 aaPredicted RBP9.48□□□□□ -0.89
COL4A6-208ENST00000538570 TMIGD2Q96BF3 282 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 MALSU1Q96EH3 234 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 OR1F2PQ96R84 312 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 PELOQ9BRX2 385 aaKnown RBP9.48□□□□□ -0.89
COL4A6-208ENST00000538570 A0A0D9SEW6 157 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 CDC123O75794 336 aaPredicted RBP9.48□□□□□ -0.89
COL4A6-208ENST00000538570 SNAPINO95295 136 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 OR8U9P0C7N5 309 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 FBLP22087 321 aaKnown RBP9.48□□□□□ -0.89
COL4A6-208ENST00000538570 GPR17Q13304 367 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 ELOCQ15369 112 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 RNASE10Q5GAN6 216 aaKnown RBP9.48□□□□□ -0.89
COL4A6-208ENST00000538570 MINDY1Q8N5J2 469 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 TAAR8Q969N4 342 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 CAPNS2Q96L46 248 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 RNF215Q9Y6U7 377 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 GOSR2O14653 212 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 CNOT4O95628 575 aaKnown RBP9.48□□□□□ -0.89
COL4A6-208ENST00000538570 AK1P00568 194 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 GKP32189 559 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 IDH3GP51553 393 aaPredicted RBP9.48□□□□□ -0.89
COL4A6-208ENST00000538570 ACTBP60709 375 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 ACTG1P63261 375 aa9.48□□□□□ -0.89
COL4A6-208ENST00000538570 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.48□□□□□ -0.89
COL4A6-208ENST00000538570 SLC22A10Q63ZE4 541 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms