RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 PUDPQ08623 228 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 UNC119Q13432 240 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 SPHARQ15513 63 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 CD226Q15762 336 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 LRRC36Q1X8D7 754 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 FAM83EQ2M2I3 478 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 C9orf152Q5JTZ5 239 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 SPIN3Q5JUX0 258 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 DDI2Q5TDH0 399 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 MEDAGQ5VYS4 303 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 OR5M10Q6IEU7 315 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 OLFM4Q6UX06 510 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 Q6ZRG5 221 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 LINC00336Q6ZUF6 198 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 LUZP1Q86V48 1076 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 GCNT2Q8N0V5 402 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 POMGNT2Q8NAT1 580 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 OR51G1Q8NGK1 321 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 SAP25Q8TEE9 199 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 RAD54LQ92698 747 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 MCHR2Q969V1 340 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 RNF185Q96GF1 192 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 VPS39Q96JC1 886 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 CEP170P1Q96L14 293 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 RMDN2Q96LZ7 410 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 KLF6Q99612 283 aaPredicted RBP0.21□□□□□ -2.38
COPB1-212ENST00000534771 TREX2Q9BQ50 279 aaPredicted RBP0.21□□□□□ -2.38
COPB1-212ENST00000534771 GPR174Q9BXC1 333 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 NUSAP1Q9BXS6 441 aaKnown RBP0.21□□□□□ -2.38
COPB1-212ENST00000534771 CXXC4Q9H2H0 198 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 SPNS1Q9H2V7 528 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 KAT8Q9H7Z6 458 aaKnown RBP0.21□□□□□ -2.38
COPB1-212ENST00000534771 SLC25A19Q9HC21 320 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 EML4Q9HC35 981 aaKnown RBP0.21□□□□□ -2.38
COPB1-212ENST00000534771 EXOSC3Q9NQT5 275 aaKnown RBP0.21□□□□□ -2.38
COPB1-212ENST00000534771 CENPMQ9NSP4 180 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 RBAKQ9NYW8 714 aaPredicted RBP0.21□□□□□ -2.38
COPB1-212ENST00000534771 ONECUT1Q9UBC0 465 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 TUBGCP4Q9UGJ1 667 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 VPS28Q9UK41 221 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 FZR1Q9UM11 496 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 RLFQ13129 1914 aa0.21□□□□□ -2.38
COPB1-212ENST00000534771 MTCL1Q9Y4B5 1905 aaKnown RBP0.21□□□□□ -2.38
COPB1-212ENST00000534771 NPIPA5A0A0B4J1W7 369 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 GJE1A6NN92 205 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 NPIPA5E9PKD4 350 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 C11orf98E9PRG8 122 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 GFYI3L273 518 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 DEDDO75618 318 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 PSMD10O75832 226 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 KLF8O95600 359 aaPredicted RBP0.2□□□□□ -2.38
COPB1-212ENST00000534771 FYNP06241 537 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 RHOXF2BP0C7M4 288 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 MBL2P11226 248 aaPredicted RBP0.2□□□□□ -2.38
COPB1-212ENST00000534771 MUC1P15941 1255 aaPredicted RBP0.2□□□□□ -2.38
COPB1-212ENST00000534771 UQCRC2P22695 453 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 PSMB4P28070 264 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 HOXA9P31269 272 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 HPDP32754 393 aaPredicted RBP0.2□□□□□ -2.38
COPB1-212ENST00000534771 BTDP43251 543 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 KIR3DL2P43630 455 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 CAPZA2P47755 286 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 OR3A1P47881 315 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 CRISP1P54107 249 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 APOC4P55056 127 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 CACNG7P62955 275 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 CDKL1Q00532 357 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 MZT1Q08AG7 82 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 MEF2DQ14814 521 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 OR1C1Q15619 314 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 CAMK4Q16566 473 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 MEA1Q16626 185 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 LBHQ53QV2 105 aaPredicted RBP0.2□□□□□ -2.38
COPB1-212ENST00000534771 ALFQ53S48 1182 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 BMP2KLQ5H9B9 411 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 LGSNQ5TDP6 509 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 UFSP1Q6NVU6 142 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 CXCL17Q6UXB2 119 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 RBPMS2Q6ZRY4 209 aaKnown RBP0.2□□□□□ -2.38
COPB1-212ENST00000534771 OAFQ86UD1 273 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 ITIH5Q86UX2 942 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 WDR49Q8IV35 697 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 LINC00518Q8N0U6 118 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 SIX6OS1Q8N1H7 587 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 CSNK1A1LQ8N752 337 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 OR10G2Q8NGC3 310 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 OR52P1PQ8NH57 321 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 FNDC8Q8TC99 324 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 AENQ8WTP8 325 aaKnown RBP0.2□□□□□ -2.38
COPB1-212ENST00000534771 PRCCQ92733 491 aaPredicted RBP0.2□□□□□ -2.38
COPB1-212ENST00000534771 HAVCR1Q96D42 359 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 PELI1Q96FA3 418 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 COL21A1Q96P44 957 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 SPAG8Q99932 426 aaPredicted RBP0.2□□□□□ -2.38
COPB1-212ENST00000534771 SDF4Q9BRK5 362 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 CHCHD6Q9BRQ6 235 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 IDI2Q9BXS1 227 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 DCTPP1Q9H773 170 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 LHX9Q9NQ69 397 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 GGA2Q9UJY4 613 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms