RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 MAP1BP46821 2468 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 DSPP15924 2871 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 MAGEB17A8MXT2 336 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 TMEM114B3SHH9 223 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 C4orf51C9J302 202 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 AGPSO00116 658 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 FOXE1O00358 373 aaPredicted RBP5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 GSTA4O15217 222 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 ERI3O43414 337 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 CHST10O43529 356 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 TRIM13O60858 407 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 OR4F21O95013 312 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 MLYCDO95822 493 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 ITGB2P05107 769 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 APEHP13798 732 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 CHN1P15882 459 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 MMP11P24347 488 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 PTX3P26022 381 aaPredicted RBP5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 FOLR3P41439 243 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 ETV4P43268 484 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 TMED10P49755 219 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 PLA2G16P53816 162 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 SKP1P63208 163 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 RPP30P78346 268 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 BTN3A2P78410 334 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 C17orf67Q0P5P2 114 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 CDC20Q12834 499 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 IL10RAQ13651 578 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 RAPSNQ13702 412 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 PCLAFQ15004 111 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 POU4F3Q15319 338 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 SGCAQ16586 387 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 AANATQ16613 207 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 TBR1Q16650 682 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 TMEM35AQ53FP2 167 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 TOR2AQ5JU69 321 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 ATP1A1-AS1Q5TC04 95 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 LIPMQ5VYY2 423 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 FRG2Q64ET8 278 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 LETMD1Q6P1Q0 360 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 PAPD4Q6PIY7 484 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 FRMD7Q6ZUT3 714 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 MED25Q71SY5 747 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 UBE3DQ7Z6J8 389 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 C10orf107Q8IVU9 208 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 LINC00528Q8N1L1 170 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 RNF175Q8N4F7 328 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 SRFBP1Q8NEF9 429 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 ZNF680Q8NEM1 530 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 OR10Z1Q8NGY1 313 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 FANK1Q8TC84 345 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 TTC9Q92623 222 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 REPS1Q96D71 796 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 MTFMTQ96DP5 389 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 CMTM7Q96FZ5 175 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 FAR2Q96K12 515 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 QRFPRQ96P65 431 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 IP6K3Q96PC2 410 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 FAM111AQ96PZ2 611 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 FRG2BQ96QU4 278 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 F2RL3Q96RI0 385 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 ZNF382Q96SR6 550 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 CDRT15Q96T59 188 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 MTERF1Q99551 399 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 CCDC28BQ9BUN5 200 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 NPLQ9BXD5 320 aaPredicted RBP5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 GSTO2Q9H4Y5 243 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 CNTD2Q9H8S5 307 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 TMBIM4Q9HC24 238 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 SSU72Q9NP77 194 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 MID2Q9UJV3 735 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 HIF3AQ9Y2N7 669 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 DMRT1Q9Y5R6 373 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 CACNG2Q9Y698 323 aa5.89□□□□□ -1.47
ATPAF1-209ENST00000529214 MGAQ8IWI9 3026 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 ANKRD11Q6UB99 2663 aaPredicted RBP5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 A0A088AWK7 358 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 A0A0G2JN53 185 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 CDC14CA4D256 554 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 PGPEP1LA6NFU8 196 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 ZNF860A6NHJ4 632 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 IDSB3KWA1 339 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 HSBP1L1C9JCN9 74 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 H3BQF6 201 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 H3BUI4 141 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 UBFD1O14562 309 aaKnown RBP5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 FFAR3O14843 346 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 GPR42O15529 346 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 SSX5O60225 188 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 RDH16O75452 317 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 JRKO75564 520 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 ESRRBO95718 433 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 IGHEP01854 428 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 UBTFL6P0CB48 400 aaPredicted RBP5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 HSMCR30P0CW71 290 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 ANPEPP15144 967 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 ZNF10P21506 573 aaPredicted RBP5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 TRHRP34981 398 aaPredicted RBP5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 ARL1P40616 181 aaPredicted RBP5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 XCR1P46094 333 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms