RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 NRGNQ92686 78 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 PHF21BQ96EK2 531 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 C14orf79Q96F83 325 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 NSL1Q96IY1 281 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 SLC45A3Q96JT2 553 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 RASL10BQ96S79 203 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 UBAC1Q9BSL1 405 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 PLA2G12AQ9BZM1 189 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 ATG10Q9H0Y0 220 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 CXXC4Q9H2H0 198 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 RNF121Q9H920 327 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 FGF21Q9NSA1 209 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 SLC38A7Q9NVC3 462 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 ASF1BQ9NVP2 202 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 NINJ2Q9NZG7 142 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 UXTQ9UBK9 157 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 SH3BGRL2Q9UJC5 107 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 KMT2CQ8NEZ4 4911 aaKnown RBP4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 PTPRJQ12913 1337 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 IGKV6-21A0A0C4DH24 114 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 A0A1W2PPI3 338 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 ZSCAN5CA6NGD5 496 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 ANKRD61A6NGH8 418 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 SERINC4A6NH21 518 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 C2orf81A6NN90 581 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 NEDD8-MDP1E9PL57 170 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 CASC3O15234 703 aaKnown RBP4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 NEBLO76041 1014 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 PIGNO95427 931 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 GUCA1CO95843 209 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 CALM1P0DP23 149 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 CALM2P0DP24 149 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 CALM3P0DP25 149 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 FCGR1AP12314 374 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 SCP2P22307 547 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 SFTPDP35247 375 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 ETV5P41161 510 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 NUMBP49757 651 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 SSTP61278 116 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 ISL1P61371 349 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 TUBA1BP68363 451 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 MBTD1Q05BQ5 628 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 DLG1Q12959 904 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 KIR2DS3Q14952 304 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 SDHAF4Q5VUM1 108 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 FAM166AQ6J272 317 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 SERPINA12Q8IW75 414 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 CDK20Q8IZL9 346 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 IQCKQ8N0W5 287 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 KBTBD3Q8NAB2 608 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 NEXN-AS1Q8NBZ9 246 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 SPATA22Q8NHS9 363 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 FGFBP3Q8TAT2 258 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 LRRC15Q8TF66 581 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 PHLDA1Q8WV24 401 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 STARD8Q92502 1023 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 ULK4Q96C45 1275 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 LINGO1Q96FE5 620 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 ZNF560Q96MR9 790 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 XPO6Q96QU8 1125 aaKnown RBP4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 RANBP9Q96S59 729 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 MAP3K3Q99759 626 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 CCDC3Q9BQI4 270 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 URM1Q9BTM9 101 aaKnown RBP4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 PITPNM3Q9BZ71 974 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 TSPY26PQ9H489 355 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 RNF41Q9H4P4 317 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 SGK2Q9HBY8 427 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 NOCTQ9UK39 431 aaKnown RBP4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 MAN1B1Q9UKM7 699 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 BLOC1S6Q9UL45 172 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 PCDHA7Q9UN72 937 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 AURKCQ9UQB9 309 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 NCKAP1Q9Y2A7 1128 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 ZNF510Q9Y2H8 683 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 TMED3Q9Y3Q3 217 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 TEX264Q9Y6I9 313 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 AP1M2Q9Y6Q5 423 aa4.25□□□□□ -1.73
HMGB1P23-201ENST00000518743 NEDD4P46934 1319 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 A0A087X0K7 114 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 A0A0A6YYC8 382 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 A0A1B0GUH1 482 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 C2orf92A0A1B0GVN3 265 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 I3L1I5 382 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 INPP4BO15327 924 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 DPM1O60762 260 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 OAZ2O95190 189 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 MT-ATP6P00846 226 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 CRYABP02511 175 aaKnown RBP4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 SLC4A1P02730 911 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 APOHP02749 345 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 HEXBP07686 556 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 ACP2P11117 423 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 CDH3P22223 829 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 CA6P23280 308 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 JAK1P23458 1154 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 SFNP31947 248 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 UGT1A3P35503 534 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 ADARP55265 1226 aaKnown RBP4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 MAZP56270 477 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms