RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 CDKN1AP38936 164 aa11.31□□□□□ -0.6
DDX41-215ENST00000512431 XKP51811 444 aa11.31□□□□□ -0.6
DDX41-215ENST00000512431 ATP6V0D1P61421 351 aa11.31□□□□□ -0.6
DDX41-215ENST00000512431 MGAT5Q09328 741 aa11.31□□□□□ -0.6
DDX41-215ENST00000512431 ILF2Q12905 390 aaKnown RBP11.31□□□□□ -0.6
DDX41-215ENST00000512431 PPP1R7Q15435 360 aa11.31□□□□□ -0.6
DDX41-215ENST00000512431 MSS51Q4VC12 460 aa11.31□□□□□ -0.6
DDX41-215ENST00000512431 HP1BP3Q5SSJ5 553 aaPredicted RBP11.31□□□□□ -0.6
DDX41-215ENST00000512431 C6orf52Q5T4I8 152 aa11.31□□□□□ -0.6
DDX41-215ENST00000512431 MRM1Q6IN84 353 aaKnown RBP11.31□□□□□ -0.6
DDX41-215ENST00000512431 GRHL2Q6ISB3 625 aa11.31□□□□□ -0.6
DDX41-215ENST00000512431 ADAM5Q6NVV9 412 aa11.31□□□□□ -0.6
DDX41-215ENST00000512431 TRMT10BQ6PF06 316 aaKnown RBP11.31□□□□□ -0.6
DDX41-215ENST00000512431 FAM214BQ7L5A3 538 aa11.31□□□□□ -0.6
DDX41-215ENST00000512431 MYLK4Q86YV6 388 aaPredicted RBP11.31□□□□□ -0.6
DDX41-215ENST00000512431 IGDCC3Q8IVU1 814 aa11.31□□□□□ -0.6
DDX41-215ENST00000512431 PDIK1LQ8N165 341 aa11.31□□□□□ -0.6
DDX41-215ENST00000512431 SPATA6LQ8N4H0 392 aa11.31□□□□□ -0.6
DDX41-215ENST00000512431 PDPRQ8NCN5 879 aa11.31□□□□□ -0.6
DDX41-215ENST00000512431 MTERF1Q99551 399 aaKnown RBP11.31□□□□□ -0.6
DDX41-215ENST00000512431 TACO1Q9BSH4 297 aaKnown RBP11.31□□□□□ -0.6
DDX41-215ENST00000512431 BRINP2Q9C0B6 783 aa11.31□□□□□ -0.6
DDX41-215ENST00000512431 STMN4Q9H169 189 aaPredicted RBP11.31□□□□□ -0.6
DDX41-215ENST00000512431 DDX31Q9H8H2 851 aaKnown RBP11.31□□□□□ -0.6
DDX41-215ENST00000512431 LRTM1Q9HBL6 345 aa11.31□□□□□ -0.6
DDX41-215ENST00000512431 EHD3Q9NZN3 535 aa11.31□□□□□ -0.6
DDX41-215ENST00000512431 OPTCQ9UBM4 332 aa11.31□□□□□ -0.6
DDX41-215ENST00000512431 FBXL2Q9UKC9 423 aa11.31□□□□□ -0.6
DDX41-215ENST00000512431 LIPT1Q9Y234 373 aa11.31□□□□□ -0.6
DDX41-215ENST00000512431 EMC9Q9Y3B6 208 aa11.31□□□□□ -0.6
DDX41-215ENST00000512431 ZNF175Q9Y473 711 aa11.31□□□□□ -0.6
DDX41-215ENST00000512431 PCDHGA11Q9Y5H2 935 aa11.31□□□□□ -0.6
DDX41-215ENST00000512431 SONP18583 2426 aaKnown RBP11.31□□□□□ -0.6
DDX41-215ENST00000512431 MED12LQ86YW9 2145 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 A0A0A6YYD5 115 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 A0A1W2PP18 115 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 OR6C70A6NIJ9 312 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 TMPRSS11DO60235 418 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 DLX3O60479 287 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 ZIC3O60481 467 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 EEDO75530 441 aaKnown RBP11.3□□□□□ -0.6
DDX41-215ENST00000512431 REM1O75628 298 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 PLGP00747 810 aaPredicted RBP11.3□□□□□ -0.6
DDX41-215ENST00000512431 FCGR2AP12318 317 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 PORP16435 677 aaPredicted RBP11.3□□□□□ -0.6
DDX41-215ENST00000512431 DRD5P21918 477 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 THBS2P35442 1172 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 KRT20P35900 424 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 ELK3P41970 407 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 DSCR4P56555 118 aaPredicted RBP11.3□□□□□ -0.6
DDX41-215ENST00000512431 RPS3AP61247 264 aaKnown RBP11.3□□□□□ -0.6
DDX41-215ENST00000512431 RUNX1T1Q06455 604 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 PON3Q15166 354 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 SGCBQ16585 318 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 OR5M10Q6IEU7 315 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 ALKBH2Q6NS38 261 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 NUDT13Q86X67 352 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 RNF175Q8N4F7 328 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 TRIM58Q8NG06 486 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 OR4K17Q8NGC6 315 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 FNDC9Q8TBE3 224 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 SMAP2Q8WU79 429 aaPredicted RBP11.3□□□□□ -0.6
DDX41-215ENST00000512431 EXT2Q93063 718 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 GFM2Q969S9 779 aaKnown RBP11.3□□□□□ -0.6
DDX41-215ENST00000512431 TSPAN17Q96FV3 270 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 COL21A1Q96P44 957 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 NAP1L3Q99457 506 aaPredicted RBP11.3□□□□□ -0.6
DDX41-215ENST00000512431 ITPAQ9BY32 194 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 PRRG4Q9BZD6 226 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 SHARPINQ9H0F6 387 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 ALG2Q9H553 416 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 PLSCR4Q9NRQ2 329 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 TMEM160Q9NX00 188 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 NSMCE4AQ9NXX6 385 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 ASIC3Q9UHC3 531 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 CHMP2BQ9UQN3 213 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 DTX4Q9Y2E6 619 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 RNF115Q9Y4L5 304 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 PSAT1Q9Y617 370 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 HEATR5AQ86XA9 2040 aa11.3□□□□□ -0.6
DDX41-215ENST00000512431 A0A1W2PS29 197 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 GOLGA6L10A6NI86 522 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 LINC01387J3KSC0 135 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 K7EPI3 171 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 DNALI1O14645 258 aaPredicted RBP11.29□□□□□ -0.6
DDX41-215ENST00000512431 CLOCKO15516 846 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 SEC14L5O43304 696 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 SOD3P08294 240 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 CPMP14384 443 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 CD1DP15813 335 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 GRK2P25098 689 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 BSGP35613 385 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 DEKP35659 375 aaKnown RBP11.29□□□□□ -0.6
DDX41-215ENST00000512431 PPICP45877 212 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 CTBP2P56545 445 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 POU4F1Q01851 419 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 CUL3Q13618 768 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 SLMAPQ14BN4 828 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 OR4D1Q15615 310 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 CYP1B1Q16678 543 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms