RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 CTRCQ99895 268 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 APMAPQ9HDC9 416 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 DDX18Q9NVP1 670 aaKnown RBP14.15□□□□□ -0.14
SCAF11-204ENST00000395454 P2RX2Q9UBL9 471 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 KCND3Q9UK17 655 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 RARRES3Q9UL19 164 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 CCDC187A0A096LP49 1063 aa14.14□□□□□ -0.15
SCAF11-204ENST00000395454 PLD2O14939 933 aa14.14□□□□□ -0.15
SCAF11-204ENST00000395454 B3GALT2O43825 422 aa14.14□□□□□ -0.15
SCAF11-204ENST00000395454 HS6ST1O60243 411 aa14.14□□□□□ -0.15
SCAF11-204ENST00000395454 DIRAS1O95057 198 aa14.14□□□□□ -0.15
SCAF11-204ENST00000395454 BCHEP06276 602 aa14.14□□□□□ -0.15
SCAF11-204ENST00000395454 PRKACGP22612 351 aa14.14□□□□□ -0.15
SCAF11-204ENST00000395454 GPC1P35052 558 aa14.14□□□□□ -0.15
SCAF11-204ENST00000395454 DAPP51397 102 aa14.14□□□□□ -0.15
SCAF11-204ENST00000395454 PRR5P85299 388 aa14.14□□□□□ -0.15
SCAF11-204ENST00000395454 RUNX2Q13950 521 aa14.14□□□□□ -0.15
SCAF11-204ENST00000395454 ZIK1Q3SY52 487 aaPredicted RBP14.14□□□□□ -0.15
SCAF11-204ENST00000395454 TCTE1Q5JU00 501 aa14.14□□□□□ -0.15
SCAF11-204ENST00000395454 TMPRSS7Q7RTY8 843 aa14.14□□□□□ -0.15
SCAF11-204ENST00000395454 DGLUCYQ7Z3D6 616 aa14.14□□□□□ -0.15
SCAF11-204ENST00000395454 PPP1R3BQ86XI6 285 aa14.14□□□□□ -0.15
SCAF11-204ENST00000395454 LGI4Q8N135 537 aa14.14□□□□□ -0.15
SCAF11-204ENST00000395454 SPPL2AQ8TCT8 520 aa14.14□□□□□ -0.15
SCAF11-204ENST00000395454 RASSF5Q8WWW0 418 aa14.14□□□□□ -0.15
SCAF11-204ENST00000395454 ELP4Q96EB1 424 aa14.14□□□□□ -0.15
SCAF11-204ENST00000395454 SPRTNQ9H040 489 aaPredicted RBP14.14□□□□□ -0.15
SCAF11-204ENST00000395454 PISDQ9UG56 409 aa14.14□□□□□ -0.15
SCAF11-204ENST00000395454 SATB2Q9UPW6 733 aa14.14□□□□□ -0.15
SCAF11-204ENST00000395454 ZNF780BQ9Y6R6 833 aa14.14□□□□□ -0.15
SCAF11-204ENST00000395454 ENPP4Q9Y6X5 453 aa14.14□□□□□ -0.15
SCAF11-204ENST00000395454 PMS2P1A4D2B8 440 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 EMC8O43402 210 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 ERAL1O75616 437 aaKnown RBP14.13□□□□□ -0.15
SCAF11-204ENST00000395454 MAN2A2P49641 1150 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 MAPK10P53779 464 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 KEAP1Q14145 624 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 DEFB134Q4QY38 66 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 PRAMEF17Q5VTA0 474 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 ISLR2Q6UXK2 745 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 THAP5Q7Z6K1 395 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 ZNF786Q8N393 782 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 ZNF555Q8NEP9 628 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 WDR36Q8NI36 951 aaKnown RBP14.13□□□□□ -0.15
SCAF11-204ENST00000395454 RNF31Q96EP0 1072 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 TREX2Q9BQ50 279 aaPredicted RBP14.13□□□□□ -0.15
SCAF11-204ENST00000395454 NPLQ9BXD5 320 aaPredicted RBP14.13□□□□□ -0.15
SCAF11-204ENST00000395454 RSPO3Q9BXY4 272 aaPredicted RBP14.13□□□□□ -0.15
SCAF11-204ENST00000395454 GRIP2Q9C0E4 1043 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 RBM38Q9H0Z9 239 aaKnown RBP14.13□□□□□ -0.15
SCAF11-204ENST00000395454 OR51I1Q9H343 314 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 SLC39A1Q9NY26 324 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 ORC6Q9Y5N6 252 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 GPC6Q9Y625 555 aaPredicted RBP14.13□□□□□ -0.15
SCAF11-204ENST00000395454 HSPE1-MOB4S4R3N1 261 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 SEC16AO15027 2179 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 LOC100130705A0A1B0GUX0 176 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 A0A1W2PS29 197 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 ARRDC5A6NEK1 342 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 C5orf58C9J3I9 102 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 GALR3O60755 368 aaPredicted RBP14.13□□□□□ -0.15
SCAF11-204ENST00000395454 ETS2P15036 469 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 RRM2P31350 389 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 RYKP34925 604 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 MC2RQ01718 297 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 FUT5Q11128 374 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 IL11RAQ14626 422 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 GRM7Q14831 915 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 DUSP7Q16829 419 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 NADK2Q4G0N4 442 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 ZNF691Q5VV52 312 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 SATL1Q86VE3 508 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 CCDC116Q8IYX3 515 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 C8orf59Q8N0T1 100 aaPredicted RBP14.13□□□□□ -0.15
SCAF11-204ENST00000395454 CACTIN-AS1Q8N1I8 211 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 GPR32P1Q8NGA4 272 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 ZCCHC10Q8TBK6 192 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 RAB8BQ92930 207 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 GIMAP5Q96F15 307 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 ZNF285Q96NJ3 590 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 BTBD2Q9BX70 525 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 SLC7A5P2Q9GIP4 190 aa14.13□□□□□ -0.15
SCAF11-204ENST00000395454 PDP1Q9P0J1 537 aaPredicted RBP14.13□□□□□ -0.15
SCAF11-204ENST00000395454 MRPS2Q9Y399 296 aaKnown RBP14.13□□□□□ -0.15
SCAF11-204ENST00000395454 NINQ8N4C6 2090 aa14.12□□□□□ -0.15
SCAF11-204ENST00000395454 A0A087WXM4 84 aa14.12□□□□□ -0.15
SCAF11-204ENST00000395454 A0A1W2PNU3 283 aaPredicted RBP14.12□□□□□ -0.15
SCAF11-204ENST00000395454 B4E171 279 aa14.12□□□□□ -0.15
SCAF11-204ENST00000395454 H3BMH7 237 aa14.12□□□□□ -0.15
SCAF11-204ENST00000395454 HMGN2P05204 90 aaKnown RBP14.12□□□□□ -0.15
SCAF11-204ENST00000395454 RHCEP18577 417 aa14.12□□□□□ -0.15
SCAF11-204ENST00000395454 MATN1P21941 496 aa14.12□□□□□ -0.15
SCAF11-204ENST00000395454 CPN2P22792 545 aa14.12□□□□□ -0.15
SCAF11-204ENST00000395454 ETV5P41161 510 aa14.12□□□□□ -0.15
SCAF11-204ENST00000395454 TSPAN7P41732 249 aa14.12□□□□□ -0.15
SCAF11-204ENST00000395454 ID4P47928 161 aa14.12□□□□□ -0.15
SCAF11-204ENST00000395454 KCNJ5P48544 419 aa14.12□□□□□ -0.15
SCAF11-204ENST00000395454 HLCSP50747 726 aa14.12□□□□□ -0.15
SCAF11-204ENST00000395454 ISL1P61371 349 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms