RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 MTG2Q9H4K7 406 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 PNO1Q9NRX1 252 aaKnown RBP16.5■□□□□ 0.23
PTPRU-202ENST00000373779 GRHPRQ9UBQ7 328 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 TOXO94900 526 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 SLC10A3P09131 477 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 SF3A2Q15428 464 aaKnown RBP16.5■□□□□ 0.23
PTPRU-202ENST00000373779 TMEM69Q5SWH9 247 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.5■□□□□ 0.234e-8■■■■■ 34.6
PTPRU-202ENST00000373779 RIMKLAQ8IXN7 391 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 SAMD8Q96LT4 415 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 NUDT15Q9NV35 164 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 METTL15A6NJ78 407 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 GASTP01350 101 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 GDI1P31150 447 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 LIPAP38571 399 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 SOX2P48431 317 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 RIPPLY1Q0D2K3 151 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 GALNTL5Q7Z4T8 443 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 COPZ2Q9P299 210 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 TRBV2A0A0J9YWF9 115 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 IGLON5A6NGN9 336 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 CASC3O15234 703 aaKnown RBP16.5■□□□□ 0.23
PTPRU-202ENST00000373779 RP2O75695 350 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 PDHA2P29803 388 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 LEXMQ3ZCV2 418 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 DEFB134Q4QY38 66 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 ATAD3CQ5T2N8 411 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 LRIF1Q5T3J3 769 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 NRARPQ7Z6K4 114 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 TMED4Q7Z7H5 227 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 LYSMD2Q8IV50 215 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 ACTRT3Q9BYD9 372 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 COL5A3P25940 1745 aaPredicted RBP16.49■□□□□ 0.23
PTPRU-202ENST00000373779 IDUAP35475 653 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 ARHGAP11AQ6P4F7 1023 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 PODNL1Q6PEZ8 512 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 TBL1XR1Q9BZK7 514 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 THSD1Q9NS62 852 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 C1orf105O95561 183 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 ADRB3P13945 408 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 GPX2P18283 190 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 POLR2CP19387 275 aaPredicted RBP16.49■□□□□ 0.23
PTPRU-202ENST00000373779 PRLHRP49683 370 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 OXA1LQ15070 435 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 BCL2L14Q9BZR8 327 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 SLC6A15Q9H2J7 730 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 HCSTQ9UBK5 93 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 ZNF639Q9UID6 485 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 ASB1Q9Y576 335 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 SOX30O94993 753 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 PRLP01236 227 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 FCER2P06734 321 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 RAB28P51157 221 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 SLC35A2P78381 396 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 DECR1Q16698 335 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 CPOQ8IVL8 374 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 TRMT10AQ8TBZ6 339 aaKnown RBP16.49■□□□□ 0.23
PTPRU-202ENST00000373779 PMEPA1Q969W9 287 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 SGIP1Q9BQI5 828 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 SAP130Q9H0E3 1048 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 TAS2R16Q9NYV7 291 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 ADAMTSL1Q8N6G6 1762 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 TRBV4-1A0A0J9YWV2 114 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 LRRTM2O43300 516 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 KLK8O60259 260 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 KLKB1P03952 638 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 KLHL26Q53HC5 615 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 SPATC1Q76KD6 591 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 HORMAD2Q8N7B1 307 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 PHOSPHO1Q8TCT1 267 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 CLSTN3Q9BQT9 956 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 ALG8Q9BVK2 526 aa16.49■□□□□ 0.23
PTPRU-202ENST00000373779 MTHFD2LQ9H903 347 aaPredicted RBP16.49■□□□□ 0.23
PTPRU-202ENST00000373779 B4GALT2O60909 372 aa16.48■□□□□ 0.23
PTPRU-202ENST00000373779 CYP17A1P05093 508 aa16.48■□□□□ 0.23
PTPRU-202ENST00000373779 DBIP07108 87 aaKnown RBP16.48■□□□□ 0.23
PTPRU-202ENST00000373779 PITPNBP48739 271 aa16.48■□□□□ 0.23
PTPRU-202ENST00000373779 PYHIN1Q6K0P9 492 aa16.48■□□□□ 0.23
PTPRU-202ENST00000373779 DUS1LQ6P1R4 473 aaKnown RBP16.48■□□□□ 0.23
PTPRU-202ENST00000373779 PRSS58Q8IYP2 241 aa16.48■□□□□ 0.23
PTPRU-202ENST00000373779 JAGN1Q8N5M9 183 aa16.48■□□□□ 0.23
PTPRU-202ENST00000373779 NSMAFQ92636 917 aa16.48■□□□□ 0.23
PTPRU-202ENST00000373779 MGAT4CQ9UBM8 478 aa16.48■□□□□ 0.23
PTPRU-202ENST00000373779 MGAT4AQ9UM21 535 aa16.48■□□□□ 0.23
PTPRU-202ENST00000373779 TEX13CA0A0J9YWL9 993 aa16.48■□□□□ 0.23
PTPRU-202ENST00000373779 ZNF432O94892 652 aa16.48■□□□□ 0.23
PTPRU-202ENST00000373779 SPRYD4Q8WW59 207 aaPredicted RBP16.48■□□□□ 0.23
PTPRU-202ENST00000373779 THRSPQ92748 146 aa16.48■□□□□ 0.23
PTPRU-202ENST00000373779 CNN2Q99439 309 aaKnown RBP16.48■□□□□ 0.23
PTPRU-202ENST00000373779 CD93Q9NPY3 652 aa16.48■□□□□ 0.23
PTPRU-202ENST00000373779 MLXQ9UH92 298 aa16.48■□□□□ 0.23
PTPRU-202ENST00000373779 PCDHGB2Q9Y5G2 931 aa16.48■□□□□ 0.23
PTPRU-202ENST00000373779 TRAPPC13A5PLN9 417 aa16.48■□□□□ 0.23
PTPRU-202ENST00000373779 SYN1P17600 705 aa16.48■□□□□ 0.23
PTPRU-202ENST00000373779 FAAH2Q6GMR7 532 aa16.48■□□□□ 0.23
PTPRU-202ENST00000373779 MEX3DQ86XN8 651 aaKnown RBP16.48■□□□□ 0.23
PTPRU-202ENST00000373779 CADM3Q8N126 398 aa16.48■□□□□ 0.23
PTPRU-202ENST00000373779 OR2M4Q96R27 311 aa16.48■□□□□ 0.23
PTPRU-202ENST00000373779 KRT33AO76009 404 aa16.48■□□□□ 0.23
PTPRU-202ENST00000373779 ITGA3P26006 1051 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms