RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 LRIT3Q3SXY7 679 aa16.98■□□□□ 0.31
CD40-201ENST00000372276 EIPR1Q53HC9 387 aa16.98■□□□□ 0.31
CD40-201ENST00000372276 MANEAQ5SRI9 462 aa16.98■□□□□ 0.31
CD40-201ENST00000372276 HEPHL1Q6MZM0 1159 aa16.98■□□□□ 0.31
CD40-201ENST00000372276 SLC27A4Q6P1M0 643 aa16.98■□□□□ 0.31
CD40-201ENST00000372276 TMEM107Q6UX40 140 aa16.98■□□□□ 0.31
CD40-201ENST00000372276 SLC36A4Q6YBV0 504 aa16.98■□□□□ 0.31
CD40-201ENST00000372276 BTLAQ7Z6A9 289 aa16.98■□□□□ 0.31
CD40-201ENST00000372276 IQCHQ86VS3 1027 aa16.98■□□□□ 0.31
CD40-201ENST00000372276 NLGN4XQ8N0W4 816 aa16.98■□□□□ 0.31
CD40-201ENST00000372276 LRRC25Q8N386 305 aaPredicted RBP16.98■□□□□ 0.31
CD40-201ENST00000372276 CAMKVQ8NCB2 501 aa16.98■□□□□ 0.31
CD40-201ENST00000372276 ST13P5Q8NFI4 369 aaPredicted RBP16.98■□□□□ 0.31
CD40-201ENST00000372276 PIGXQ8TBF5 258 aa16.98■□□□□ 0.31
CD40-201ENST00000372276 OSTF1Q92882 214 aa16.98■□□□□ 0.31
CD40-201ENST00000372276 ERLEC1Q96DZ1 483 aa16.98■□□□□ 0.31
CD40-201ENST00000372276 RIPOR3Q96MK2 946 aa16.98■□□□□ 0.31
CD40-201ENST00000372276 OPALINQ96PE5 141 aa16.98■□□□□ 0.31
CD40-201ENST00000372276 MS4A4EQ96PG1 132 aa16.98■□□□□ 0.31
CD40-201ENST00000372276 OR5M11Q96RB7 305 aa16.98■□□□□ 0.31
CD40-201ENST00000372276 NEURL2Q9BR09 285 aa16.98■□□□□ 0.31
CD40-201ENST00000372276 CENPOQ9BU64 300 aa16.98■□□□□ 0.31
CD40-201ENST00000372276 CCDC32Q9BV29 185 aa16.98■□□□□ 0.31
CD40-201ENST00000372276 TWSG1Q9GZX9 223 aa16.98■□□□□ 0.31
CD40-201ENST00000372276 MKRN2Q9H000 416 aaKnown RBP16.98■□□□□ 0.31
CD40-201ENST00000372276 FGF22Q9HCT0 170 aa16.98■□□□□ 0.31
CD40-201ENST00000372276 FGF20Q9NP95 211 aaPredicted RBP16.98■□□□□ 0.31
CD40-201ENST00000372276 MAN2C1Q9NTJ4 1040 aa16.98■□□□□ 0.31
CD40-201ENST00000372276 MED17Q9NVC6 651 aa16.98■□□□□ 0.31
CD40-201ENST00000372276 SPHK1Q9NYA1 384 aa16.98■□□□□ 0.31
CD40-201ENST00000372276 SSR3Q9UNL2 185 aa16.98■□□□□ 0.31
CD40-201ENST00000372276 PLEKHM1Q9Y4G2 1056 aa16.98■□□□□ 0.31
CD40-201ENST00000372276 PRR23AA6NEV1 266 aa16.97■□□□□ 0.31
CD40-201ENST00000372276 GLOD5A6NK44 160 aa16.97■□□□□ 0.31
CD40-201ENST00000372276 PPM1DO15297 605 aa16.97■□□□□ 0.31
CD40-201ENST00000372276 PRODHO43272 600 aa16.97■□□□□ 0.31
CD40-201ENST00000372276 OR5F1O95221 314 aa16.97■□□□□ 0.31
CD40-201ENST00000372276 SOX14O95416 240 aa16.97■□□□□ 0.31
CD40-201ENST00000372276 CCNYL3P0C7X3 344 aa16.97■□□□□ 0.31
CD40-201ENST00000372276 HOXB2P14652 356 aa16.97■□□□□ 0.31
CD40-201ENST00000372276 MYL12AP19105 171 aa16.97■□□□□ 0.31
CD40-201ENST00000372276 FEN1P39748 380 aaKnown RBP16.97■□□□□ 0.31
CD40-201ENST00000372276 SEC13P55735 322 aa16.97■□□□□ 0.31
CD40-201ENST00000372276 YPEL5P62699 121 aa16.97■□□□□ 0.31
CD40-201ENST00000372276 TNFRSF17Q02223 184 aa16.97■□□□□ 0.31
CD40-201ENST00000372276 FUT5Q11128 374 aa16.97■□□□□ 0.31
CD40-201ENST00000372276 DECR1Q16698 335 aa16.97■□□□□ 0.31
CD40-201ENST00000372276 TMEM196Q5HYL7 178 aa16.97■□□□□ 0.31
CD40-201ENST00000372276 CDC73Q6P1J9 531 aa16.97■□□□□ 0.31
CD40-201ENST00000372276 PARM1Q6UWI2 310 aa16.97■□□□□ 0.31
CD40-201ENST00000372276 RBM12BQ8IXT5 1001 aaKnown RBP16.97■□□□□ 0.31
CD40-201ENST00000372276 OR4K14Q8NGD5 310 aa16.97■□□□□ 0.31
CD40-201ENST00000372276 TMEM163Q8TC26 289 aa16.97■□□□□ 0.31
CD40-201ENST00000372276 UCN3Q969E3 161 aa16.97■□□□□ 0.31
CD40-201ENST00000372276 RFKQ969G6 155 aa16.97■□□□□ 0.31
CD40-201ENST00000372276 MRPL38Q96DV4 380 aaKnown RBP16.97■□□□□ 0.31
CD40-201ENST00000372276 TM4SF19Q96DZ7 209 aa16.97■□□□□ 0.31
CD40-201ENST00000372276 RSPO3Q9BXY4 272 aaPredicted RBP16.97■□□□□ 0.31
CD40-201ENST00000372276 SLC38A1Q9H2H9 487 aa16.97■□□□□ 0.31
CD40-201ENST00000372276 NDUFB11Q9NX14 153 aa16.97■□□□□ 0.31
CD40-201ENST00000372276 DNAJC27Q9NZQ0 273 aa16.97■□□□□ 0.31
CD40-201ENST00000372276 EXOSC1Q9Y3B2 195 aaKnown RBP16.97■□□□□ 0.31
CD40-201ENST00000372276 ENTPD2Q9Y5L3 495 aa16.97■□□□□ 0.31
CD40-201ENST00000372276 SPACA6W5XKT8 324 aa16.97■□□□□ 0.31
CD40-201ENST00000372276 FAM221BA6H8Z2 402 aa16.96■□□□□ 0.31
CD40-201ENST00000372276 FAM227AF5H4B4 570 aa16.96■□□□□ 0.31
CD40-201ENST00000372276 M0R129 80 aa16.96■□□□□ 0.31
CD40-201ENST00000372276 SLC31A1O15431 190 aa16.96■□□□□ 0.31
CD40-201ENST00000372276 LATO43561 262 aa16.96■□□□□ 0.31
CD40-201ENST00000372276 TLX2O43763 284 aaPredicted RBP16.96■□□□□ 0.31
CD40-201ENST00000372276 IMPDH2P12268 514 aa16.96■□□□□ 0.31
CD40-201ENST00000372276 GRK5P34947 590 aa16.96■□□□□ 0.31
CD40-201ENST00000372276 RORCP51449 518 aa16.96■□□□□ 0.31
CD40-201ENST00000372276 RPS3AP61247 264 aaKnown RBP16.96■□□□□ 0.31
CD40-201ENST00000372276 MRPS21P82921 87 aaKnown RBP16.96■□□□□ 0.31
CD40-201ENST00000372276 IFITM3Q01628 133 aa16.96■□□□□ 0.31
CD40-201ENST00000372276 RUNX1T1Q06455 604 aa16.96■□□□□ 0.31
CD40-201ENST00000372276 LARS2Q15031 903 aaKnown RBP16.96■□□□□ 0.31
CD40-201ENST00000372276 SNAPC1Q16533 368 aa16.96■□□□□ 0.31
CD40-201ENST00000372276 C18orf63Q68DL7 685 aa16.96■□□□□ 0.31
CD40-201ENST00000372276 ABHD13Q7L211 337 aa16.96■□□□□ 0.31
CD40-201ENST00000372276 LYSMD2Q8IV50 215 aa16.96■□□□□ 0.31
CD40-201ENST00000372276 ZNF655Q8N720 491 aaPredicted RBP16.96■□□□□ 0.31
CD40-201ENST00000372276 OR4E2Q8NGC2 313 aa16.96■□□□□ 0.31
CD40-201ENST00000372276 RSC1A1Q92681 617 aa16.96■□□□□ 0.31
CD40-201ENST00000372276 SIPA1Q96FS4 1042 aa16.96■□□□□ 0.31
CD40-201ENST00000372276 CEP19Q96LK0 163 aa16.96■□□□□ 0.31
CD40-201ENST00000372276 HHATLQ9HCP6 504 aa16.96■□□□□ 0.31
CD40-201ENST00000372276 TRNAU1APQ9NX07 287 aaKnown RBP16.96■□□□□ 0.31
CD40-201ENST00000372276 NLGN3Q9NZ94 848 aa16.96■□□□□ 0.31
CD40-201ENST00000372276 TESQ9UGI8 421 aaKnown RBP16.96■□□□□ 0.31
CD40-201ENST00000372276 SLC6A14Q9UN76 642 aa16.96■□□□□ 0.31
CD40-201ENST00000372276 LAMA3Q16787 3333 aa16.96■□□□□ 0.31
CD40-201ENST00000372276 TMEM129A0AVI4 362 aa16.96■□□□□ 0.3
CD40-201ENST00000372276 B3GALT2O43825 422 aa16.96■□□□□ 0.3
CD40-201ENST00000372276 CSO75390 466 aaKnown RBP16.96■□□□□ 0.3
CD40-201ENST00000372276 SMIM10L1P0DMW3 83 aa16.96■□□□□ 0.3
CD40-201ENST00000372276 ACP2P11117 423 aa16.96■□□□□ 0.3
CD40-201ENST00000372276 FUT4P22083 530 aa16.96■□□□□ 0.3
CD40-201ENST00000372276 CPN2P22792 545 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms