RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 KIAA1161Q6NSJ0 714 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 ZNF793Q6ZN11 406 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 RASSF6Q6ZTQ3 369 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 ARIH2OSQ8N7S6 290 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 POGLUT1Q8NBL1 392 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 ANKK1Q8NFD2 765 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 TEX47Q8TBZ9 253 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 GNPDA2Q8TDQ7 276 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 DIO2Q92813 273 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 C1GALT1C1Q96EU7 318 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 DMRTB1Q96MA1 342 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 CAMK1GQ96NX5 476 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 TM9SF2Q99805 663 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 COQ7Q99807 217 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 ARHGDIGQ99819 225 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 SAP130Q9H0E3 1048 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 EGLN3Q9H6Z9 239 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 SYNDIG1Q9H7V2 258 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 RNF121Q9H920 327 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 TMEM39AQ9NV64 488 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 LIPT1Q9Y234 373 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 GSTK1Q9Y2Q3 226 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 A0A0G2JN53 185 aa8.18□□□□□ -1.1
CLK1-201ENST00000321356 LINC00854A0A1B0GVQ3 168 aa8.18□□□□□ -1.1
CLK1-201ENST00000321356 WASHC1A8K0Z3 465 aa8.18□□□□□ -1.1
CLK1-201ENST00000321356 LRRTM2O43300 516 aa8.18□□□□□ -1.1
CLK1-201ENST00000321356 APOL3O95236 402 aa8.18□□□□□ -1.1
CLK1-201ENST00000321356 LALBAP00709 142 aa8.18□□□□□ -1.1
CLK1-201ENST00000321356 HMGN2P05204 90 aaKnown RBP8.18□□□□□ -1.1
CLK1-201ENST00000321356 FHP07954 510 aa8.18□□□□□ -1.1
CLK1-201ENST00000321356 CHRM5P08912 532 aaPredicted RBP8.18□□□□□ -1.1
CLK1-201ENST00000321356 PTBP1P26599 531 aaKnown RBP eCLIP8.18□□□□□ -1.1
CLK1-201ENST00000321356 NTSP30990 170 aa8.18□□□□□ -1.1
CLK1-201ENST00000321356 SSR2P43308 183 aa8.18□□□□□ -1.1
CLK1-201ENST00000321356 NCBP2P52298 156 aaKnown RBP eCLIP8.18□□□□□ -1.18e-8■□□□□ 9.9
CLK1-201ENST00000321356 HOXC5Q00444 222 aa8.18□□□□□ -1.1
CLK1-201ENST00000321356 ACSM1Q08AH1 577 aa8.18□□□□□ -1.1
CLK1-201ENST00000321356 ZNF155Q12901 538 aaPredicted RBP8.18□□□□□ -1.1
CLK1-201ENST00000321356 ZIC1Q15915 447 aa8.18□□□□□ -1.1
CLK1-201ENST00000321356 FNDC3BQ53EP0 1204 aaKnown RBP8.18□□□□□ -1.1
CLK1-201ENST00000321356 TMEM35AQ53FP2 167 aa8.18□□□□□ -1.1
CLK1-201ENST00000321356 PYDC2Q56P42 97 aa8.18□□□□□ -1.1
CLK1-201ENST00000321356 LCN1P1Q5VSP4 162 aa8.18□□□□□ -1.1
CLK1-201ENST00000321356 MRM1Q6IN84 353 aaKnown RBP8.18□□□□□ -1.1
CLK1-201ENST00000321356 METAP1DQ6UB28 335 aaPredicted RBP8.18□□□□□ -1.1
CLK1-201ENST00000321356 WASH2PQ6VEQ5 465 aa8.18□□□□□ -1.1
CLK1-201ENST00000321356 SZRD1Q7Z422 152 aa8.18□□□□□ -1.1
CLK1-201ENST00000321356 LRRTM4Q86VH4 590 aa8.18□□□□□ -1.1
CLK1-201ENST00000321356 LIX1LQ8IVB5 337 aa8.18□□□□□ -1.1
CLK1-201ENST00000321356 MRPL43Q8N983 215 aaKnown RBP8.18□□□□□ -1.1
CLK1-201ENST00000321356 GATAD2BQ8WXI9 593 aa8.18□□□□□ -1.1
CLK1-201ENST00000321356 SLC9A6Q92581 669 aa8.18□□□□□ -1.1
CLK1-201ENST00000321356 FRMD6Q96NE9 622 aa8.18□□□□□ -1.1
CLK1-201ENST00000321356 SLC38A2Q96QD8 506 aa8.18□□□□□ -1.1
CLK1-201ENST00000321356 C17orf62Q9BQA9 187 aa8.18□□□□□ -1.1
CLK1-201ENST00000321356 TMEM246Q9BRR3 403 aa8.18□□□□□ -1.1
CLK1-201ENST00000321356 ZNF649Q9BS31 505 aa8.18□□□□□ -1.1
CLK1-201ENST00000321356 FAIM2Q9BWQ8 316 aa8.18□□□□□ -1.1
CLK1-201ENST00000321356 ANKRD19PQ9H560 264 aa8.18□□□□□ -1.1
CLK1-201ENST00000321356 RANGRFQ9HD47 186 aaPredicted RBP8.18□□□□□ -1.1
CLK1-201ENST00000321356 TM7SF3Q9NS93 570 aa8.18□□□□□ -1.1
CLK1-201ENST00000321356 NDRG2Q9UN36 371 aaKnown RBP8.18□□□□□ -1.1
CLK1-201ENST00000321356 DNMT3AQ9Y6K1 912 aaPredicted RBP8.18□□□□□ -1.1
CLK1-201ENST00000321356 NUMA1Q14980 2115 aa8.18□□□□□ -1.1
CLK1-201ENST00000321356 FAM170BA6NMN3 283 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 C4orf51C9J302 202 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 FKTNO75072 461 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 TRIM3O75382 744 aaPredicted RBP8.17□□□□□ -1.1
CLK1-201ENST00000321356 PRKRAO75569 313 aaKnown RBP8.17□□□□□ -1.1
CLK1-201ENST00000321356 ADH1CP00326 375 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 MYCP01106 439 aaPredicted RBP8.17□□□□□ -1.1
CLK1-201ENST00000321356 IGHA1P01876 353 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 YES1P07947 543 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 FAM157BP0CG42 384 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 CSF2RAP15509 400 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 CEBPBP17676 345 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 CPN2P22792 545 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 ITGB8P26012 769 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 IFNGR2P38484 337 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 CD79BP40259 229 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 BUD31P41223 144 aaPredicted RBP8.17□□□□□ -1.1
CLK1-201ENST00000321356 SLC1A3P43003 542 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 OMPP47874 163 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 ARFIP1P53367 373 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 RACK1P63244 317 aaKnown RBP8.17□□□□□ -1.1
CLK1-201ENST00000321356 CDK3Q00526 305 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 DUSP2Q05923 314 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 PRDX1Q06830 199 aaKnown RBP8.17□□□□□ -1.1
CLK1-201ENST00000321356 LASP1Q14847 261 aaKnown RBP8.17□□□□□ -1.1
CLK1-201ENST00000321356 TRAM2Q15035 370 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 ARHGEF6Q15052 776 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 TMEM44Q2T9K0 475 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 GAB4Q2WGN9 574 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 YIF1BQ5BJH7 314 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 AADACL4Q5VUY2 407 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 BHLHB9Q6PI77 547 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 UTS2BQ765I0 119 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 PRICKLE2Q7Z3G6 844 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 HMGN2P46Q86SG4 172 aa8.17□□□□□ -1.1
CLK1-201ENST00000321356 NOXA1Q86UR1 476 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 523.2 ms