RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 ZCCHC3Q9NUD5 404 aaKnown RBP18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 GID8Q9NWU2 228 aa18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 SLC25A37Q9NYZ2 338 aa18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 GMEB1Q9Y692 573 aa18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 FAM208BQ5VWN6 2430 aa18.43■□□□□ 0.54
PDLIM2-221ENST00000622702 FXYD1O00168 92 aa18.43■□□□□ 0.54
PDLIM2-221ENST00000622702 EXOSC7Q15024 291 aaKnown RBP18.43■□□□□ 0.54
PDLIM2-221ENST00000622702 BTBD16Q32M84 506 aa18.43■□□□□ 0.54
PDLIM2-221ENST00000622702 RNF111Q6ZNA4 994 aa18.43■□□□□ 0.54
PDLIM2-221ENST00000622702 NUP43Q8NFH3 380 aa18.43■□□□□ 0.54
PDLIM2-221ENST00000622702 OR52R1Q8NGF1 315 aa18.43■□□□□ 0.54
PDLIM2-221ENST00000622702 ELP5Q8TE02 316 aa18.43■□□□□ 0.54
PDLIM2-221ENST00000622702 ZFP90Q8TF47 636 aa18.43■□□□□ 0.54
PDLIM2-221ENST00000622702 LRRC58Q96CX6 371 aa18.43■□□□□ 0.54
PDLIM2-221ENST00000622702 NEURL3Q96EH8 262 aa18.43■□□□□ 0.54
PDLIM2-221ENST00000622702 MAGED4Q96JG8 741 aa18.43■□□□□ 0.54
PDLIM2-221ENST00000622702 FER1L6-AS2Q96M78 137 aa18.43■□□□□ 0.54
PDLIM2-221ENST00000622702 MS4A4EQ96PG1 132 aa18.43■□□□□ 0.54
PDLIM2-221ENST00000622702 CGREF1Q99674 301 aa18.43■□□□□ 0.54
PDLIM2-221ENST00000622702 SLC35A5Q9BS91 424 aa18.43■□□□□ 0.54
PDLIM2-221ENST00000622702 MMP25Q9NPA2 562 aa18.43■□□□□ 0.54
PDLIM2-221ENST00000622702 VAPAQ9P0L0 249 aa18.43■□□□□ 0.54
PDLIM2-221ENST00000622702 ZNF223Q9UK11 482 aaPredicted RBP18.43■□□□□ 0.54
PDLIM2-221ENST00000622702 CACNA1GO43497 2377 aa18.43■□□□□ 0.54
PDLIM2-221ENST00000622702 BOD1L1Q8NFC6 3051 aa18.42■□□□□ 0.54
PDLIM2-221ENST00000622702 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.42■□□□□ 0.54
PDLIM2-221ENST00000622702 OR6C76A6NM76 312 aa18.42■□□□□ 0.54
PDLIM2-221ENST00000622702 FAM87AP0C7U9 286 aa18.42■□□□□ 0.54
PDLIM2-221ENST00000622702 CPA2P48052 419 aa18.42■□□□□ 0.54
PDLIM2-221ENST00000622702 EMDP50402 254 aa18.42■□□□□ 0.54
PDLIM2-221ENST00000622702 POLE2P56282 527 aa18.42■□□□□ 0.54
PDLIM2-221ENST00000622702 CHAF1BQ13112 559 aa18.42■□□□□ 0.54
PDLIM2-221ENST00000622702 DCAF10Q5QP82 559 aa18.42■□□□□ 0.54
PDLIM2-221ENST00000622702 SAXO2Q658L1 398 aa18.42■□□□□ 0.54
PDLIM2-221ENST00000622702 CLEC4FQ8N1N0 589 aa18.42■□□□□ 0.54
PDLIM2-221ENST00000622702 OR5AK3PQ8NH89 298 aa18.42■□□□□ 0.54
PDLIM2-221ENST00000622702 GIMAP5Q96F15 307 aa18.42■□□□□ 0.54
PDLIM2-221ENST00000622702 GPATCH2Q9NW75 528 aa18.42■□□□□ 0.54
PDLIM2-221ENST00000622702 PRODH2Q9UF12 536 aa18.42■□□□□ 0.54
PDLIM2-221ENST00000622702 BCAP29Q9UHQ4 241 aa18.42■□□□□ 0.54
PDLIM2-221ENST00000622702 CFL2Q9Y281 166 aa18.42■□□□□ 0.54
PDLIM2-221ENST00000622702 EBAG9O00559 213 aa18.41■□□□□ 0.54
PDLIM2-221ENST00000622702 NUDT2P50583 147 aa18.41■□□□□ 0.54
PDLIM2-221ENST00000622702 CLCN2P51788 898 aa18.41■□□□□ 0.54
PDLIM2-221ENST00000622702 ART3Q13508 389 aa18.41■□□□□ 0.54
PDLIM2-221ENST00000622702 TP53BP2Q13625 1128 aa18.41■□□□□ 0.54
PDLIM2-221ENST00000622702 LY6DQ14210 128 aa18.41■□□□□ 0.54
PDLIM2-221ENST00000622702 SZRD1Q7Z422 152 aa18.41■□□□□ 0.54
PDLIM2-221ENST00000622702 C6orf120Q7Z4R8 191 aa18.41■□□□□ 0.54
PDLIM2-221ENST00000622702 APLFQ8IW19 511 aaPredicted RBP18.41■□□□□ 0.54
PDLIM2-221ENST00000622702 TMEM102Q8N9M5 508 aaPredicted RBP18.41■□□□□ 0.54
PDLIM2-221ENST00000622702 OR8K3Q8NH51 312 aa18.41■□□□□ 0.54
PDLIM2-221ENST00000622702 C16orf52Q8NHV5 167 aa18.41■□□□□ 0.54
PDLIM2-221ENST00000622702 WBP1Q96G27 269 aa18.41■□□□□ 0.54
PDLIM2-221ENST00000622702 ANKRD27Q96NW4 1050 aa18.41■□□□□ 0.54
PDLIM2-221ENST00000622702 BBC3Q96PG8 261 aaPredicted RBP18.41■□□□□ 0.54
PDLIM2-221ENST00000622702 ING2Q9H160 280 aa18.41■□□□□ 0.54
PDLIM2-221ENST00000622702 TPT1P8Q9HAU6 139 aa18.41■□□□□ 0.54
PDLIM2-221ENST00000622702 IL1RL2Q9HB29 575 aa18.41■□□□□ 0.54
PDLIM2-221ENST00000622702 HEMK1Q9Y5R4 338 aaPredicted RBP18.41■□□□□ 0.54
PDLIM2-221ENST00000622702 ATXN7O15265 892 aaPredicted RBP18.4■□□□□ 0.54
PDLIM2-221ENST00000622702 KRT75O95678 551 aa18.4■□□□□ 0.54
PDLIM2-221ENST00000622702 HMGN2P05204 90 aaKnown RBP18.4■□□□□ 0.54
PDLIM2-221ENST00000622702 SERPINA7P05543 415 aa18.4■□□□□ 0.54
PDLIM2-221ENST00000622702 PPIBP23284 216 aaKnown RBP18.4■□□□□ 0.54
PDLIM2-221ENST00000622702 CHI3L1P36222 383 aaPredicted RBP18.4■□□□□ 0.54
PDLIM2-221ENST00000622702 MAGEA8P43361 318 aa18.4■□□□□ 0.54
PDLIM2-221ENST00000622702 PRKAG1P54619 331 aa18.4■□□□□ 0.54
PDLIM2-221ENST00000622702 AP2B1P63010 937 aa18.4■□□□□ 0.54
PDLIM2-221ENST00000622702 Q0VFX4 171 aa18.4■□□□□ 0.54
PDLIM2-221ENST00000622702 BNIP1Q12981 228 aa18.4■□□□□ 0.54
PDLIM2-221ENST00000622702 RUNDC3AQ59EK9 446 aa18.4■□□□□ 0.54
PDLIM2-221ENST00000622702 MFSD12Q6NUT3 480 aa18.4■□□□□ 0.54
PDLIM2-221ENST00000622702 C8orf82Q6P1X6 216 aaPredicted RBP18.4■□□□□ 0.54
PDLIM2-221ENST00000622702 ZCCHC12Q6PEW1 402 aa18.4■□□□□ 0.54
PDLIM2-221ENST00000622702 HSDL2Q6YN16 418 aa18.4■□□□□ 0.54
PDLIM2-221ENST00000622702 AMER2Q8N7J2 671 aa18.4■□□□□ 0.54
PDLIM2-221ENST00000622702 EXD3Q8N9H8 876 aa18.4■□□□□ 0.54
PDLIM2-221ENST00000622702 HOXB13Q92826 284 aaPredicted RBP18.4■□□□□ 0.54
PDLIM2-221ENST00000622702 AURKBQ96GD4 344 aaPredicted RBP18.4■□□□□ 0.54
PDLIM2-221ENST00000622702 VSTM2LQ96N03 204 aa18.4■□□□□ 0.54
PDLIM2-221ENST00000622702 GPATCH1Q9BRR8 931 aaKnown RBP18.4■□□□□ 0.54
PDLIM2-221ENST00000622702 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.4■□□□□ 0.54
PDLIM2-221ENST00000622702 TRBV11-1A0A0K0K1C0 115 aa18.39■□□□□ 0.54
PDLIM2-221ENST00000622702 CLIC1O00299 241 aa18.39■□□□□ 0.54
PDLIM2-221ENST00000622702 DNAJB5O75953 348 aa18.39■□□□□ 0.54
PDLIM2-221ENST00000622702 KRT16P08779 473 aa18.39■□□□□ 0.54
PDLIM2-221ENST00000622702 PRIM2P49643 509 aa18.39■□□□□ 0.54
PDLIM2-221ENST00000622702 RRADP55042 308 aa18.39■□□□□ 0.54
PDLIM2-221ENST00000622702 AIMP2Q13155 320 aaKnown RBP18.39■□□□□ 0.54
PDLIM2-221ENST00000622702 CAPRIN1Q14444 709 aaKnown RBP18.39■□□□□ 0.54
PDLIM2-221ENST00000622702 MYBPC3Q14896 1274 aa18.39■□□□□ 0.54
PDLIM2-221ENST00000622702 EBPQ15125 230 aaKnown RBP18.39■□□□□ 0.54
PDLIM2-221ENST00000622702 EXOSC6Q5RKV6 272 aaKnown RBP18.39■□□□□ 0.54
PDLIM2-221ENST00000622702 C9orf40Q8IXQ3 194 aa18.39■□□□□ 0.54
PDLIM2-221ENST00000622702 KBTBD2Q8IY47 623 aa18.39■□□□□ 0.54
PDLIM2-221ENST00000622702 KIF2BQ8N4N8 673 aa18.39■□□□□ 0.54
PDLIM2-221ENST00000622702 NUBPLQ8TB37 319 aa18.39■□□□□ 0.54
PDLIM2-221ENST00000622702 MIPOL1Q8TD10 442 aa18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms