RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 HADHBP55084 474 aaKnown RBP3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 CDH6P55285 790 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 AP1S1P61966 158 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 BCL2L1Q07817 233 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 SGCGQ13326 291 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 FZD2Q14332 565 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 KIR2DS3Q14952 304 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 PAFAH1B3Q15102 231 aaKnown RBP3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 PDK2Q15119 407 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 HADHQ16836 314 aaKnown RBP3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 POM121L1PQ3SYA9 428 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 PLEKHS1Q5SXH7 462 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 CCDC122Q5T0U0 273 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 GFI1BQ5VTD9 330 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 SEL1L3Q68CR1 1132 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 MZT2BQ6NZ67 158 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 TMCO3Q6UWJ1 677 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 PACS1Q6VY07 963 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 MACC1Q6ZN28 852 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 Q6ZSR6 202 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 H2AFVQ71UI9 128 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 PARGQ86W56 976 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 PTOV1Q86YD1 416 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 VSTM4Q8IW00 320 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 SLC22A18ASQ8N1D0 253 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 BBS5Q8N3I7 341 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 RYBPQ8N488 228 aaPredicted RBP3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 TEX26Q8N6G2 289 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 EID2Q8N6I1 236 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 NPWQ8N729 165 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 SPATA3Q8NHX4 192 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 ZNF564Q8TBZ8 553 aaPredicted RBP3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 CXorf40AQ8TE69 158 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 SMPDL3BQ92485 455 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 FAF2Q96CS3 445 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 CNDP2Q96KP4 475 aaKnown RBP3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 C17orf77Q96MU5 243 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 TSGA13Q96PP4 275 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 CSPG4P5Q96PW8 444 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 SLX1AQ9BQ83 275 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 MGME1Q9BQP7 344 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 ZNF670Q9BS34 389 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 HGH1Q9BTY7 390 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 NUP85Q9BW27 656 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 MAK16Q9BXY0 300 aaKnown RBP3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 THAP2Q9H0W7 228 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 HRH4Q9H3N8 390 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 TFB2MQ9H5Q4 396 aaKnown RBP3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 ATP13A3Q9H7F0 1226 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 GPATCH2LQ9NWQ4 482 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 NLGN3Q9NZ94 848 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 PCSK1NQ9UHG2 260 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 ANAPC7Q9UJX3 599 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 TCF19Q9Y242 345 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 CFAP47Q6ZTR5 3102 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 COL6A6A6NMZ7 2263 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 SETXQ7Z333 2677 aaKnown RBP3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 NBEAQ8NFP9 2946 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 BPTFQ12830 3046 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 A0A1W2PQ09 198 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 TRABD2BA6NFA1 517 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 LMO7DNF2Z398 122 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 DFFAO00273 331 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 AQP9O43315 295 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 PRKNO60260 465 aaPredicted RBP3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 RSL1D1O76021 490 aaKnown RBP3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 PIGNO95427 931 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 LCA5LO95447 670 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 KRT7P08729 469 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 TPM1P09493 284 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 MMP9P14780 707 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 TCF4P15884 667 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 ALOX12P18054 663 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 CCNCP24863 283 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 DCTP40126 519 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 THOP1P52888 689 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 RPL26P61254 145 aaKnown RBP3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 IL9RQ01113 521 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 SLC10A7Q0GE19 358 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 RALGDSQ12967 914 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 DPYSL3Q14195 570 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 WSCD2Q2TBF2 565 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 NDUFAF5Q5TEU4 345 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 MARC1Q5VT66 337 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 LRRC38Q5VT99 294 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 NCBP2-AS2Q69YL0 99 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 TXNRD3NBQ6F5E7 133 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 LEKR1Q6ZMV7 388 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 SZRD1Q7Z422 152 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 PTAR1Q7Z6K3 402 aaPredicted RBP3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 GALNT5Q7Z7M9 940 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 OR6K2Q8NGY2 324 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 CTNNBL1Q8WYA6 563 aaPredicted RBP3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 KLK6Q92876 244 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 HDAC11Q96DB2 347 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 CELF6Q96J87 481 aaKnown RBP3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 NSMCE3Q96MG7 304 aa3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 MCCC1Q96RQ3 725 aaPredicted RBP3.32□□□□□ -1.88
CKS1BP3-201ENST00000600888 LYSMD1Q96S90 227 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms