RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 RPS26P11Q5JNZ5 115 aaPredicted RBP12.9□□□□□ -0.34
TPM1-215ENST00000558868 OTUD3Q5T2D3 398 aaPredicted RBP12.9□□□□□ -0.34
TPM1-215ENST00000558868 C6orf52Q5T4I8 152 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 TTLL10Q6ZVT0 673 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 ARHGAP22Q7Z5H3 698 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 CYP4Z1Q86W10 505 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 DHRSXQ8N5I4 330 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 CDRT4Q8N9R6 151 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 IFI44Q8TCB0 444 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 COL21A1Q96P44 957 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 DGAT2Q96PD7 388 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 STACQ99469 402 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 EPYCQ99645 322 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 YIPF4Q9BSR8 244 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 GABARAPL1Q9H0R8 117 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 EQTNQ9NQ60 294 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 FGF21Q9NSA1 209 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 MAT2BQ9NZL9 334 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 NDOR1Q9UHB4 597 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 ABCG2Q9UNQ0 655 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 A0A1B0GX78 115 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 MED19A0JLT2 244 aaPredicted RBP12.89□□□□□ -0.35
TPM1-215ENST00000558868 TTC36A6NLP5 189 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 TMEM229AB2RXF0 380 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 H0YAE9 185 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 CASC3O15234 703 aaKnown RBP12.89□□□□□ -0.35
TPM1-215ENST00000558868 ALBP02768 609 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 CD247P20963 164 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 FBLP22087 321 aaKnown RBP12.89□□□□□ -0.35
TPM1-215ENST00000558868 ALAS2P22557 587 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 PTGER1P34995 402 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 XCR1P46094 333 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 STT3AP46977 705 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 GCGRP47871 477 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 KCNJ5P48544 419 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 NUBP1P53384 320 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 RAD23AP54725 363 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 MAT1AQ00266 395 aaKnown RBP12.89□□□□□ -0.35
TPM1-215ENST00000558868 MERTKQ12866 999 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 DSG2Q14126 1118 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 MAPK11Q15759 364 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 HEPHL1Q6MZM0 1159 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 FAM111BQ6SJ93 734 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 BPHLQ86WA6 291 aaPredicted RBP12.89□□□□□ -0.35
TPM1-215ENST00000558868 GALNT12Q8IXK2 581 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 VWA5B2Q8N398 1253 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 TFAP2CQ92754 450 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 PMM1Q92871 262 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 RIT1Q92963 219 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 FKBP10Q96AY3 582 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 CTHRC1Q96CG8 243 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 ZNF501Q96CX3 271 aaPredicted RBP12.89□□□□□ -0.35
TPM1-215ENST00000558868 ZNF354BQ96LW1 612 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 ZNF300Q96RE9 604 aaPredicted RBP12.89□□□□□ -0.35
TPM1-215ENST00000558868 ADI1Q9BV57 179 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 ALOXE3Q9BYJ1 711 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 PIGUQ9H490 435 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 ZNF304Q9HCX3 659 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 BATF3Q9NR55 127 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 DUSP22Q9NRW4 184 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 NDUFAF4Q9P032 175 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 RALYQ9UKM9 306 aaKnown RBP12.89□□□□□ -0.35
TPM1-215ENST00000558868 ATXN7L1Q9ULK2 861 aaPredicted RBP12.89□□□□□ -0.35
TPM1-215ENST00000558868 SAMHD1Q9Y3Z3 626 aaKnown RBP12.89□□□□□ -0.35
TPM1-215ENST00000558868 AK5Q9Y6K8 562 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 ENPP4Q9Y6X5 453 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 PCDH15Q96QU1 1955 aa12.89□□□□□ -0.35
TPM1-215ENST00000558868 SDK1Q7Z5N4 2213 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 CHD6Q8TD26 2715 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 IGHV5-10-1A0A0J9YXX1 117 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 A0A1W2PQM1 296 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 DYRK3O43781 588 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 DNAJB5O75953 348 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 ALPLP05186 524 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 ALPPP05187 535 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 FESP07332 822 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 CHRM4P08173 479 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 HBQ1P09105 142 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 THRBP10828 461 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 RHCEP18577 417 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 CDH2P19022 906 aaPredicted RBP12.88□□□□□ -0.35
TPM1-215ENST00000558868 CAPGP40121 348 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 GRK6P43250 576 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 SMIM11AP58511 58 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 MGAT2Q10469 447 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 TRA2AQ13595 282 aaKnown RBP eCLIP12.88□□□□□ -0.35
TPM1-215ENST00000558868 ZNHIT3Q15649 155 aaPredicted RBP12.88□□□□□ -0.35
TPM1-215ENST00000558868 ARHGAP11BQ3KRB8 267 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 IQCCQ4KMZ1 466 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 TRMT12Q53H54 448 aaKnown RBP12.88□□□□□ -0.35
TPM1-215ENST00000558868 ZNF574Q6ZN55 896 aaPredicted RBP12.88□□□□□ -0.35
TPM1-215ENST00000558868 SMYD1Q8NB12 490 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 SLC9A6Q92581 669 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 GATA6Q92908 595 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 SLC35A4Q96G79 324 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 CNBD2Q96M20 576 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 CNTNAP3BQ96NU0 1288 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 GFM1Q96RP9 751 aaKnown RBP12.88□□□□□ -0.35
TPM1-215ENST00000558868 PIP5K1AQ99755 562 aa12.88□□□□□ -0.35
TPM1-215ENST00000558868 YIPF2Q9BWQ6 316 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms