RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 OR51B5Q9H339 312 aa16.62■□□□□ 0.25
RAB40C-205ENST00000539661 C11orf49Q9H6J7 331 aa16.62■□□□□ 0.25
RAB40C-205ENST00000539661 CYSLTR2Q9NS75 346 aa16.62■□□□□ 0.25
RAB40C-205ENST00000539661 CUEDC1Q9NWM3 386 aaPredicted RBP16.62■□□□□ 0.25
RAB40C-205ENST00000539661 SEC14L3Q9UDX4 400 aa16.62■□□□□ 0.25
RAB40C-205ENST00000539661 DYRK1BQ9Y463 629 aa16.62■□□□□ 0.25
RAB40C-205ENST00000539661 TMEM88BA6NKF7 163 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 EFCAB14O75071 495 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 NCR1O76036 304 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 NAGAP17050 411 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 CNTN1Q12860 1018 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 BAMBIQ13145 260 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 GRK1Q15835 563 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 ARHGAP15Q53QZ3 475 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 BCL2L15Q5TBC7 163 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 SLC8B1Q6J4K2 584 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 PRSS55Q6UWB4 352 aaPredicted RBP16.61■□□□□ 0.25
RAB40C-205ENST00000539661 TIGD4Q8IY51 512 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 ZNF655Q8N720 491 aaPredicted RBP16.61■□□□□ 0.25
RAB40C-205ENST00000539661 OR5M3Q8NGP4 307 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 RAET1EQ8TD07 263 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 FOPNLQ96NB1 174 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 SLC38A2Q96QD8 506 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 THAP7Q9BT49 309 aaPredicted RBP16.61■□□□□ 0.25
RAB40C-205ENST00000539661 CPEB1Q9BZB8 566 aaKnown RBP16.61■□□□□ 0.25
RAB40C-205ENST00000539661 DNMT3AQ9Y6K1 912 aaPredicted RBP16.61■□□□□ 0.25
RAB40C-205ENST00000539661 KIF26AQ9ULI4 1882 aaPredicted RBP16.61■□□□□ 0.25
RAB40C-205ENST00000539661 ADAMTS4O75173 837 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 RB1P06400 928 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 OR12D1P0DN82 309 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 RFX3P48380 749 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 HSF2Q03933 536 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 PIN1Q13526 163 aaPredicted RBP16.61■□□□□ 0.25
RAB40C-205ENST00000539661 LRRC32Q14392 662 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 CCDC85BQ15834 202 aaPredicted RBP16.61■□□□□ 0.25
RAB40C-205ENST00000539661 SLC27A4Q6P1M0 643 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 Q6ZNB5 142 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 SLC9A6Q92581 669 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 KCTD12Q96CX2 325 aaKnown RBP16.61■□□□□ 0.25
RAB40C-205ENST00000539661 TRMT2BQ96GJ1 504 aaKnown RBP16.61■□□□□ 0.25
RAB40C-205ENST00000539661 RADILQ96JH8 1075 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 AIFM2Q9BRQ8 373 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 TMED9Q9BVK6 235 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 NEUROD4Q9HD90 331 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 B4GALT6Q9UBX8 382 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 CD84Q9UIB8 345 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 TET1Q8NFU7 2136 aa16.61■□□□□ 0.25
RAB40C-205ENST00000539661 SHISA3A0PJX4 238 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 ANKDD1BA6NHY2 528 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 ANHXE9PGG2 379 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 SAP18O00422 153 aaKnown RBP16.6■□□□□ 0.25
RAB40C-205ENST00000539661 GREM1O60565 184 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 TBX19O60806 448 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 RBMS1P29558 406 aaKnown RBP16.6■□□□□ 0.25
RAB40C-205ENST00000539661 TJAP1Q5JTD0 557 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 COMMD7Q86VX2 200 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 KLHL36Q8N4N3 616 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 ZNF366Q8N895 744 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 ZFP41Q8N8Y5 198 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 FBXO15Q8NCQ5 510 aaPredicted RBP16.6■□□□□ 0.25
RAB40C-205ENST00000539661 MORN4Q8NDC4 146 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 OR11H7Q8NGC8 314 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 OR52N1Q8NH53 320 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 TEX47Q8TBZ9 253 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 RFKQ969G6 155 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 BTBD1Q9H0C5 482 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 ABCG5Q9H222 651 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 CLEC4MQ9H2X3 399 aaPredicted RBP16.6■□□□□ 0.25
RAB40C-205ENST00000539661 TBC1D17Q9HA65 648 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 SLCO1C1Q9NYB5 712 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 ZNF222Q9UK12 451 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 NUBP2Q9Y5Y2 271 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 CACNG2Q9Y698 323 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 A0A1B0GVI7 797 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 RPS10-NUDT3A0A1W2PQS6 291 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 SLC5A10A0PJK1 596 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 TMEM202A6NGA9 273 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 ADAM12O43184 909 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 APOL3O95236 402 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 LALBAP00709 142 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 SOX18P35713 384 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 MTNR1BP49286 362 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 DCDC1P59894 354 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 RPS26P62854 115 aaKnown RBP16.6■□□□□ 0.25
RAB40C-205ENST00000539661 POU6F2P78424 691 aaPredicted RBP16.6■□□□□ 0.25
RAB40C-205ENST00000539661 SNTA1Q13424 505 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 AANATQ16613 207 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 MPPE1Q53F39 396 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 RAET1GQ6H3X3 334 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 TMEM65Q6PI78 240 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 IQCHQ86VS3 1027 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 TBC1D19Q8N5T2 526 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 ESX1Q8N693 406 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 ADAMTS19Q8TE59 1207 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 OTUB1Q96FW1 271 aaPredicted RBP16.6■□□□□ 0.25
RAB40C-205ENST00000539661 DOCK6Q96HP0 2047 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 DPAGT1Q9H3H5 408 aa16.6■□□□□ 0.25
RAB40C-205ENST00000539661 NINQ8N4C6 2090 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 NPPBP16860 134 aa16.59■□□□□ 0.25
RAB40C-205ENST00000539661 AHCYP23526 432 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms