RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 DCTN4Q9UJW0 460 aa16.8■□□□□ 0.28
VEGFA-222ENST00000520948 A0A087WV62 115 aa16.79■□□□□ 0.28
VEGFA-222ENST00000520948 CDK2AP1O14519 115 aa16.79■□□□□ 0.28
VEGFA-222ENST00000520948 CLNS1AP54105 237 aaKnown RBP16.79■□□□□ 0.28
VEGFA-222ENST00000520948 MRPS35P82673 323 aaKnown RBP16.79■□□□□ 0.28
VEGFA-222ENST00000520948 SRSF11Q05519 484 aaKnown RBP16.79■□□□□ 0.28
VEGFA-222ENST00000520948 MEP1AQ16819 746 aa16.79■□□□□ 0.28
VEGFA-222ENST00000520948 RNF111Q6ZNA4 994 aa16.79■□□□□ 0.28
VEGFA-222ENST00000520948 LINC00696Q6ZRV3 163 aa16.79■□□□□ 0.28
VEGFA-222ENST00000520948 ZNF551Q7Z340 670 aaPredicted RBP16.79■□□□□ 0.28
VEGFA-222ENST00000520948 SLC5A8Q8N695 610 aa16.79■□□□□ 0.28
VEGFA-222ENST00000520948 PSMA8Q8TAA3 256 aa16.79■□□□□ 0.28
VEGFA-222ENST00000520948 NUBPLQ8TB37 319 aa16.79■□□□□ 0.28
VEGFA-222ENST00000520948 HAS2Q92819 552 aa16.79■□□□□ 0.28
VEGFA-222ENST00000520948 ELP4Q96EB1 424 aa16.79■□□□□ 0.28
VEGFA-222ENST00000520948 ZBED6CLQ96FA7 236 aaPredicted RBP16.79■□□□□ 0.28
VEGFA-222ENST00000520948 MARK4Q96L34 752 aa16.79■□□□□ 0.28
VEGFA-222ENST00000520948 DUSP26Q9BV47 211 aa16.79■□□□□ 0.28
VEGFA-222ENST00000520948 RNF32Q9H0A6 362 aa16.79■□□□□ 0.28
VEGFA-222ENST00000520948 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.79■□□□□ 0.284e-7■■□□□ 11.7
VEGFA-222ENST00000520948 ZIM2Q9NZV7 527 aa16.79■□□□□ 0.28
VEGFA-222ENST00000520948 NTMQ9P121 344 aa16.79■□□□□ 0.28
VEGFA-222ENST00000520948 ERVK-11Q9UQG0 969 aa16.79■□□□□ 0.28
VEGFA-222ENST00000520948 A0A1W2PRB8 838 aa16.78■□□□□ 0.28
VEGFA-222ENST00000520948 E9PBE3 544 aa16.78■□□□□ 0.28
VEGFA-222ENST00000520948 BCAS2O75934 225 aaPredicted RBP16.78■□□□□ 0.28
VEGFA-222ENST00000520948 TROVE2P10155 538 aaKnown RBP eCLIP16.78■□□□□ 0.28
VEGFA-222ENST00000520948 GPX3P22352 226 aa16.78■□□□□ 0.28
VEGFA-222ENST00000520948 EMDP50402 254 aa16.78■□□□□ 0.28
VEGFA-222ENST00000520948 MANFP55145 182 aaKnown RBP16.78■□□□□ 0.28
VEGFA-222ENST00000520948 IRX1P78414 480 aaPredicted RBP16.78■□□□□ 0.28
VEGFA-222ENST00000520948 ZNF169Q14929 603 aaPredicted RBP16.78■□□□□ 0.28
VEGFA-222ENST00000520948 EXOSC7Q15024 291 aaKnown RBP16.78■□□□□ 0.28
VEGFA-222ENST00000520948 EBPQ15125 230 aaKnown RBP16.78■□□□□ 0.28
VEGFA-222ENST00000520948 DPY19L1Q2PZI1 675 aa16.78■□□□□ 0.28
VEGFA-222ENST00000520948 C6orf163Q5TEZ5 329 aa16.78■□□□□ 0.28
VEGFA-222ENST00000520948 ABHD17BQ5VST6 288 aa16.78■□□□□ 0.28
VEGFA-222ENST00000520948 OR4F3Q6IEY1 312 aa16.78■□□□□ 0.28
VEGFA-222ENST00000520948 ZNF441Q8N8Z8 693 aa16.78■□□□□ 0.28
VEGFA-222ENST00000520948 OR5L2Q8NGL0 311 aa16.78■□□□□ 0.28
VEGFA-222ENST00000520948 C16orf52Q8NHV5 167 aa16.78■□□□□ 0.28
VEGFA-222ENST00000520948 ADIPOR1Q96A54 375 aa16.78■□□□□ 0.28
VEGFA-222ENST00000520948 CHMP6Q96FZ7 201 aa16.78■□□□□ 0.28
VEGFA-222ENST00000520948 EPS8L2Q9H6S3 715 aa16.78■□□□□ 0.28
VEGFA-222ENST00000520948 ANKRA2Q9H9E1 313 aa16.78■□□□□ 0.28
VEGFA-222ENST00000520948 LIN28AQ9H9Z2 209 aaKnown RBP16.78■□□□□ 0.28
VEGFA-222ENST00000520948 MYOTQ9UBF9 498 aa16.78■□□□□ 0.28
VEGFA-222ENST00000520948 TEKT2Q9UIF3 430 aa16.78■□□□□ 0.28
VEGFA-222ENST00000520948 C19orf53Q9UNZ5 99 aaPredicted RBP16.78■□□□□ 0.28
VEGFA-222ENST00000520948 DIDO1Q9BTC0 2240 aaKnown RBP16.77■□□□□ 0.28
VEGFA-222ENST00000520948 A0A0G2JND7 137 aa16.77■□□□□ 0.28
VEGFA-222ENST00000520948 UPK1AO00322 258 aa16.77■□□□□ 0.28
VEGFA-222ENST00000520948 SLC22A3O75751 556 aa16.77■□□□□ 0.28
VEGFA-222ENST00000520948 PSMG1O95456 288 aa16.77■□□□□ 0.28
VEGFA-222ENST00000520948 LSP1P33241 339 aa16.77■□□□□ 0.28
VEGFA-222ENST00000520948 ATP4BP51164 291 aa16.77■□□□□ 0.28
VEGFA-222ENST00000520948 NME5P56597 212 aa16.77■□□□□ 0.28
VEGFA-222ENST00000520948 RPS6KA2Q15349 733 aa16.77■□□□□ 0.28
VEGFA-222ENST00000520948 PGS1Q32NB8 556 aa16.77■□□□□ 0.28
VEGFA-222ENST00000520948 PIGGQ5H8A4 983 aa16.77■□□□□ 0.28
VEGFA-222ENST00000520948 SPANXN4Q5MJ08 99 aa16.77■□□□□ 0.28
VEGFA-222ENST00000520948 METTL21CQ5VZV1 264 aa16.77■□□□□ 0.28
VEGFA-222ENST00000520948 BEST3Q8N1M1 668 aa16.77■□□□□ 0.28
VEGFA-222ENST00000520948 OR2L13Q8N349 312 aa16.77■□□□□ 0.28
VEGFA-222ENST00000520948 GLB1L3Q8NCI6 653 aaPredicted RBP16.77■□□□□ 0.28
VEGFA-222ENST00000520948 CATSPER1Q8NEC5 780 aa16.77■□□□□ 0.28
VEGFA-222ENST00000520948 OR52R1Q8NGF1 315 aa16.77■□□□□ 0.28
VEGFA-222ENST00000520948 ZFP28Q8NHY6 868 aa16.77■□□□□ 0.28
VEGFA-222ENST00000520948 THAP3Q8WTV1 239 aaPredicted RBP16.77■□□□□ 0.28
VEGFA-222ENST00000520948 FAR1Q8WVX9 515 aa16.77■□□□□ 0.28
VEGFA-222ENST00000520948 OR5P2Q8WZ92 322 aa16.77■□□□□ 0.28
VEGFA-222ENST00000520948 TP53INP1Q96A56 240 aa16.77■□□□□ 0.28
VEGFA-222ENST00000520948 TMEM120AQ9BXJ8 343 aa16.77■□□□□ 0.28
VEGFA-222ENST00000520948 WWTR1Q9GZV5 400 aa16.77■□□□□ 0.28
VEGFA-222ENST00000520948 ZNF385DQ9H6B1 395 aa16.77■□□□□ 0.28
VEGFA-222ENST00000520948 TRIM45Q9H8W5 580 aaPredicted RBP16.77■□□□□ 0.28
VEGFA-222ENST00000520948 SIRT3Q9NTG7 399 aaPredicted RBP16.77■□□□□ 0.28
VEGFA-222ENST00000520948 KLHL14Q9P2G3 628 aa16.77■□□□□ 0.28
VEGFA-222ENST00000520948 DTX4Q9Y2E6 619 aa16.77■□□□□ 0.28
VEGFA-222ENST00000520948 YARS2Q9Y2Z4 477 aaKnown RBP16.77■□□□□ 0.28
VEGFA-222ENST00000520948 ZGRF1Q86YA3 2104 aa16.76■□□□□ 0.27
VEGFA-222ENST00000520948 RNASET2O00584 256 aaKnown RBP16.76■□□□□ 0.27
VEGFA-222ENST00000520948 ZNF354AO60765 605 aaPredicted RBP16.76■□□□□ 0.27
VEGFA-222ENST00000520948 ZG16O60844 167 aa16.76■□□□□ 0.27
VEGFA-222ENST00000520948 NADKO95544 446 aaPredicted RBP16.76■□□□□ 0.27
VEGFA-222ENST00000520948 WDPCPO95876 746 aa16.76■□□□□ 0.27
VEGFA-222ENST00000520948 EDN3P14138 238 aa16.76■□□□□ 0.27
VEGFA-222ENST00000520948 EFNA1P20827 205 aaPredicted RBP16.76■□□□□ 0.27
VEGFA-222ENST00000520948 TRHRP34981 398 aaPredicted RBP16.76■□□□□ 0.27
VEGFA-222ENST00000520948 MC3RP41968 323 aa16.76■□□□□ 0.27
VEGFA-222ENST00000520948 KIR3DL1P43629 444 aa16.76■□□□□ 0.27
VEGFA-222ENST00000520948 CDK9P50750 372 aaKnown RBP16.76■□□□□ 0.27
VEGFA-222ENST00000520948 SEC24CP53992 1094 aa16.76■□□□□ 0.27
VEGFA-222ENST00000520948 HSPB3Q12988 150 aa16.76■□□□□ 0.27
VEGFA-222ENST00000520948 PAOXQ6QHF9 649 aa16.76■□□□□ 0.27
VEGFA-222ENST00000520948 TMEM107Q6UX40 140 aa16.76■□□□□ 0.27
VEGFA-222ENST00000520948 C16orf47Q6ZP98 133 aaPredicted RBP16.76■□□□□ 0.27
VEGFA-222ENST00000520948 SLC29A4Q7RTT9 530 aa16.76■□□□□ 0.27
VEGFA-222ENST00000520948 FUNDC1Q8IVP5 155 aa16.76■□□□□ 0.27
VEGFA-222ENST00000520948 MIER2Q8N344 545 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms