RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 B4GALT5O43286 388 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 PRAF2O60831 178 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 PMS2P2O95744 297 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 LY6G6DO95868 133 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 FSHBP01225 129 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 IGLV3-19P01714 112 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 CPA3P15088 417 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 AREGP15514 252 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 TCN2P20062 427 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 AHCYP23526 432 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 DGKAP23743 735 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 CETN2P41208 172 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 PCYT1AP49585 367 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 HOXA1P49639 335 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 UCP2P55851 309 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 YBEYP58557 167 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 PITX1P78337 314 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 LCP2Q13094 533 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 MYBPHQ13203 477 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 GPR17Q13304 367 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 PDK1Q15118 436 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 LBHQ53QV2 105 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 CCNYL2Q5T2Q4 361 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 AGAP6Q5VW22 663 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 FAM46CQ5VWP2 391 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 PODNL1Q6PEZ8 512 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 RHBDF2Q6PJF5 856 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 CD164L2Q6UWJ8 174 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 PLXDC2Q6UX71 529 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 CD300LGQ6UXG3 332 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 B3GLCTQ6Y288 498 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 TECPR1Q7Z6L1 1165 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 TMEM150AQ86TG1 271 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 CNPY4Q8N129 248 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 PRSS35Q8N3Z0 413 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 SLC25A45Q8N413 288 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 ZNF114Q8NC26 417 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 KIAA0895Q8NCT3 520 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 OR13J1Q8NGT2 312 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 SLC20A1Q8WUM9 679 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 FIG4Q92562 907 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 TMEM186Q96B77 213 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 NSMCE2Q96MF7 247 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 GDAP1L1Q96MZ0 367 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 NTPCRQ9BSD7 190 aaKnown RBP4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 LRRC1Q9BTT6 524 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 SLC2A11Q9BYW1 496 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 SPRTNQ9H040 489 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 DDX47Q9H0S4 455 aaKnown RBP4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 TMPRSS5Q9H3S3 457 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 CUEDC2Q9H467 287 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 C10orf88Q9H8K7 445 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 APOBEC3GQ9HC16 384 aaKnown RBP4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 SYTL2Q9HCH5 934 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 NLGN3Q9NZ94 848 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 PTGFRNQ9P2B2 879 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 KCNN3Q9UGI6 736 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 FETUBQ9UGM5 382 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 SLC12A6Q9UHW9 1150 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 ING1Q9UK53 422 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 KCNJ14Q9UNX9 436 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 FOXA2Q9Y261 457 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 OR2W1Q9Y3N9 320 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 KIF3AQ9Y496 699 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 ANAPC1Q9H1A4 1944 aa4.27□□□□□ -1.73
HMGB1P23-201ENST00000518743 TRAV18A0A075B6X5 111 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 A0A0G2JPF8 293 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 TEX13DA0A0J9YY54 714 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 HNRNPCL3B7ZW38 293 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 SYNGR3O43761 229 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 MAGEC1O60732 1142 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 LDB3O75112 727 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 PRKRAO75569 313 aaKnown RBP4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 GRAP2O75791 330 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 WISP2O76076 250 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 REC8O95072 547 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 SERPING1P05155 500 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 IGHV4-34P06331 123 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 ANKRD34CP0C6C1 535 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 HNRNPCL4P0DMR1 293 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 CCNA2P20248 432 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 RABIFP47224 123 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 NR2C2P49116 596 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 HERV-K104P61576 105 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 SLC3A1Q07837 685 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 PPP1R8Q12972 351 aaKnown RBP4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 PRKAA1Q13131 559 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 TFDP1Q14186 410 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 ZNF630Q2M218 657 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 XKR3Q5GH77 459 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 BTNL8Q6UX41 500 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 MFSD7Q6UXD7 560 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 GFRALQ6UXV0 394 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 C16orf47Q6ZP98 133 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 LCA5Q86VQ0 697 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 TMEM219Q86XT9 240 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 TMEM126BQ8IUX1 230 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 AQP12AQ8IXF9 295 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 SFRP1Q8N474 314 aa4.26□□□□□ -1.73
HMGB1P23-201ENST00000518743 NEK11Q8NG66 645 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms