RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 MAN2C1Q9NTJ4 1040 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 SEC14L3Q9UDX4 400 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 HS3ST2Q9Y278 367 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 EXOGQ9Y2C4 368 aaKnown RBP16.76■□□□□ 0.27
NUP54-205ENST00000507257 RPS10-NUDT3A0A1W2PQS6 291 aa16.75■□□□□ 0.27
NUP54-205ENST00000507257 SHISA3A0PJX4 238 aa16.75■□□□□ 0.27
NUP54-205ENST00000507257 HMGN4O00479 90 aa16.75■□□□□ 0.27
NUP54-205ENST00000507257 TGFB1P01137 390 aa16.75■□□□□ 0.27
NUP54-205ENST00000507257 IFNA7P01567 189 aa16.75■□□□□ 0.27
NUP54-205ENST00000507257 IGHA1P01876 353 aa16.75■□□□□ 0.27
NUP54-205ENST00000507257 DDCP20711 480 aa16.75■□□□□ 0.27
NUP54-205ENST00000507257 PRLHRP49683 370 aa16.75■□□□□ 0.27
NUP54-205ENST00000507257 TBPL1P62380 186 aa16.75■□□□□ 0.27
NUP54-205ENST00000507257 SHC2P98077 582 aa16.75■□□□□ 0.27
NUP54-205ENST00000507257 CCSAPQ6IQ19 270 aaPredicted RBP16.75■□□□□ 0.27
NUP54-205ENST00000507257 FAM83HQ6ZRV2 1179 aaPredicted RBP16.75■□□□□ 0.27
NUP54-205ENST00000507257 CPXM2Q8N436 756 aa16.75■□□□□ 0.27
NUP54-205ENST00000507257 FIBINQ8TAL6 211 aa16.75■□□□□ 0.27
NUP54-205ENST00000507257 RAET1EQ8TD07 263 aa16.75■□□□□ 0.27
NUP54-205ENST00000507257 ZNF480Q8WV37 535 aa16.75■□□□□ 0.27
NUP54-205ENST00000507257 NR4A3Q92570 626 aa16.75■□□□□ 0.27
NUP54-205ENST00000507257 PRRC1Q96M27 445 aa16.75■□□□□ 0.27
NUP54-205ENST00000507257 ZNF649Q9BS31 505 aa16.75■□□□□ 0.27
NUP54-205ENST00000507257 FNDC11Q9BVV2 318 aa16.75■□□□□ 0.27
NUP54-205ENST00000507257 OR51B5Q9H339 312 aa16.75■□□□□ 0.27
NUP54-205ENST00000507257 PRM3Q9NNZ6 103 aa16.75■□□□□ 0.27
NUP54-205ENST00000507257 EXTL2Q9UBQ6 330 aa16.75■□□□□ 0.27
NUP54-205ENST00000507257 LIPT1Q9Y234 373 aa16.75■□□□□ 0.27
NUP54-205ENST00000507257 NUBP2Q9Y5Y2 271 aa16.75■□□□□ 0.27
NUP54-205ENST00000507257 NUP210Q8TEM1 1887 aaPredicted RBP16.75■□□□□ 0.27
NUP54-205ENST00000507257 TMEM202A6NGA9 273 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 ANHXE9PGG2 379 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 UBXN7O94888 489 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 OLFM2O95897 454 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 LALBAP00709 142 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 ELK1P19419 428 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 BTCP35070 178 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 POLR2LP62875 67 aaKnown RBP16.74■□□□□ 0.27
NUP54-205ENST00000507257 HSF2Q03933 536 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 FOXD4Q12950 439 aaPredicted RBP16.74■□□□□ 0.27
NUP54-205ENST00000507257 PIN1Q13526 163 aaPredicted RBP16.74■□□□□ 0.27
NUP54-205ENST00000507257 HBMQ6B0K9 141 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 TNFAIP8L2Q6P589 184 aaPredicted RBP16.74■□□□□ 0.27
NUP54-205ENST00000507257 KLHL36Q8N4N3 616 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 ZNF366Q8N895 744 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 OR11H7Q8NGC8 314 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 TEX47Q8TBZ9 253 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 ZNF275Q9NSD4 429 aaPredicted RBP16.74■□□□□ 0.27
NUP54-205ENST00000507257 MED17Q9NVC6 651 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 SLCO1C1Q9NYB5 712 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 COPZ2Q9P299 210 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 SLC9A8Q9Y2E8 581 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 FKBP7Q9Y680 259 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 CARNS1A5YM72 827 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 ANKDD1BA6NHY2 528 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 FAM170BA6NMN3 283 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 SEPT4O43236 478 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 LRRTM2O43300 516 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 ATG13O75143 517 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 MTX2O75431 263 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 POP4O95707 220 aaKnown RBP16.74■□□□□ 0.27
NUP54-205ENST00000507257 AHCYP23526 432 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 CST5P28325 142 aaPredicted RBP16.74■□□□□ 0.27
NUP54-205ENST00000507257 PLD1Q13393 1074 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 MADCAM1Q13477 382 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 KCNA10Q16322 511 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 ZNF284Q2VY69 593 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 EOGTQ5NDL2 527 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 RAET1GQ6H3X3 334 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 C22orf39Q6P5X5 142 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 NXPE4Q6UWF7 544 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 C17orf99Q6UX52 265 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 TAS1R1Q7RTX1 841 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 C6orf120Q7Z4R8 191 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 LUZP2Q86TE4 346 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 OAFQ86UD1 273 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 OR8H3Q8N146 312 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 ZNF655Q8N720 491 aaPredicted RBP16.74■□□□□ 0.27
NUP54-205ENST00000507257 PHF21AQ96BD5 680 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 NACC2Q96BF6 587 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 THAP7Q9BT49 309 aaPredicted RBP16.74■□□□□ 0.27
NUP54-205ENST00000507257 ACAT2Q9BWD1 397 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 SAP130Q9H0E3 1048 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 HDHD2Q9H0R4 259 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 KCNN2Q9H2S1 579 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 AHSPQ9NZD4 102 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 CACNG2Q9Y698 323 aa16.74■□□□□ 0.27
NUP54-205ENST00000507257 I3L521 148 aa16.73■□□□□ 0.27
NUP54-205ENST00000507257 CASC3O15234 703 aaKnown RBP16.73■□□□□ 0.27
NUP54-205ENST00000507257 TSPAN6O43657 245 aa16.73■□□□□ 0.27
NUP54-205ENST00000507257 LZTS3O60299 673 aaPredicted RBP16.73■□□□□ 0.27
NUP54-205ENST00000507257 C1orf105O95561 183 aa16.73■□□□□ 0.27
NUP54-205ENST00000507257 GALTP07902 379 aa16.73■□□□□ 0.27
NUP54-205ENST00000507257 PEPDP12955 493 aa16.73■□□□□ 0.27
NUP54-205ENST00000507257 IFNGR2P38484 337 aa16.73■□□□□ 0.27
NUP54-205ENST00000507257 SLC6A11P48066 632 aa16.73■□□□□ 0.27
NUP54-205ENST00000507257 EPHA4P54764 986 aa16.73■□□□□ 0.27
NUP54-205ENST00000507257 CSTF1Q05048 431 aaKnown RBP16.73■□□□□ 0.27
NUP54-205ENST00000507257 SUZ12Q15022 739 aaKnown RBP16.73■□□□□ 0.27
NUP54-205ENST00000507257 MPPE1Q53F39 396 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms